FFCP PHASE1:Hg19::chr19:47615477..47615491,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23211 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17808 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002pgb.1_5end | |||
|description=CAGE_peak_3_at_ZC3H4_5end | |||
|id=chr19:47615477..47615491,- | |||
|ontology_enrichment_celltype=CL:0000988!7.94e-32!182;CL:0000037!5.57e-30!172;CL:0000566!5.57e-30!172;CL:0002032!2.11e-29!165;CL:0000837!2.11e-29!165;CL:0000738!4.08e-25!140;CL:0002031!3.22e-22!124;CL:0002087!1.64e-21!119;CL:0000763!4.77e-20!112;CL:0000049!4.77e-20!112;CL:0000766!4.10e-17!76;CL:0002057!3.25e-16!42;CL:0000860!1.31e-15!45;CL:0000839!6.76e-15!70;CL:0000557!5.94e-14!71;CL:0002194!2.70e-12!63;CL:0000576!2.70e-12!63;CL:0000040!2.70e-12!63;CL:0000559!2.70e-12!63;CL:0002009!9.38e-12!65;CL:0000219!1.54e-10!390;CL:0000542!8.77e-09!53;CL:0000051!8.77e-09!53;CL:0000134!1.53e-08!358;CL:0000838!2.53e-08!52;CL:0002320!3.50e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.48e-16;33!CL:0002057;2.48e-16;33!CL:0000576;1.12e-12;48!CL:0000473;5.03e-12;39!CL:0000234;5.03e-12;39!CL:0000766;1.87e-10;69!CL:0000763;2.48e-09;100!CL:0002087;8.57e-09;104!CL:0000738;5.01e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.25e-32,177;CL:0000037,5.42e-31,168;CL:0002032,2.16e-30,161;CL:0000837,2.16e-30,161;CL:0000738,3.62e-26,136;CL:0002031,3.11e-23,120;CL:0002087,1.55e-22,115;CL:0000763,4.59e-21,108;CL:0000049,4.59e-21,108;CL:0000766,2.30e-18,72;CL:0000860,3.20e-16,42;CL:0002057,3.20e-16,42;CL:0000839,4.37e-16,66;CL:0000557,4.64e-15,67;CL:0000473,1.30e-14,48;CL:0000234,1.30e-14,48;CL:0002194,2.16e-13,59;CL:0000576,2.16e-13,59;CL:0000040,2.16e-13,59;CL:0000559,2.16e-13,59;CL:0002009,8.85e-13,61;CL:0000219,2.09e-10,386;CL:0000542,8.69e-09,53;CL:0000051,8.69e-09,53;CL:0000134,1.97e-08,354;CL:0000838,2.51e-08,52;CL:0002320,4.50e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.49e-13;42!CL:0000049;1.05e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.08e-21!112;UBERON:0002390!1.28e-20!102;UBERON:0003061!1.28e-20!102;UBERON:0002371!6.41e-13!80;UBERON:0001474!1.75e-12!86;UBERON:0002405!6.72e-12!115;UBERON:0003081!8.50e-12!216;UBERON:0004765!1.14e-08!101;UBERON:0001434!1.14e-08!101;UBERON:0002384!4.11e-08!375;UBERON:0000178!7.45e-08!15;UBERON:0000179!7.45e-08!15;UBERON:0000463!7.45e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.18e-08;15!UBERON:0000179;4.18e-08;15!UBERON:0000463;4.18e-08;15!UBERON:0002390;3.44e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.23e-22,108;UBERON:0002390,1.09e-21,98;UBERON:0003061,1.09e-21,98;UBERON:0002405,7.74e-16,93;UBERON:0002371,8.53e-14,76;UBERON:0003081,2.15e-13,203;UBERON:0001474,2.84e-13,82;UBERON:0004765,1.30e-10,90;UBERON:0001434,2.21e-08,100;UBERON:0002384,5.30e-08,371;UBERON:0000178,7.40e-08,15;UBERON:0000179,7.40e-08,15;UBERON:0000463,7.40e-08,15 | |||
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| |||
|short_description=p3@ZC3H4 | |||
}} |
Revision as of 00:08, 21 January 2014
Short description: | p3@ZC3H4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZC3H4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002pgb.1_5end |
EntrezGene: | ZC3H4 |
HGNC: | 17808 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.25e-32 | 177 |
hematopoietic stem cell | 5.42e-31 | 168 |
hematopoietic oligopotent progenitor cell | 2.16e-30 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-30 | 161 |
leukocyte | 3.62e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 3.11e-23 | 120 |
nongranular leukocyte | 1.55e-22 | 115 |
myeloid cell | 4.59e-21 | 108 |
common myeloid progenitor | 4.59e-21 | 108 |
myeloid leukocyte | 2.30e-18 | 72 |
classical monocyte | 3.20e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.20e-16 | 42 |
myeloid lineage restricted progenitor cell | 4.37e-16 | 66 |
granulocyte monocyte progenitor cell | 4.64e-15 | 67 |
defensive cell | 1.30e-14 | 48 |
phagocyte | 1.30e-14 | 48 |
monopoietic cell | 2.16e-13 | 59 |
monocyte | 2.16e-13 | 59 |
monoblast | 2.16e-13 | 59 |
promonocyte | 2.16e-13 | 59 |
macrophage dendritic cell progenitor | 8.85e-13 | 61 |
motile cell | 2.09e-10 | 386 |
lymphocyte | 8.69e-09 | 53 |
common lymphoid progenitor | 8.69e-09 | 53 |
mesenchymal cell | 1.97e-08 | 354 |
lymphoid lineage restricted progenitor cell | 2.51e-08 | 52 |
connective tissue cell | 4.50e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.23e-22 | 108 |
hematopoietic system | 1.09e-21 | 98 |
blood island | 1.09e-21 | 98 |
immune system | 7.74e-16 | 93 |
bone marrow | 8.53e-14 | 76 |
lateral plate mesoderm | 2.15e-13 | 203 |
bone element | 2.84e-13 | 82 |
skeletal element | 1.30e-10 | 90 |
skeletal system | 2.21e-08 | 100 |
connective tissue | 5.30e-08 | 371 |
blood | 7.40e-08 | 15 |
haemolymphatic fluid | 7.40e-08 | 15 |
organism substance | 7.40e-08 | 15 |