FFCP PHASE1:Hg19::chr19:1067256..1067270,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23526 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17102 | |||
|TSSclassifier=strong | |||
|UniProt=F5H4N1 | |||
|association_with_transcript=-23bp_to_ENST00000544746_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_4_at_HMHA1_5end | |||
|id=chr19:1067256..1067270,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.21e-74!172;CL:0000566!1.21e-74!172;CL:0002032!5.33e-71!165;CL:0000837!5.33e-71!165;CL:0000988!4.81e-70!182;CL:0000738!4.78e-68!140;CL:0002087!3.62e-57!119;CL:0002031!1.80e-54!124;CL:0000763!1.78e-37!112;CL:0000049!1.78e-37!112;CL:0000542!4.37e-30!53;CL:0000051!4.37e-30!53;CL:0000766!6.00e-30!76;CL:0000838!9.05e-30!52;CL:0000557!6.64e-26!71;CL:0002009!2.86e-24!65;CL:0002194!1.01e-23!63;CL:0000576!1.01e-23!63;CL:0000040!1.01e-23!63;CL:0000559!1.01e-23!63;CL:0000839!3.15e-23!70;CL:0002057!1.04e-19!42;CL:0000860!1.20e-19!45;CL:0000084!7.72e-17!25;CL:0000827!7.72e-17!25;CL:0000791!6.51e-14!18;CL:0000789!6.51e-14!18;CL:0002420!6.51e-14!18;CL:0002419!6.51e-14!18;CL:0000790!6.51e-14!18;CL:0000945!3.78e-12!24;CL:0000826!3.78e-12!24;CL:0000134!3.34e-09!358;CL:0000625!5.77e-09!11;CL:0000236!7.18e-09!14;CL:0002320!3.89e-08!365;CL:0000094!9.21e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000542;8.48e-24;53!CL:0000084;5.69e-23;25!CL:0002087;2.25e-21;104!CL:0000576;2.78e-20;48!CL:0000791;4.27e-20;18!CL:0000789;4.27e-20;18!CL:0002419;4.27e-20;18!CL:0000738;5.68e-20;136!CL:0000766;7.72e-19;69!CL:0000473;1.50e-18;39!CL:0000234;1.50e-18;39!CL:0000860;1.66e-18;33!CL:0002057;1.66e-18;33!CL:0000945;3.43e-16;24!CL:0000988;2.47e-15;177!CL:0000763;2.24e-14;100!CL:0000625;1.04e-12;11!CL:0000236;6.14e-12;13!CL:0000094;2.23e-09;8!CL:0000219;1.53e-08;193!CL:0000624;4.12e-08;6!CL:0000081;1.31e-07;11!CL:0002393;5.65e-07;6!CL:0002397;5.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.66e-98,168;CL:0002032,2.28e-96,161;CL:0000837,2.28e-96,161;CL:0000738,6.04e-96,136;CL:0000988,3.23e-94,177;CL:0002087,4.17e-83,115;CL:0002031,7.20e-79,120;CL:0000763,1.08e-49,108;CL:0000049,1.08e-49,108;CL:0000766,3.19e-45,72;CL:0000542,1.73e-41,53;CL:0000051,1.73e-41,53;CL:0000838,5.27e-41,52;CL:0000557,7.83e-38,67;CL:0000839,1.48e-35,66;CL:0002194,1.91e-35,59;CL:0000576,1.91e-35,59;CL:0000040,1.91e-35,59;CL:0000559,1.91e-35,59;CL:0002009,4.67e-35,61;CL:0000473,3.42e-31,48;CL:0000234,3.42e-31,48;CL:0000860,1.86e-27,42;CL:0002057,1.86e-27,42;CL:0000134,6.95e-25,354;CL:0002320,1.40e-23,361;CL:0000084,5.90e-23,25;CL:0000827,5.90e-23,25;CL:0000791,4.63e-20,18;CL:0000789,4.63e-20,18;CL:0002420,4.63e-20,18;CL:0002419,4.63e-20,18;CL:0000790,4.63e-20,18;CL:0000219,1.44e-19,386;CL:0000945,4.01e-16,24;CL:0000826,4.01e-16,24;CL:0000048,1.06e-13,427;CL:0000034,2.28e-13,441;CL:0000723,5.53e-13,433;CL:0000625,1.19e-12,11;CL:0000236,1.66e-12,14;CL:0000094,2.32e-09,8;CL:0002393,6.73e-09,9;CL:0002397,6.73e-09,9;CL:0000624,3.98e-08,6;CL:0000081,1.24e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;8.48e-24;53!CL:0000790;4.27e-20;18!CL:0002057;9.45e-20;42!CL:0000049;1.05e-13;108 | |||
|ontology_enrichment_disease=DOID:2531!4.91e-14!51;DOID:0060083!4.91e-14!51;DOID:1240!3.58e-11!39;DOID:8692!4.49e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.75e-09;51!DOID:0060083;2.75e-09;51!DOID:1240;2.01e-08;39!DOID:0060058;3.05e-08;10!DOID:8692;4.63e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.19e-15,51;DOID:0060083,4.19e-15,51;DOID:1240,1.79e-10,39;DOID:0060058,3.43e-08,10;DOID:8692,3.90e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.28e-34!102;UBERON:0003061!3.28e-34!102;UBERON:0002193!4.62e-33!112;UBERON:0002371!1.84e-21!80;UBERON:0001474!9.27e-20!86;UBERON:0002405!2.10e-18!115;UBERON:0004765!1.32e-13!101;UBERON:0001434!1.32e-13!101;UBERON:0000178!8.22e-11!15;UBERON:0000179!8.22e-11!15;UBERON:0000463!8.22e-11!15;UBERON:0003081!1.40e-07!216;UBERON:0002384!1.64e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.03e-14;15!UBERON:0000179;7.03e-14;15!UBERON:0000463;7.03e-14;15!UBERON:0002390;8.07e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.60e-50,98;UBERON:0003061,1.60e-50,98;UBERON:0002193,3.71e-46,108;UBERON:0002405,7.94e-34,93;UBERON:0002371,2.59e-32,76;UBERON:0001474,1.81e-28,82;UBERON:0004765,3.51e-24,90;UBERON:0002384,2.29e-22,371;UBERON:0001434,7.51e-20,100;UBERON:0003081,6.77e-15,203;UBERON:0000178,7.38e-14,15;UBERON:0000179,7.38e-14,15;UBERON:0000463,7.38e-14,15;UBERON:0004177,8.18e-07,7;UBERON:0005057,8.18e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,4.18680700783456,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,2.21671591514854,2.51874500203774,5.50709987588466,2.30297638858328,5.26374819274658,0,0,0,4.26069603191659,3.55423081218554,0.293600439334847,7.20194031091441,7.82123345133553,8.24641308720237,2.91090116511902,4.21061765824673,3.8636335145128,3.05336301437086,2.26725566213286,3.63876091781724,2.09186133215116,2.46700732813095,3.09706370895104,2.3015391385772,1.7931249457037,1.41889337933151,2.75796544589295,1.29096936716765,4.06279459783025,4.1413314699373,2.45615535052061,0.898893937780338,4.28517449319264,1.28371610830437,3.19668562899521,3.62836430205388,4.9865914405408,2.55734850319616,2.61188314765726,1.70215567407342,2.4912889959823,3.51748131359441,4.69334626578181,2.38907729175628,2.42159801053347,1.10483290796269,2.84816148696796,5.28138215779854,5.74031609905618,4.40283155567589,4.6054738770063,5.10601435661121,4.98249318760948,2.85012743741249,3.38158351238453,3.10529061399878,3.51992488922645,7.09980194640771,5.33705552318133,8.53460445133014,5.20514783146816,3.4485146397269,4.62731410949403,7.63243003628291,6.83055562931338,7.04684627245127,4.58727873750275,2.64342657158052,1.68152568894461,2.63384084775077,9.63877873557782,11.7903228824749,12.9528944369691,15.7155305667237,14.0146574652444,9.9424039204294,17.534405556712,11.6980979729432,12.9626599288928,9.74749136167933,13.8109970520158,12.6810406528418,14.4365875791465,15.4571630327456,17.9627511560801,10.7227141721969,15.5700891320163,13.3770414044857,15.6803285707465,13.9370491518006,9.58051234004803,13.7450978193052,7.59059076058509,12.1054857443157,8.46408490013344,4.75226022224187,11.1425588117552,13.9505406158316,7.49584359314075,12.5491943583329,4.10563998460523,8.0642697289893,12.0348088102578,13.7583183688659,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0.364295288292542,0,2.27183175558278,2.26368658489047,1.86141144726411,1.90792499444274,0.571994910780128,0.371457501329565,0,0,0.694281003215189,0,0,0.275118041940067,0.626984899610432,0.516833518338658,0,0,0.402829317109147,1.52054421143703,0.976248230192678,0.367663080345869,1.62028389576352,0,0,0.450445921933289,0,0,0,13.1780417436063,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0,0.828147600278907,0,1.20505514941741,0.55146986366197,0.217879444092406,0.474541238222193,0,0.588664395376038,0.769494313892781,1.4763109092493,0,0,0,1.26755034821831,0,0,10.5951143859516,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.925971025153221,0.380508304469197,0,0,1.96973604869918,1.40402559083543,1.93220510975347,0,0,0,0,0,0,0,2.64145302039678,4.35389042635621,2.16179930125442,3.40854570251226,0.507983154337352,0,0,1.71072446022705,0.205654985406647,0.901029173531752,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,4.86495122564762,3.01354254859276,4.21667878966063,0,0,0,0,0,0,6.50093835162458,8.27529192848094,8.40947541952118,9.24069861214188,0,0,0,0.167516265334349,0,8.98808428736619,20.9413021442817,9.94597232246485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23688091430106,8.62856803274467,7.68438416184799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0,0.863663664408557,0,0,0,0.509752546090077,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,1.03041011647722,0.27470839445503,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0.229723400206959,10.1489521846434,15.2927441428475,11.3929437434833,10.9586616710583,18.0999400157925,14.2664128462398,12.9607544937148,9.51750211553125,0,0,0.735120647943095,1.85803175125719,1.73123055571734,1.35169502361987,6.21762463642407,1.39705560002972,4.5961288831768,2.32840940996271,0.973865820823666,3.08876895924805,6.39057101292938,3.60363760277953,0,3.04725200042886,4.17528995269619,3.22879531505676,2.55507742614196,4.12206413706918,3.07240764308458,2.46043718681657,2.0021897005429,3.71237381263877,0.278406173895242,0,0,2.99764771198038,1.4098700508785,0,1.61158997199083,0,7.57815013086853,0.284136146806413,0.23874448473769,0,0,0,0,0,2.96646973608167,0,0.597743964753209,4.69682656402951,0,0,0.861593638227486,0,0.718946809178615,0,7.1620131831762,0.295930216910801,7.18449277040819,0,0,0.278304294485554,0,0,0,0.724999575434793,0.910347586283997,0.508507300585533,0,0,0,0.173624994933292,0,0.241192877250816,1.52581736317083,0,0,0,0,0,0.153900517007594,0,0.23056390438806,0.0897576444097721,0,0.957003479195758,0.183195186803725,1.06606955203727,3.06579894587209,2.98262487150547,1.16348177330109,0.225595660617181,0.19606253431774,0.335643173951685,0.569261198172555,0.953619473882272,0,0,0,0,0,0.530745387020035,2.4441205797345,2.6686901581256,0.988511511572023,2.19286093961456,0.067401132980677,0.802577647298789,0.234264445725339,3.46664099509765,0,0.242780379534093,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0.554698692052555,0,0.0979923974143777,0.261177619741208,0.52418000472609,0,0.19351266257817,0.65780385377567,0.328461828212837,0.581934098930517,0,0,0.137041924646751,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0.640358984218058,0.799238438328521,0,0,0,0.14405479798815,0.372757606696298,0,0,0,0,0,0.600420288709789,0.273810757783986,6.38732940334862,0,0.788662062837943,0,0.229160424011684,0.717873024576814,0,0,0.446342914883745,0.0671834724867263,0,0,0.315132729228895,0.0824158583811665,0.13480708770837,0,1.01607998478941,1.59045937961861,0.544813624446302,0,0.137539436597234,0,1.799791132412,0.77380195455795,0.121499113316049,0,0.157611414598396,0.262272940674991,0.211200673038813,0,0.767660789277781,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0.79318464064088,0,0,0.258565912723101,0.13223260174269,0,0,1.17466153824464,0.157204305099666,0.828478110694391,4.96166021811951,3.35939774226505,1.09613338542806,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.372578417648301,0,0.249960815924213,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0.521988583930423,0.680117776536817,0.231522474323834,0.734210113519403,0,0,0.438568099157414,0.176689145945881,1.54331230616732,0.168942440653073,0,0,0,0.276516872303462,3.3126252502696,6.1117826544147,2.61704630809351,0,0,1.05656061679314,6.39959666735776,2.45390978296524,3.09986963389468,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,1.02520268501629,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0.366857197043358,1.27078232765372,0,0,0.198916222116275,0.150420656698515,0,1.56302802246618,0.261906694481422,0.327543835020193,0.443568258651136,0,0.781078098613847,0.206686796501184,0,0,0,0.496211178389294,0.175871244359621,0.511049710558381,0,0.336283722218824,0,0,0.266107110487916,1.95897778844825,0.171488009437418,0.135939465953663,0.0657727735628491,0.354581522651905,0.111231401892069,0.470958557103084,0,0.560544326627578,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0.354996002191696,0.511280428554946,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.301925687133347,0.694567422971502,0.218559560503957,0.470317296361523,0.245148321753905,0.235676547101626,0.588925401344836,0.594092800654172,0.4226557275834,0,2.91350145737546,3.15843651070528,1.29923502702408,0,0,0.561689566824178,0,0.458729283404541,0.430018749454354,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0.426467963801962,0.23806443146374,5.10252387704448,5.58672428662721,0.112131862580613,0.12729431655633,0.202117188958219,0.217716747896961,0,3.36760265072938,1.07583308089015,0,0.569822880276821,0.533636729388577,0,0.269475606319761,0,0.244482888365733,0.406896178315738,0.665756774185513,4.83057104618463,1.28227396921293 | |||
|short_description=p4@HMHA1 | |||
}} |
Revision as of 20:11, 20 January 2014
Short description: | p4@HMHA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HMHA1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -23bp_to_ENST00000544746_5end |
EntrezGene: | HMHA1 |
HGNC: | 17102 |
UniProt: | F5H4N1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.60e-50 | 98 |
blood island | 1.60e-50 | 98 |
hemolymphoid system | 3.71e-46 | 108 |
immune system | 7.94e-34 | 93 |
bone marrow | 2.59e-32 | 76 |
bone element | 1.81e-28 | 82 |
skeletal element | 3.51e-24 | 90 |
connective tissue | 2.29e-22 | 371 |
skeletal system | 7.51e-20 | 100 |
lateral plate mesoderm | 6.77e-15 | 203 |
blood | 7.38e-14 | 15 |
haemolymphatic fluid | 7.38e-14 | 15 |
organism substance | 7.38e-14 | 15 |
hemopoietic organ | 8.18e-07 | 7 |
immune organ | 8.18e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.19e-15 | 51 |
immune system cancer | 4.19e-15 | 51 |
leukemia | 1.79e-10 | 39 |
lymphoma | 3.43e-08 | 10 |
myeloid leukemia | 3.90e-07 | 31 |