FFCP PHASE1:Hg19::chr2:9695820..9695831,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6868 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=195 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=71bp_to_ENST00000478059_5end | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_5_at_ADAM17_5end | |||
|id=chr2:9695820..9695831,- | |||
|ontology_enrichment_celltype=CL:0002057!3.49e-17!42;CL:0000860!4.49e-17!45;CL:0002194!2.90e-14!63;CL:0000576!2.90e-14!63;CL:0000040!2.90e-14!63;CL:0000559!2.90e-14!63;CL:0002009!4.10e-14!65;CL:0000557!1.42e-13!71;CL:0000839!1.68e-13!70;CL:0000766!3.73e-13!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-29;33!CL:0002057;1.05e-29;33!CL:0000473;4.71e-24;39!CL:0000234;4.71e-24;39!CL:0000576;5.51e-17;48!CL:0000766;1.33e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.08e-32,42;CL:0002057,3.08e-32,42;CL:0000473,1.89e-31,48;CL:0000234,1.89e-31,48;CL:0002009,7.18e-24,61;CL:0002194,3.42e-23,59;CL:0000576,3.42e-23,59;CL:0000040,3.42e-23,59;CL:0000559,3.42e-23,59;CL:0000557,1.14e-22,67;CL:0000839,1.64e-21,66;CL:0000766,1.53e-20,72;CL:0000763,1.61e-11,108;CL:0000049,1.61e-11,108;CL:0002031,2.25e-09,120;CL:0002087,3.25e-09,115;CL:0000738,1.19e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;4.56e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.57e-11!80;UBERON:0002193!6.54e-10!112;UBERON:0001474!7.08e-10!86;UBERON:0002390!1.64e-09!102;UBERON:0003061!1.64e-09!102;UBERON:0000468!5.35e-09!659;UBERON:0004765!9.54e-08!101;UBERON:0001434!9.54e-08!101;UBERON:0002405!2.72e-07!115;UBERON:0000922!6.72e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.59e-20,76;UBERON:0001474,4.20e-18,82;UBERON:0002405,5.16e-18,93;UBERON:0002193,2.70e-17,108;UBERON:0004765,6.86e-17,90;UBERON:0002390,6.98e-17,98;UBERON:0003061,6.98e-17,98;UBERON:0001434,3.26e-14,100;UBERON:0003081,5.44e-10,203;UBERON:0000926,2.36e-08,315;UBERON:0004120,2.36e-08,315;UBERON:0006603,2.36e-08,315;UBERON:0002204,3.06e-08,167 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.704772020479856,0,1.34088328328186,0,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,1.34465029290355,0,1.46062018077475,0.487932798790507,0.123121058076788,0,0.313454721478088,0.572471974262113,0.273748850145768,0.502170558379211,0.0764134057479513,0,0,0.393364276848904,0,0.77408061658038,0,0.30120591877825,1.10926203050036,1.23947520928483,0.568676929949686,0.293600439334847,1.66198622559563,2.4065333696417,1.51907609501096,0.447830948479849,0.32389366601898,0.515151135268373,2.03557534291391,0.755751887377619,1.94067248950253,1.39457422143411,1.6446715520873,3.40677007984614,4.31538588483226,0.512321413058201,6.14853797710322,8.27389633767885,1.93645405075148,9.47985406160392,1.50593871634084,0.545812300115692,0.898893937780338,4.28517449319264,1.92557416245656,6.39337125799041,1.31940520074686,0.398927315243264,1.70489900213078,9.57690487474327,2.8369261234557,5.60540024096017,3.51748131359441,2.08593167368081,3.04064382587163,3.63239701580021,2.57794345191295,6.96217252369946,0.211255286311942,0.212604299965044,0,0.673971786878971,0.300353785683013,0.48217676009124,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0,0,2.3858578411533,0.486634870302636,0.283604451492204,0.665188192387692,0.43917392846563,0.261958150995425,0,0,0.324547393654683,0.348259474598534,0.930705723632056,0.715471872916026,0,0,0.79504962946682,0,1.04142150482278,0,0,0.275118041940067,1.04497483268405,1.03366703667732,1.06729878806013,0.66944122552934,1.61131726843659,0,0.976248230192678,1.83831540172934,0,0.803697554556718,0,0.112611480483322,0,0,0.366403487860815,0,3.87780264148325,0,0,0.25326102332916,1.85372853138506,2.0078563452417,0.709336764396714,0,0,0,0,0.808264032418128,0.163461903113459,0.605429710579726,0,0.234321431833797,0.312160076830321,0,0,0.469737994575059,0.323745888736263,0.702254033511242,0.204154171254893,0.122834317311768,0.413303124703062,0,0.247266929278557,0,0,0.168336113954066,0.625592599359821,0,0,0,0.150238058906597,0.680593098960126,1.07633781413317,0.213557388818567,0,0,0.618315175430633,0.772921620136887,0,1.18143432568886,0.68205903612839,0.252433774244115,0.552299391853796,0.80823028409406,0.710019185033229,0.302256294682921,0.169560592310488,0.193260853163297,0,0.573609190778008,0.975789649036763,0.530119073285941,0.580969714347592,1.55491582523056,0.252320850875628,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.882926198829301,0.737930631258681,0.171567810298526,0.219500570817251,0,0.100528972411631,0.370353780634118,0.325808305310325,0,0,1.15930404975077,0.587043471179108,1.15493158208859,0.925971025153221,0.570762456703795,0,0,0.738651018262192,1.17002132569619,0.148631162288728,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,1.15014803749563,13.3019074231905,0.528290604079356,0.207328115540772,0.288239906833923,0.12624243342638,0.190493682876507,0,0,0,0.205654985406647,0.600686115687835,0,0.336393253036082,0.43596006883328,0.2933531432838,0.775630294546667,0,0.845302752556,0.26593811658487,0,0,0,0,0.428933980974443,1.08524321078289,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,2.10833939483032,0.479249710983165,1.14861935834114,0,0.289562613335158,0.61642896765115,1.07436577943937,0,0,0,0.513372145118994,0.76228387266739,0,0,0.335032530668698,0,0,0,0.828831026872071,0.36807447515742,2.00068208423871,0.813795071099207,0.831883446123229,0.713715955188647,0.157702415033935,0.35142424497814,0,0,1.03473071292505,0,0,0.260650843404249,0,0.343143423810856,0.413536052245775,0.647142602455851,1.17400313583789,0.303127571446259,0,0.30239029332968,0.496215615637554,1.07423381301644,1.12264037773229,1.15325234330131,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0,0.232420756919918,1.57117284469109,1.00253235151642,0.460404944679482,0.459257792658427,0.728364672026868,0.393373244878272,0,0,0,0,0.73886140225013,1.13733384070897,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0.656029291399411,0.325378394664303,0.515205058238611,0.183138929636687,0.330037999682352,0,0.650060246036521,0,1.06337790121334,0.308097234229289,0.307007349452259,0.689182862422653,0.429680979473094,0,0.511359764496605,0.623224249527161,1.15699440752685,0.768760269460425,1.02090169995667,0.6069466851333,0,0.31481234683064,0,0.924100740528266,0,0.869932992075073,0,0.715624433709956,0,0,0.190630193923825,0,0.42793898803392,0,0.78494864019923,0.359744915166629,1.37268514868027,0.353437207037059,0.404364963146632,0,0.842516912477962,0,0.243713489631284,0,0.409499734223957,0.424216295861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| |||
|short_description=p5@ADAM17 | |||
}} |
Revision as of 01:39, 21 January 2014
Short description: | p5@ADAM17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ADAM17_5end |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | 71bp_to_ENST00000478059_5end |
EntrezGene: | ADAM17 |
HGNC: | 195 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.08e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.08e-32 | 42 |
defensive cell | 1.89e-31 | 48 |
phagocyte | 1.89e-31 | 48 |
macrophage dendritic cell progenitor | 7.18e-24 | 61 |
monopoietic cell | 3.42e-23 | 59 |
monocyte | 3.42e-23 | 59 |
monoblast | 3.42e-23 | 59 |
promonocyte | 3.42e-23 | 59 |
granulocyte monocyte progenitor cell | 1.14e-22 | 67 |
myeloid lineage restricted progenitor cell | 1.64e-21 | 66 |
myeloid leukocyte | 1.53e-20 | 72 |
myeloid cell | 1.61e-11 | 108 |
common myeloid progenitor | 1.61e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 2.25e-09 | 120 |
nongranular leukocyte | 3.25e-09 | 115 |
leukocyte | 1.19e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.59e-20 | 76 |
bone element | 4.20e-18 | 82 |
immune system | 5.16e-18 | 93 |
hemolymphoid system | 2.70e-17 | 108 |
skeletal element | 6.86e-17 | 90 |
hematopoietic system | 6.98e-17 | 98 |
blood island | 6.98e-17 | 98 |
skeletal system | 3.26e-14 | 100 |
lateral plate mesoderm | 5.44e-10 | 203 |
mesoderm | 2.36e-08 | 315 |
mesoderm-derived structure | 2.36e-08 | 315 |
presumptive mesoderm | 2.36e-08 | 315 |
musculoskeletal system | 3.06e-08 | 167 |