FFCP PHASE1:Hg19::chr19:54876657..54876679,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3903 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6477 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENST00000463489_5end | |||
|coexpression_cluster_id=C3822 | |||
|description=CAGE_peak_5_at_LAIR1_5end | |||
|id=chr19:54876657..54876679,- | |||
|ontology_enrichment_celltype=CL:0000763!2.22e-51!112;CL:0000049!2.22e-51!112;CL:0000839!4.51e-46!70;CL:0000766!2.43e-45!76;CL:0000557!2.00e-43!71;CL:0002194!3.72e-43!63;CL:0000576!3.72e-43!63;CL:0000040!3.72e-43!63;CL:0000559!3.72e-43!63;CL:0002009!4.19e-41!65;CL:0000037!2.68e-40!172;CL:0000566!2.68e-40!172;CL:0002057!3.18e-40!42;CL:0002032!4.40e-38!165;CL:0000837!4.40e-38!165;CL:0000988!1.04e-36!182;CL:0000860!2.81e-36!45;CL:0000738!1.36e-28!140;CL:0002031!1.63e-28!124;CL:0002087!9.59e-28!119;CL:0000134!3.81e-08!358;CL:0002320!1.96e-07!365;CL:0002393!2.66e-07!9;CL:0002397!2.66e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.51e-55;33!CL:0002057;7.51e-55;33!CL:0000473;3.88e-54;39!CL:0000234;3.88e-54;39!CL:0000576;1.41e-44;48!CL:0000766;2.82e-31;69!CL:0000763;1.07e-25;100!CL:0000235;2.29e-11;6!CL:0002087;8.37e-10;104!CL:0000738;2.50e-09;136!CL:0000136;3.95e-08;13!CL:0000988;1.49e-07;177!CL:0002393;6.16e-07;6!CL:0002397;6.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.19e-74,108;CL:0000049,2.19e-74,108;CL:0002194,2.88e-73,59;CL:0000576,2.88e-73,59;CL:0000040,2.88e-73,59;CL:0000559,2.88e-73,59;CL:0000839,1.25e-71,66;CL:0002009,2.36e-70,61;CL:0000473,6.06e-70,48;CL:0000234,6.06e-70,48;CL:0000557,6.82e-68,67;CL:0000766,4.39e-67,72;CL:0000860,1.12e-59,42;CL:0002057,1.12e-59,42;CL:0000037,6.81e-49,168;CL:0002032,2.57e-47,161;CL:0000837,2.57e-47,161;CL:0000988,2.78e-45,177;CL:0002087,5.35e-37,115;CL:0002031,3.51e-36,120;CL:0000738,5.85e-34,136;CL:0000134,2.36e-18,354;CL:0002320,1.48e-17,361;CL:0000219,9.11e-15,386;CL:0000034,5.32e-12,441;CL:0000048,2.09e-11,427;CL:0000235,2.30e-11,6;CL:0000723,5.99e-11,433;CL:0000136,7.52e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;3.13e-43;42!CL:0000049;2.01e-21;108 | |||
|ontology_enrichment_disease=DOID:8692!7.68e-11!31;DOID:1240!1.15e-10!39;DOID:2531!1.05e-07!51;DOID:0060083!1.05e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.01e-13;31!DOID:1240;3.44e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.80e-13,31;DOID:1240,2.47e-12,39;DOID:2531,3.42e-09,51;DOID:0060083,3.42e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.19e-39!102;UBERON:0003061!5.19e-39!102;UBERON:0002371!8.21e-39!80;UBERON:0002193!5.00e-36!112;UBERON:0001474!2.19e-35!86;UBERON:0002405!4.07e-29!115;UBERON:0007023!7.60e-29!115;UBERON:0004765!2.32e-27!101;UBERON:0001434!2.32e-27!101;UBERON:0002204!7.22e-11!167;UBERON:0003081!2.98e-10!216;UBERON:0001049!6.83e-08!57;UBERON:0005068!6.83e-08!57;UBERON:0006241!6.83e-08!57;UBERON:0007135!6.83e-08!57;UBERON:0002384!7.30e-07!375;UBERON:0002780!7.95e-07!41;UBERON:0001890!7.95e-07!41;UBERON:0006240!7.95e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.23e-62,76;UBERON:0002390,7.55e-58,98;UBERON:0003061,7.55e-58,98;UBERON:0001474,8.07e-57,82;UBERON:0002405,7.33e-52,93;UBERON:0002193,8.88e-51,108;UBERON:0004765,2.86e-50,90;UBERON:0001434,1.47e-43,100;UBERON:0003081,3.51e-22,203;UBERON:0002204,2.24e-21,167;UBERON:0002384,3.34e-17,371;UBERON:0000926,2.28e-11,315;UBERON:0004120,2.28e-11,315;UBERON:0006603,2.28e-11,315 | |||
|phase1_expression=0,2.35510576280081,0.422863212287913,0,0.893922188854576,0,10.1319951267324,1.26343974685366,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,2.75354993794233,1.91914699048606,2.78669021968937,0,0,0,0,0,4.40400659002271,6.09394949385065,7.62068900386538,1.95309783644267,8.73270349535705,5.83008598834163,5.92423805558629,9.59628375945127,20.4053009591957,17.7086364667106,29.9833457608333,37.0051099219643,41.1909473290488,15.5353891853961,15.1134816852169,17.4996850117553,27.5796544589295,28.4013260776883,28.4395621848118,17.8830222565474,20.4679612543384,18.4273257244969,33.3631442684284,34.9812639512942,28.1308335351578,4.28806690242731,12.5662104301628,11.5080682643827,56.5908015325739,24.397564661719,22.4216009638407,15.5774172459181,21.9022825736485,21.0673179363963,30.8753746343018,25.411156883142,18.3548184715713,1.47878700418359,0.637812899895131,2.51590374610051,2.02191536063691,2.55300717830561,5.78612112109488,0.285012743741249,0.59675003159727,0.91332076882317,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0,0,1.32171328579026,2.24203425192614,6.58460211937693,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0.150575119077773,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0.348259474598534,1.06366368415092,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,10.8335482678455,14.0402559083543,16.0521655271827,0,0,0,0,0,0,0,0.704387472105808,0.414656231081544,1.44119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,13.0586843772353,10.5416969741516,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.94142780736755,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,1.8300481571743,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.60044461320525,0,0,0,0,1.01489521846434,1.52927441428475,0,1.42939065274673,0.822724546172388,0,0,0,0,0,0,0,0.721346064882224,0.0711418433484141,1.11598390910176,0.997896857164083,9.38376313648597,5.08016598537319,24.3466455205917,11.5126843026518,5.47763229679661,7.99067468442419,2.50634477090067,0.338583555603207,17.0223359609922,15.5385774537107,8.0910785161162,11.3356763769402,16.8982420369652,14.0915947972222,18.0197073048861,6.25241905286529,0,0,0.270455678475983,0,0,0,5.86032717087576,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0.988823245360557,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,17.3934605877136,0.493217028184668,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0.964771509003264,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,0.153900517007594,0.569710279235006,0,0,0,0,0,1.06606955203727,4.08773192782946,3.1396051279005,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0.104421949505455,0.337005664903385,1.60515529459758,0,0,0,0,0,0,0,2.90658266291045,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,1.23214841002794,3.83239764200917,0,0,0,2.06244381610515,0.717873024576814,0.399358000997982,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0.236349546921671,0,0.0674035438541849,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.262272940674991,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0.146552233678082,0,0.646414781807753,0.52893040697076,0,0,2.66968531419237,0.314408610199332,2.89967338743037,0.496166021811951,0,0,0,25.0248189549958,26.5731287664062,31.8599399834,18.6887399504589,0,0,0.244052529803926,0.3755727921195,1.14681839138014,0.665574309221114,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77398497204766,1.20550485762571,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0.256916900385838,1.41696576325585,0.638535436228605,0.615349092722265,0,0,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.601682626794058,0,0,0,0,0,0.135075169236789,0,0,0.253663240775627,0,0.548257766857182,0.992422356778588,0,0,0,0.672567444437648,0.606965604236632,0.682986574053893,0.79832133146375,0,0,0,0.0657727735628491,0,0,0.313972371402056,0.314231179832004,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,1.1598144313382,2.91426595835484,0,0,0,0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| |||
|short_description=p5@LAIR1 | |||
}} |
Revision as of 01:04, 21 January 2014
Short description: | p5@LAIR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LAIR1_5end |
Coexpression cluster: | C3822_CD14_Macrophage_mature_acute_Monocytederived_biphenotypic_granulocyte |
Association with transcript: | 17bp_to_ENST00000463489_5end |
EntrezGene: | LAIR1 |
HGNC: | 6477 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.19e-74 | 108 |
common myeloid progenitor | 2.19e-74 | 108 |
monopoietic cell | 2.88e-73 | 59 |
monocyte | 2.88e-73 | 59 |
monoblast | 2.88e-73 | 59 |
promonocyte | 2.88e-73 | 59 |
myeloid lineage restricted progenitor cell | 1.25e-71 | 66 |
macrophage dendritic cell progenitor | 2.36e-70 | 61 |
defensive cell | 6.06e-70 | 48 |
phagocyte | 6.06e-70 | 48 |
granulocyte monocyte progenitor cell | 6.82e-68 | 67 |
myeloid leukocyte | 4.39e-67 | 72 |
classical monocyte | 1.12e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-59 | 42 |
hematopoietic stem cell | 6.81e-49 | 168 |
hematopoietic oligopotent progenitor cell | 2.57e-47 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-47 | 161 |
hematopoietic cell | 2.78e-45 | 177 |
nongranular leukocyte | 5.35e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 3.51e-36 | 120 |
leukocyte | 5.85e-34 | 136 |
mesenchymal cell | 2.36e-18 | 354 |
connective tissue cell | 1.48e-17 | 361 |
motile cell | 9.11e-15 | 386 |
stem cell | 5.32e-12 | 441 |
multi fate stem cell | 2.09e-11 | 427 |
macrophage | 2.30e-11 | 6 |
somatic stem cell | 5.99e-11 | 433 |
fat cell | 7.52e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.23e-62 | 76 |
hematopoietic system | 7.55e-58 | 98 |
blood island | 7.55e-58 | 98 |
bone element | 8.07e-57 | 82 |
immune system | 7.33e-52 | 93 |
hemolymphoid system | 8.88e-51 | 108 |
skeletal element | 2.86e-50 | 90 |
skeletal system | 1.47e-43 | 100 |
lateral plate mesoderm | 3.51e-22 | 203 |
musculoskeletal system | 2.24e-21 | 167 |
connective tissue | 3.34e-17 | 371 |
mesoderm | 2.28e-11 | 315 |
mesoderm-derived structure | 2.28e-11 | 315 |
presumptive mesoderm | 2.28e-11 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.80e-13 | 31 |
leukemia | 2.47e-12 | 39 |
hematologic cancer | 3.42e-09 | 51 |
immune system cancer | 3.42e-09 | 51 |