FFCP PHASE1:Hg19::chr17:75446672..75446686,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UHD8 | |||
|association_with_transcript=59bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end | |||
|coexpression_cluster_id=C3687 | |||
|description=CAGE_peak_18_at_SEPT9_5end | |||
|id=chr17:75446672..75446686,+ | |||
|ontology_enrichment_celltype=CL:0002087!7.09e-21!119;CL:0000738!2.59e-19!140;CL:0002031!2.01e-17!124;CL:0000542!1.76e-15!53;CL:0000051!1.76e-15!53;CL:0000838!4.78e-15!52;CL:0000988!3.17e-14!182;CL:0000037!3.50e-12!172;CL:0000566!3.50e-12!172;CL:0002032!6.69e-11!165;CL:0000837!6.69e-11!165;CL:0002057!1.74e-10!42;CL:0000945!2.18e-09!24;CL:0000826!2.18e-09!24;CL:0000860!7.94e-09!45;CL:0000084!4.53e-08!25;CL:0000827!4.53e-08!25;CL:0000791!3.68e-07!18;CL:0000789!3.68e-07!18;CL:0002420!3.68e-07!18;CL:0002419!3.68e-07!18;CL:0000790!3.68e-07!18;CL:0002393!4.77e-07!9;CL:0002397!4.77e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.92e-10;10!CL:0000084;9.06e-09;25!CL:0002087;9.60e-08;104!CL:0000542;2.41e-07;53!CL:0000669;3.98e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.15e-21,115;CL:0000738,6.90e-19,136;CL:0000988,8.55e-18,177;CL:0002031,5.19e-17,120;CL:0000037,1.50e-13,168;CL:0000542,4.00e-13,53;CL:0000051,4.00e-13,53;CL:0000838,1.83e-12,52;CL:0002032,3.17e-12,161;CL:0000837,3.17e-12,161;CL:0002393,1.49e-10,9;CL:0002397,1.49e-10,9;CL:0000860,1.92e-10,42;CL:0002057,1.92e-10,42;CL:0000148,6.88e-10,10;CL:0000541,6.88e-10,10;CL:0000473,3.20e-09,48;CL:0000234,3.20e-09,48;CL:0000084,1.40e-08,25;CL:0000827,1.40e-08,25;CL:0002194,1.60e-07,59;CL:0000576,1.60e-07,59;CL:0000040,1.60e-07,59;CL:0000559,1.60e-07,59;CL:0002009,4.48e-07,61;CL:0000669,4.55e-07,4;CL:0000766,5.92e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000051;2.41e-07;53!CL:0002057;2.78e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.20e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.27e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.15e-09!102;UBERON:0003061!1.15e-09!102;UBERON:0002193!1.48e-09!112;UBERON:0002405!1.01e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.25e-08;15!UBERON:0000179;1.25e-08;15!UBERON:0000463;1.25e-08;15!UBERON:0004177;3.11e-07;5!UBERON:0005057;3.11e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.95e-13,98;UBERON:0003061,2.95e-13,98;UBERON:0002193,1.61e-12,108;UBERON:0000178,8.38e-09,15;UBERON:0000179,8.38e-09,15;UBERON:0000463,8.38e-09,15;UBERON:0002405,2.00e-07,93;UBERON:0004177,2.05e-07,7;UBERON:0005057,2.05e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0.495065411840187,0.662794751455832,0,0,0,0,1.10808952269109,0.612002073732759,0,1.43117993565528,0.547497700291537,0.627713197974014,8.09982100928283,7.7174554082949,8.50076438187736,3.14691421479123,0.383829398097213,2.01260960310899,0,0.30120591877825,0,0.852139206383318,15.6386155736164,0,0.553995408531877,1.80490002723128,2.82114131930607,0.895661896959697,1.29557466407592,0.77272670290256,1.16318591023652,1.51150377475524,1.4555043671269,0.232429036905685,1.23350366406548,0.619412741790207,0.28769239232215,1.2808035326455,0.945928919554341,0,1.93645405075148,0,0.376484679085209,1.36453075028923,0.898893937780338,1.22433556948361,0.962787081228281,1.27867425159808,0.659702600373432,1.19678194572979,1.70489900213078,0.290209238628584,1.13477044938228,0.622822248995575,0,0.521482918420201,0.434377689410233,0,0,0,6.5489138756702,6.80333759888139,6.9187353017764,1.68492946719743,1.95229960693958,1.44653028027372,4.84521664360123,10.94041724595,7.85455861187926,0,0.546138611262131,0.889509253863555,0.853460445133014,1.20118796110804,1.72425731986345,0.661044872784862,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0,1.05353633910031,0.983548850569165,0,1.23360899399706,4.34684888015763,1.62961133316795,1.4203434172042,0,5.79334375802903,1.17842362989935,1.55073726208535,2.16643091012012,5.63601806792971,4.03183977435623,0.328875809207352,1.93445012450094,2.60822777161547,2.22429844743091,1.60524496853828,4.18142095219907,2.94604291013672,0.766440987203842,0.34362744548263,1.51811815211702,1.27426165729639,1.30216690771284,0.950452044448374,0.451725357233318,2.30375900077953,3.74792179657038,0.947109008176067,2.46338399076314,1.00803371612366,0.267440195783507,1.15859523106239,0,0,0.383587685530591,1.44575660953827,0,0,0,0,0.189069634328136,0,0.43917392846563,0.589405839739707,0.728590576585084,0.370784442784429,0,0,0,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,1.06748995729705,0.24666754841716,0.622422070799533,0.269421344139376,0.490385709340376,3.93529311876822,1.15235184896,0,0.936480230490962,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0.910161361938026,0,0,0.625592599359821,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0,0,0.412210116953756,0,0,0,0,0.252433774244115,0,0.323292113637624,0,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0.265059536642971,1.16193942869518,0.621966330092223,3.02785021050754,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,4.20725321410337,0.4115740113314,0,0,2.94848165003288,0,0.441463099414651,0.737930631258681,0.343135620597051,0.109750285408626,0,0.100528972411631,0.555530670951178,0.325808305310325,1.03993478527958,0,0.34779121492523,0.234817388471643,0.144366447761074,0,0.380508304469197,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0.290633938513962,0.383382679165211,0,0.088048434013226,1.03664057770386,0.432359860250884,0.37872730027914,2.09543051164158,3.81988425558278,1.17217447210047,3.4214489204541,2.46785982487976,3.00343057843917,2.85826432630578,1.68196626518041,2.61576041299968,0.36669142910475,0,0,0,0,0,0,0,0.799266537048298,0.428933980974443,1.62786481617433,0.823240336780769,0,0.355391948742546,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,21.6324327907508,0,0.215627574859517,0.128343036279748,7.11464947822898,3.90419561572865,0,0.502548796003046,1.27587750330633,0,0,0,0.49076596687656,0,0.542530047399471,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0.368738337083406,0.347534457872331,46.4048743186695,13.7257369524342,1.6541442089831,1.07857100409308,1.70764092485511,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.232420756919918,1.20859449591622,0.200506470303285,0,0.574072240823034,0.546273504020151,0.262248829918848,0.902399225814824,0.539107359730903,4.70609861506113,0,0.105551628892876,1.13733384070897,0,0.431831832204279,0,2.16757150035082,6.52196706011309,0.509752546090077,0.831076008928724,1.56712328305525,0,0,0.512900250232778,0.328014645699706,0,0,0,0,0,0,0,0.96670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0.107420244868274,0.145016693914229,0.340906509664404,1.24644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.632758849437452,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0,0,0,0.844430541190656,0.329294892959902,0.75894634753143,2.44954304171488,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0,1.52234282769651,2.29391162142713,0.569647187174163,0,1.23408681925858,2.59389324477087,0,1.5862503525885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| |||
|short_description=p18@SEPT9 | |||
}} |
Revision as of 17:35, 20 January 2014
Short description: | p18@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SEPT9_5end |
Coexpression cluster: | C3687_Pericytes_Burkitt_NK_hereditary_hepatocellular_B_hairy |
Association with transcript: | 59bp_to_ENST00000431235, NM_001113496, uc002jty.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 2.15e-21 | 115 |
leukocyte | 6.90e-19 | 136 |
hematopoietic cell | 8.55e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 5.19e-17 | 120 |
hematopoietic stem cell | 1.50e-13 | 168 |
lymphocyte | 4.00e-13 | 53 |
common lymphoid progenitor | 4.00e-13 | 53 |
lymphoid lineage restricted progenitor cell | 1.83e-12 | 52 |
hematopoietic oligopotent progenitor cell | 3.17e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.17e-12 | 161 |
intermediate monocyte | 1.49e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.49e-10 | 9 |
classical monocyte | 1.92e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-10 | 42 |
melanocyte | 6.88e-10 | 10 |
melanoblast | 6.88e-10 | 10 |
defensive cell | 3.20e-09 | 48 |
phagocyte | 3.20e-09 | 48 |
T cell | 1.40e-08 | 25 |
pro-T cell | 1.40e-08 | 25 |
monopoietic cell | 1.60e-07 | 59 |
monocyte | 1.60e-07 | 59 |
monoblast | 1.60e-07 | 59 |
promonocyte | 1.60e-07 | 59 |
macrophage dendritic cell progenitor | 4.48e-07 | 61 |
pericyte cell | 4.55e-07 | 4 |
myeloid leukocyte | 5.92e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.95e-13 | 98 |
blood island | 2.95e-13 | 98 |
hemolymphoid system | 1.61e-12 | 108 |
blood | 8.38e-09 | 15 |
haemolymphatic fluid | 8.38e-09 | 15 |
organism substance | 8.38e-09 | 15 |
immune system | 2.00e-07 | 93 |
hemopoietic organ | 2.05e-07 | 7 |
immune organ | 2.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.27e-07 | 10 |