FFCP PHASE1:Hg19::chr19:37825634..37825641,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284459 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4928 | |||
|TSSclassifier=strong | |||
|UniProt=P10072 | |||
|association_with_transcript=54bp_to_ENST00000324411,NM_181786,uc002ofz.2,uc002oga.2,uc002ogb.2,uc002ogc.2,uc010xto.1,uc010xtp.1_5end | |||
|description=CAGE_peak_9_at_HKR1_5end | |||
|id=chr19:37825634..37825641,+ | |||
|ontology_enrichment_celltype=CL:0000624!2.08e-11!6;CL:0002322!4.37e-09!5;CL:0000791!8.63e-07!18;CL:0000789!8.63e-07!18;CL:0002420!8.63e-07!18;CL:0002419!8.63e-07!18;CL:0000790!8.63e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000898;7.72e-46;3!CL:0000624;1.56e-40;6!CL:0000815;3.46e-31;2!CL:0000792;3.46e-31;2!CL:0002677;3.46e-31;2!CL:0000791;4.63e-21;18!CL:0000789;4.63e-21;18!CL:0002419;4.63e-21;18!CL:0000895;1.65e-16;1!CL:0000084;3.41e-15;25!CL:0000039;7.15e-10;7!CL:0000586;7.15e-10;7!CL:0002097;3.57e-09;2!CL:0000542;1.88e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,4.87e-46,3;CL:0000624,7.63e-41,6;CL:0000815,1.87e-31,2;CL:0000792,1.87e-31,2;CL:0002677,1.87e-31,2;CL:0000791,3.17e-21,18;CL:0000789,3.17e-21,18;CL:0002420,3.17e-21,18;CL:0002419,3.17e-21,18;CL:0000790,3.17e-21,18;CL:0000810,1.93e-16,1;CL:0000895,1.93e-16,1;CL:0002436,1.93e-16,1;CL:0002427,1.93e-16,1;CL:0002428,1.93e-16,1;CL:0002429,1.93e-16,1;CL:0002433,1.93e-16,1;CL:0002431,1.93e-16,1;CL:0002432,1.93e-16,1;CL:0000084,2.60e-15,25;CL:0000827,2.60e-15,25;CL:0000838,2.41e-10,52;CL:0000542,3.81e-10,53;CL:0000051,3.81e-10,53;CL:0000039,7.31e-10,7;CL:0000586,7.31e-10,7;CL:0002097,3.43e-09,2;CL:0000893,6.94e-09,2;CL:0002489,6.94e-09,2;CL:0000809,6.94e-09,2;CL:0000808,6.94e-09,2;CL:0000894,6.94e-09,2;CL:0000806,6.94e-09,2;CL:0000807,6.94e-09,2;CL:0000805,6.94e-09,2;CL:0002425,6.94e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.63e-21;18!CL:0002427;1.65e-16;1!CL:0002425;6.42e-09;2!CL:0000051;1.88e-07;53!UBERON:0009117;3.60e-07;10!UBERON:0005564;3.60e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!3.13e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.37e-31;2!UBERON:0002757;1.37e-31;2!UBERON:0010134;1.37e-31;2!UBERON:0005408;1.37e-31;2!UBERON:0001899;1.37e-31;2!UBERON:0003296;2.44e-16;4!UBERON:0010133;2.44e-16;4!UBERON:0002784;2.44e-16;4!UBERON:0001894;9.52e-10;7!UBERON:0000473;9.48e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.54e-31,2;UBERON:0002757,2.54e-31,2;UBERON:0010134,2.54e-31,2;UBERON:0005408,2.54e-31,2;UBERON:0001899,2.54e-31,2;UBERON:0003296,3.32e-16,4;UBERON:0010133,3.32e-16,4;UBERON:0002784,3.32e-16,4;UBERON:0001894,1.13e-09,7;UBERON:0006222,1.13e-09,7;UBERON:0000473,9.67e-09,8;UBERON:0002368,2.72e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0.393010762749165,1.85041349099558,0.167186495390678,1.30368906653436,0.473447805734733,0,0,1.17842362989935,0.443067789167242,0,0.384273959177026,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,1.14966148080576,1.03088233644789,0.759059076058509,0,0,0,0,0,0,0,0,1.20964045934839,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.530119073285941,0.348581828608555,0.414644220061482,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0.985153801009636,0.431255149719035,1.15508732651774,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0.606255142892519,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.307160702099232,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.437299999980979,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,1.05226393590145,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0.124252535565433,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.687697182986169,0,0.674921674654501,0,0.0607495566580247,0,0.157611414598396,0.157363764404994,0.105600336519406,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,4.28883182749851,0,0,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,3.21421101526972,1.00885116665647,0,0,0,0,0,0.135939465953663,0,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.714765441766563,0.632054446930906,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0.31020638566432,0,0.223710863595585,0,0.365753774946808,0,0,0,0,0.233939463462106,0.397901550322736,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.760191006068622,2.14176542458162,4.00826107898341,0,0.250707539292375,0.151557396436479,0.267964130156178,0,0,0,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p9@HKR1 | |||
}} |
Revision as of 23:02, 20 January 2014
Short description: | p9@HKR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HKR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 54bp_to_ENST00000324411, NM_181786, uc002ofz.2, uc002oga.2, uc002ogb.2, uc002ogc.2, uc010xto.1, uc010xtp.1_5end |
EntrezGene: | HKR1 |
HGNC: | 4928 |
UniProt: | P10072 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.54e-31 | 2 |
regional part of epithalamus | 2.54e-31 | 2 |
secretory circumventricular organ | 2.54e-31 | 2 |
circumventricular organ | 2.54e-31 | 2 |
epithalamus | 2.54e-31 | 2 |
gland of diencephalon | 3.32e-16 | 4 |
neuroendocrine gland | 3.32e-16 | 4 |
regional part of diencephalon | 3.32e-16 | 4 |
diencephalon | 1.13e-09 | 7 |
future diencephalon | 1.13e-09 | 7 |
testis | 9.67e-09 | 8 |
endocrine gland | 2.72e-07 | 35 |