FFCP PHASE1:Hg19::chr19:42387240..42387310,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=681 | |||
|TSSclassifier=strong | |||
|UniProt=Q92888 | |||
|association_with_transcript=0bp_to_ENST00000316079,ENST00000347545,ENST00000354532,NM_004706,NM_198977,uc002orw.1,uc002orx.2,uc002ory.2,uc002orz.2_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_ARHGEF1_5end | |||
|id=chr19:42387240..42387310,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.54e-49!172;CL:0000566!1.54e-49!172;CL:0000988!1.85e-49!182;CL:0002032!8.57e-46!165;CL:0000837!8.57e-46!165;CL:0000738!9.17e-46!140;CL:0002087!1.01e-38!119;CL:0002031!8.27e-36!124;CL:0000763!6.50e-25!112;CL:0000049!6.50e-25!112;CL:0000766!5.81e-22!76;CL:0002057!1.36e-19!42;CL:0000838!2.60e-19!52;CL:0000542!3.03e-19!53;CL:0000051!3.03e-19!53;CL:0000557!6.91e-19!71;CL:0002009!6.99e-18!65;CL:0002194!2.37e-17!63;CL:0000576!2.37e-17!63;CL:0000040!2.37e-17!63;CL:0000559!2.37e-17!63;CL:0000860!2.20e-16!45;CL:0000839!7.08e-16!70;CL:0000134!1.45e-15!358;CL:0002320!2.56e-15!365;CL:0000084!4.08e-13!25;CL:0000827!4.08e-13!25;CL:0000791!3.65e-12!18;CL:0000789!3.65e-12!18;CL:0002420!3.65e-12!18;CL:0002419!3.65e-12!18;CL:0000790!3.65e-12!18;CL:0000219!1.04e-11!390;CL:0000723!7.05e-11!436;CL:0000048!9.64e-11!430;CL:0000034!4.28e-10!444;CL:0002371!1.71e-08!591;CL:0000625!5.54e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.55e-13;33!CL:0002057;1.55e-13;33!CL:0000576;2.79e-13;48!CL:0000084;4.19e-13;25!CL:0002087;1.40e-12;104!CL:0000791;3.74e-12;18!CL:0000789;3.74e-12;18!CL:0002419;3.74e-12;18!CL:0000473;3.98e-12;39!CL:0000234;3.98e-12;39!CL:0000542;7.44e-12;53!CL:0000766;2.72e-11;69!CL:0000738;2.77e-10;136!CL:0000763;1.26e-09;100!CL:0000988;3.10e-09;177!CL:0000625;5.68e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.58e-53,168;CL:0000988,1.41e-52,177;CL:0000738,1.64e-49,136;CL:0002032,3.73e-49,161;CL:0000837,3.73e-49,161;CL:0002087,1.81e-42,115;CL:0002031,2.87e-39,120;CL:0000763,7.91e-28,108;CL:0000049,7.91e-28,108;CL:0000766,1.92e-25,72;CL:0000557,3.53e-22,67;CL:0002009,2.97e-21,61;CL:0002194,9.98e-21,59;CL:0000576,9.98e-21,59;CL:0000040,9.98e-21,59;CL:0000559,9.98e-21,59;CL:0000473,4.24e-20,48;CL:0000234,4.24e-20,48;CL:0000860,1.36e-19,42;CL:0002057,1.36e-19,42;CL:0000838,2.60e-19,52;CL:0000542,3.03e-19,53;CL:0000051,3.03e-19,53;CL:0000839,7.90e-19,66;CL:0000134,2.52e-16,354;CL:0002320,4.61e-16,361;CL:0000084,4.08e-13,25;CL:0000827,4.08e-13,25;CL:0000219,2.49e-12,386;CL:0000791,3.65e-12,18;CL:0000789,3.65e-12,18;CL:0002420,3.65e-12,18;CL:0002419,3.65e-12,18;CL:0000790,3.65e-12,18;CL:0000723,3.29e-11,433;CL:0000048,4.50e-11,427;CL:0000034,2.07e-10,441;CL:0000625,5.54e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.17e-14;42!CL:0000790;3.74e-12;18!CL:0000051;7.44e-12;53!CL:0000049;1.26e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!5.18e-07!51;DOID:0060083!5.18e-07!51;DOID:1240!8.21e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.18e-07,51;DOID:0060083,5.18e-07,51;DOID:1240,8.21e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.03e-26!102;UBERON:0003061!5.03e-26!102;UBERON:0002193!2.16e-25!112;UBERON:0003081!3.00e-19!216;UBERON:0002371!1.42e-17!80;UBERON:0001474!1.08e-15!86;UBERON:0002384!1.24e-14!375;UBERON:0002405!1.32e-13!115;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0000178!8.09e-08!15;UBERON:0000179!8.09e-08!15;UBERON:0000463!8.09e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.86e-08;15!UBERON:0000179;7.86e-08;15!UBERON:0000463;7.86e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.24e-29,98;UBERON:0003061,3.24e-29,98;UBERON:0002193,2.42e-28,108;UBERON:0002405,9.01e-22,93;UBERON:0003081,1.30e-20,203;UBERON:0002371,1.84e-20,76;UBERON:0001474,3.03e-18,82;UBERON:0002384,2.38e-15,371;UBERON:0004765,3.55e-15,90;UBERON:0001434,1.35e-12,100;UBERON:0000178,8.09e-08,15;UBERON:0000179,8.09e-08,15;UBERON:0000463,8.09e-08,15 | |||
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| |||
|short_description=p1@ARHGEF1 | |||
}} |
Revision as of 23:31, 20 January 2014
Short description: | p1@ARHGEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGEF1_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000316079, ENST00000347545, ENST00000354532, NM_004706, NM_198977, uc002orw.1, uc002orx.2, uc002ory.2, uc002orz.2_5end |
EntrezGene: | ARHGEF1 |
HGNC: | 681 |
UniProt: | Q92888 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.24e-29 | 98 |
blood island | 3.24e-29 | 98 |
hemolymphoid system | 2.42e-28 | 108 |
immune system | 9.01e-22 | 93 |
lateral plate mesoderm | 1.30e-20 | 203 |
bone marrow | 1.84e-20 | 76 |
bone element | 3.03e-18 | 82 |
connective tissue | 2.38e-15 | 371 |
skeletal element | 3.55e-15 | 90 |
skeletal system | 1.35e-12 | 100 |
blood | 8.09e-08 | 15 |
haemolymphatic fluid | 8.09e-08 | 15 |
organism substance | 8.09e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.18e-07 | 51 |
immune system cancer | 5.18e-07 | 51 |
leukemia | 8.21e-07 | 39 |