FFCP PHASE1:Hg19::chr19:2477163..2477216,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4616 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4096 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=303bp_to_AK129595_5end | |||
|coexpression_cluster_id=C168 | |||
|description=CAGE_peak_2_at_GADD45B_5end | |||
|id=chr19:2477163..2477216,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.62e-20!42;CL:0000860!3.58e-18!45;CL:0000557!1.82e-15!71;CL:0002009!2.16e-15!65;CL:0000766!2.43e-15!76;CL:0002194!7.33e-15!63;CL:0000576!7.33e-15!63;CL:0000040!7.33e-15!63;CL:0000559!7.33e-15!63;CL:0000839!2.23e-14!70;CL:0000738!3.99e-10!140;CL:0002031!1.98e-09!124;CL:0002087!4.50e-09!119;CL:0000134!7.80e-09!358;CL:0002320!8.57e-09!365;CL:0000136!6.79e-08!15;CL:0000763!2.26e-07!112;CL:0000049!2.26e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.31e-28;33!CL:0002057;2.31e-28;33!CL:0000473;8.88e-24;39!CL:0000234;8.88e-24;39!CL:0000766;9.18e-16;69!CL:0000576;2.03e-15;48!CL:0000136;1.54e-07;13!CL:0000763;5.53e-07;100!CL:0002087;6.67e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.79e-29,48;CL:0000234,1.79e-29,48;CL:0000860,3.32e-29,42;CL:0002057,3.32e-29,42;CL:0000557,1.12e-27,67;CL:0000766,5.06e-27,72;CL:0000839,2.70e-26,66;CL:0002009,1.63e-24,61;CL:0002194,1.09e-23,59;CL:0000576,1.09e-23,59;CL:0000040,1.09e-23,59;CL:0000559,1.09e-23,59;CL:0000738,2.72e-21,136;CL:0002031,2.93e-20,120;CL:0002087,1.37e-18,115;CL:0000763,4.21e-16,108;CL:0000049,4.21e-16,108;CL:0000037,5.45e-15,168;CL:0000134,1.16e-14,354;CL:0002032,3.19e-14,161;CL:0000837,3.19e-14,161;CL:0002320,4.78e-14,361;CL:0000988,1.21e-13,177;CL:0000219,6.88e-12,386;CL:0000048,8.23e-10,427;CL:0000034,1.51e-09,441;CL:0000723,1.92e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.60e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.11e-12!80;UBERON:0001474!4.56e-12!86;UBERON:0002405!7.38e-12!115;UBERON:0002390!5.30e-10!102;UBERON:0003061!5.30e-10!102;UBERON:0002193!7.77e-10!112;UBERON:0002384!1.18e-08!375;UBERON:0004765!3.07e-08!101;UBERON:0001434!3.07e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.52e-23,76;UBERON:0001474,5.85e-21,82;UBERON:0002390,4.99e-20,98;UBERON:0003061,4.99e-20,98;UBERON:0002405,1.20e-18,93;UBERON:0002193,2.04e-18,108;UBERON:0004765,2.65e-18,90;UBERON:0001434,1.36e-15,100;UBERON:0002384,6.22e-14,371;UBERON:0003081,1.96e-11,203 | |||
|phase1_expression=0.908391896352783,1.92690471501885,0.422863212287913,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0,0.408001382488506,0,0,0,0.376627918784408,0.687720651731561,0.656804715599566,0.314843125254717,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.232401601740905,0,0,0.553995408531877,4.01088894940283,1.51907609501096,0.447830948479849,0.32389366601898,0.515151135268373,0.290796477559129,0.377875943688809,0.727752183563449,2.55671940596253,3.70051099219643,1.23882548358041,6.90461741573161,3.07392847834921,5.20260905754887,9.65287906062532,7.10033151942209,8.12558919566051,1.50593871634084,1.09162460023138,1.12361742222542,7.65209730927256,2.56743221660875,8.95071976118658,0.989553900560148,2.59302754908121,3.83602275479425,2.32167390902867,0,0.622822248995575,3.76872997885115,5.73631210262222,3.69221035998698,1.21079900526674,0.736555271975129,0.949387162322653,0.633765858935825,0.637812899895131,0.419317291016752,0.561643155732475,0.450530678524519,0.32145117339416,1.42506371870624,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,1.1384259382189,0,1.14681968437569,0,2.24203425192614,0,0.196709770113833,2.35806457649499,1.43921049299656,0.167186495390678,0.977766799900771,0,0,0.445641827540694,0,0.886135578334485,0,0,0,0.328875809207352,0,0,0.14828656316206,0.802622484269139,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,1.20964045934839,3.4767225451856,0.868946423296794,0,0,0.12786256184353,0.361439152384566,0,0,0.795285947051099,1.94653948121054,0,0,0.351339142772504,0.327447688744282,0,0.370784442784429,0,0,0.132957960518865,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,1.00416183829401,0,0,0,0,1.62028389576352,0.17859945656816,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0.132409180813219,0,0,0,0,1.2333377420858,0,0.538842688278752,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0.939475989150119,0.161872944368132,0,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0,0.515281080091258,0,0,0.68205903612839,0.252433774244115,0.276149695926898,0,0.355009592516614,0.403008392910561,0.339121184620975,0,0,0.286804595389004,0.365921118388786,0,0,0.10366105501537,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0.8231480226628,1.47008711385542,1.26755034821831,1.96565443335525,2.36315962672562,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0.925971025153221,0.570762456703795,0,0,0.246217006087397,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,15.1349524344764,8.07071739134984,15.9065466117239,0.063497894292169,0.763976851116555,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0.845302752556,0.531876233169741,0,0,0,0,0.714889968290738,0.542621605391443,0.823240336780769,0.977208552881205,0.355391948742546,0,0,0,0,3.64871341923571,0.502257091432126,4.21667878966063,0,0,0,0.723906533337896,0.410952645100767,0.179060963239896,0,0.591092280605782,3.01878604803324,0.898401253958239,0.254094624222463,0,0,0,0,1.49801404789436,2.99161459204025,0,0.12269149171914,0.500170521059677,0,0.623912584592421,0.535286966391485,0,0,0,0,3.10419213877515,0,0,0.173767228936166,0,0.686286847621712,0,2.80428461064202,1.17400313583789,1.5156378572313,0,1.5119514666484,1.24053903909388,0.306923946576125,2.52594084989766,1.02511319404561,0.511707249066704,0.804269605718038,1.48418066444991,0.308419387605311,0.532685175939381,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.184161977871793,0.114814448164607,0.546273504020151,0,0,0,0,0,0,0,0,0.215915916102139,4.62681758070868,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0.0915694648183434,0,0,1.95018073810956,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.178064071293475,0.661139661443912,0.192190067365106,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0.438450885253763,0,0.655894752046633,0.405820753925408,0,0.563391205064483,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.659006605437454,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.50787533340481,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,1.43246690842614,0.296964680832639,0.614321404198464,0,0.703347082052564,0.333926115068718,0,0,2.39097585901284,0.828851746593443,0,0.409074730008619,0.246169610922139,0.933118762985422,0.359473404589307,0,0.511572370226872,0.887790650732402,2.3948309234694,0,0.96933274609521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| |||
|short_description=p2@GADD45B | |||
}} |
Revision as of 20:25, 20 January 2014
Short description: | p2@GADD45B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GADD45B_5end |
Coexpression cluster: | C168_Mast_CD14_immature_Basophils_Eosinophils_CD34_Peripheral |
Association with transcript: | 303bp_to_AK129595_5end |
EntrezGene: | GADD45B |
HGNC: | 4096 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.79e-29 | 48 |
phagocyte | 1.79e-29 | 48 |
classical monocyte | 3.32e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.32e-29 | 42 |
granulocyte monocyte progenitor cell | 1.12e-27 | 67 |
myeloid leukocyte | 5.06e-27 | 72 |
myeloid lineage restricted progenitor cell | 2.70e-26 | 66 |
macrophage dendritic cell progenitor | 1.63e-24 | 61 |
monopoietic cell | 1.09e-23 | 59 |
monocyte | 1.09e-23 | 59 |
monoblast | 1.09e-23 | 59 |
promonocyte | 1.09e-23 | 59 |
leukocyte | 2.72e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 2.93e-20 | 120 |
nongranular leukocyte | 1.37e-18 | 115 |
myeloid cell | 4.21e-16 | 108 |
common myeloid progenitor | 4.21e-16 | 108 |
hematopoietic stem cell | 5.45e-15 | 168 |
mesenchymal cell | 1.16e-14 | 354 |
hematopoietic oligopotent progenitor cell | 3.19e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.19e-14 | 161 |
connective tissue cell | 4.78e-14 | 361 |
hematopoietic cell | 1.21e-13 | 177 |
motile cell | 6.88e-12 | 386 |
multi fate stem cell | 8.23e-10 | 427 |
stem cell | 1.51e-09 | 441 |
somatic stem cell | 1.92e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.52e-23 | 76 |
bone element | 5.85e-21 | 82 |
hematopoietic system | 4.99e-20 | 98 |
blood island | 4.99e-20 | 98 |
immune system | 1.20e-18 | 93 |
hemolymphoid system | 2.04e-18 | 108 |
skeletal element | 2.65e-18 | 90 |
skeletal system | 1.36e-15 | 100 |
connective tissue | 6.22e-14 | 371 |
lateral plate mesoderm | 1.96e-11 | 203 |