FFCP PHASE1:Hg19::chr17:61560490..61560500,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr17:61560490..61560500,+ | |||
|id=chr17:61560490..61560500,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002188;1.81e-23;5!CL:1000746;4.36e-17;7!CL:1000612;4.36e-17;7!CL:0002615;9.90e-11;3!CL:0002681;2.13e-10;12!CL:0002584;2.13e-10;12!CL:1000449;1.65e-08;15!CL:1000497;1.29e-07;17!CL:0002518;1.29e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.61e-23,5;CL:1000746,4.02e-17,7;CL:1000612,4.02e-17,7;CL:0002615,1.20e-10,3;CL:0002681,2.03e-10,12;CL:0002584,2.03e-10,12;CL:1000449,1.59e-08,15;CL:1000497,1.25e-07,17;CL:0002518,1.25e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.98e-30;1!UBERON:0007297;1.33e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!1.47e-08!4;UBERON:0002435!1.47e-08!4;UBERON:0000204!1.47e-08!4;UBERON:0010082!1.47e-08!4;UBERON:0006947!6.41e-08!3;UBERON:0004054!6.41e-08!3;UBERON:0003135!4.13e-07!11;UBERON:0005383!4.36e-07!3;UBERON:0005382!4.36e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;9.98e-30;1!UBERON:0006868;9.98e-30;1!UBERON:0002108;1.14e-23;4!UBERON:0000074;4.36e-17;7!UBERON:0001229;4.36e-17;7!UBERON:0006947;7.42e-11;3!UBERON:0004054;7.42e-11;3!UBERON:0002114;9.90e-11;2!UBERON:0001225;2.13e-10;12!UBERON:0008987;2.13e-10;12!UBERON:0001851;1.65e-08;15!UBERON:0006555;1.65e-08;15!UBERON:0000353;1.65e-08;15!UBERON:0004819;1.65e-08;15!UBERON:0001285;1.65e-08;15!UBERON:0007684;1.65e-08;15!UBERON:0005904;1.82e-08;4!UBERON:0000160;2.68e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,9.99e-30,1;UBERON:0006868,9.99e-30,1;UBERON:0000080,6.20e-29,9;UBERON:0002120,6.20e-29,9;UBERON:0004875,6.20e-29,9;UBERON:0005721,6.20e-29,9;UBERON:0005754,6.20e-29,9;UBERON:0007297,6.20e-29,9;UBERON:0004876,7.72e-24,11;UBERON:0002108,1.28e-23,4;UBERON:0003887,6.33e-22,12;UBERON:0010532,4.02e-17,7;UBERON:0000074,4.02e-17,7;UBERON:0001229,4.02e-17,7;UBERON:0001230,4.02e-17,7;UBERON:0003220,4.02e-17,7;UBERON:0005749,4.02e-17,7;UBERON:0004199,4.02e-17,7;UBERON:0004209,4.02e-17,7;UBERON:0004198,4.02e-17,7;UBERON:0005103,4.07e-15,8;UBERON:0000083,4.07e-15,8;UBERON:0009201,4.07e-15,8;UBERON:0006553,4.07e-15,8;UBERON:0003074,4.07e-15,8;UBERON:0003060,4.07e-15,8;UBERON:0000058,3.79e-14,19;UBERON:0006947,7.42e-11,3;UBERON:0004054,7.42e-11,3;UBERON:0002114,1.09e-10,2;UBERON:0002113,1.55e-10,26;UBERON:0003918,1.55e-10,26;UBERON:0011143,1.55e-10,26;UBERON:0005095,1.55e-10,26;UBERON:0007687,1.55e-10,26;UBERON:0001225,2.03e-10,12;UBERON:0008987,2.03e-10,12;UBERON:0003064,7.81e-10,28;UBERON:0000489,6.01e-09,31;UBERON:0003886,7.27e-09,54;UBERON:0001851,1.59e-08,15;UBERON:0004211,1.59e-08,15;UBERON:0009773,1.59e-08,15;UBERON:0000353,1.59e-08,15;UBERON:0001231,1.59e-08,15;UBERON:0001285,1.59e-08,15;UBERON:0007684,1.59e-08,15;UBERON:0004208,1.59e-08,15;UBERON:0005904,1.82e-08,4;UBERON:0006555,4.74e-08,16;UBERON:0004819,4.74e-08,16;UBERON:0002417,5.07e-08,60;UBERON:0000916,5.07e-08,60;UBERON:0002553,6.76e-08,61;UBERON:0000160,2.77e-07,17 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.348259474598534,1.86141144726411,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.460511024178389,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0.242780379534093,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.599428828746391,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0.554805861502613,0,0.251567901752575,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,4.55327532836874,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr17:61560490..61560500,+ | |||
}} |
Revision as of 16:44, 20 January 2014
Short description: | p@chr17:61560490..61560500, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:61560490..61560500, + |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.61e-23 | 5 |
glomerular cell | 4.02e-17 | 7 |
kidney corpuscule cell | 4.02e-17 | 7 |
adipocyte of omentum tissue | 1.20e-10 | 3 |
kidney cortical cell | 2.03e-10 | 12 |
renal cortical epithelial cell | 2.03e-10 | 12 |
epithelial cell of nephron | 1.59e-08 | 15 |
kidney cell | 1.25e-07 | 17 |
kidney epithelial cell | 1.25e-07 | 17 |