FFCP PHASE1:Hg19::chr20:34304613..34304617,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_at_chr20:34304613..34304617,- | |||
|id=chr20:34304613..34304617,- | |||
|ontology_enrichment_celltype=CL:0002087!5.29e-17!119;CL:0000037!8.11e-17!172;CL:0000566!8.11e-17!172;CL:0000738!5.68e-16!140;CL:0000988!1.78e-15!182;CL:0002032!2.24e-15!165;CL:0000837!2.24e-15!165;CL:0002031!3.79e-15!124;CL:0000860!9.06e-12!45;CL:0002057!1.41e-11!42;CL:0000542!6.81e-09!53;CL:0000051!6.81e-09!53;CL:0000838!1.35e-08!52;CL:0002009!3.97e-08!65;CL:0002194!1.29e-07!63;CL:0000576!1.29e-07!63;CL:0000040!1.29e-07!63;CL:0000559!1.29e-07!63;CL:0000766!1.30e-07!76;CL:0000763!1.40e-07!112;CL:0000049!1.40e-07!112;CL:0000557!3.70e-07!71;CL:0000839!5.42e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.68e-10;3!CL:0000860;5.83e-08;33!CL:0002057;5.83e-08;33!CL:0002087;3.29e-07;104!CL:0000738;3.33e-07;136!CL:0000542;3.44e-07;53!CL:0000576;4.43e-07;48!CL:0000473;7.07e-07;39!CL:0000234;7.07e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.87e-25,136;CL:0002087,1.34e-22,115;CL:0000037,5.42e-22,168;CL:0000988,2.54e-20,177;CL:0002031,7.22e-20,120;CL:0002032,3.91e-18,161;CL:0000837,3.91e-18,161;CL:0000860,5.68e-12,42;CL:0002057,5.68e-12,42;CL:0000473,1.19e-11,48;CL:0000234,1.19e-11,48;CL:0000838,2.40e-11,52;CL:0000542,4.68e-11,53;CL:0000051,4.68e-11,53;CL:0000766,5.78e-11,72;CL:0002009,8.24e-11,61;CL:0000623,1.68e-10,3;CL:0000825,1.68e-10,3;CL:0002194,7.31e-10,59;CL:0000576,7.31e-10,59;CL:0000040,7.31e-10,59;CL:0000559,7.31e-10,59;CL:0000557,1.78e-09,67;CL:0000839,2.03e-08,66;CL:0000763,2.54e-08,108;CL:0000049,2.54e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.85e-08;42!CL:0000051;3.44e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.45e-11!235;DOID:14566!5.60e-11!239;DOID:0050687!7.73e-09!143;DOID:0050686!1.54e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-07!102;UBERON:0003061!1.17e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.23e-09,98;UBERON:0003061,1.23e-09,98;UBERON:0002371,6.24e-09,76;UBERON:0002193,2.95e-08,108;UBERON:0001474,5.73e-08,82;UBERON:0004765,6.81e-07,90 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.410623275218653,0.376627918784408,0.0764134057479513,0,0.0787107813136792,0.393364276848904,1.15148819429164,0.464448369948228,0,0,0,0.387336002901508,1.27952309238679,1.17440175733939,0,4.21143339687298,2.82114131930607,0.223915474239924,0,0,1.16318591023652,0.377875943688809,0.485168122375632,0.697287110717054,0.411167888021826,1.23882548358041,1.7261543539329,1.0246428261164,0.709446689665756,1.03423704220986,0.645484683583826,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,1.22433556948361,0.320929027076094,0.639337125799041,0.329851300186716,0.598390972864896,1.27867425159808,0.580418477257168,0,1.86846674698672,1.50749199154046,0.521482918420201,0.434377689410233,0,0.368277635987565,0,1.05627643155971,0.637812899895131,0.209658645508376,1.01095768031846,0.600707571366025,0.16072558669708,2.28010194992999,0.79566670879636,0,1.75996244461323,1.09227722252426,0,0.853460445133014,0.400395987036012,0.574752439954483,0,0,2.27685187643779,5.28513470433845,1.91136614062614,0,2.24203425192614,0,2.16380747125216,6.6811829667358,3.90642848099067,0,0,2.36723902867367,0,0.111410456885174,0.589211814949674,1.32920336750173,0.541607727530031,0.128091319725675,0.390178042679635,0.328875809207352,0.552700035571697,0,0.444859689486181,0.267540828089713,0,0,0.766440987203842,2.06176467289578,0.253019692019503,0.95569624297229,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0,0,1.41124720257313,5.34880391567015,3.47578569318718,0,0,0,0.361439152384566,0,0.144846518960824,0,0.973269740605272,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0.26591592103773,1.43094374583205,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0,0.860509862246441,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0.117434498643765,0.323745888736263,0,0,0.61417158655884,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.612975591598039,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0.337552664482532,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0.590789906681404,4.85609409356116,0.368965315629341,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,1.20137223137567,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0.289562613335158,0.410952645100767,0,0.112085143993527,2.1673383622212,4.9594342217689,4.49200626979119,0,0,0,0,0,1.49801404789436,8.97484377612075,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0.343143423810856,1.03384013061444,4.74571241800957,0.74709290462411,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,1.48418066444991,0,0.177561725313127,0.0821271560138091,0,0,0.483437798366489,0.200506470303285,0.276242966807689,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0.784306353074702,0.512900250232778,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.767518373630648,0,0.214840489736547,0.290033387828457,0.170453254832202,0,0.165284915360978,0.384380134730212,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0.78494864019923,0,0,0.235624804691373,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0.845086807596724,0.143411352204052,0,0,0,0.422215270595328,0.658589785919804,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,1.23408681925858,0,1.08006287447623,0.79312517629427,0,0,0.245040215981032,0.557409525377156,0.432807638929335,0.640276590135727,0.318852545457645,0.399158742865633,0,1.2700414963433,0.649243880549111,0.842391534340376,0.684704037099577,0.783399478865116,0,0.169291777801603,0.1605880751037,0.605399121573143,0,1.03051603426729,0,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0.540911356951966,0.66614393599564,0,0.18714054040822,0,0.121360521749513,0.222886768554957,0.568272293612826,0,0.296964680832639,0.307160702099232,0,0,0.556543525114529,0.329607748453519,0.844501632511974,0.19924798825107,0.552567831062295,1.0077309914171,0.102268682502155,0.246169610922139,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.61221999997337,0,0.227586896570999,1.01701460117107,0.709163045303809,0.68948674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| |||
|short_description=p@chr20:34304613..34304617,- | |||
}} |
Revision as of 10:59, 21 January 2014
Short description: | p@chr20:34304613..34304617, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:34304613..34304617, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.87e-25 | 136 |
nongranular leukocyte | 1.34e-22 | 115 |
hematopoietic stem cell | 5.42e-22 | 168 |
hematopoietic cell | 2.54e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 7.22e-20 | 120 |
hematopoietic oligopotent progenitor cell | 3.91e-18 | 161 |
hematopoietic multipotent progenitor cell | 3.91e-18 | 161 |
classical monocyte | 5.68e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.68e-12 | 42 |
defensive cell | 1.19e-11 | 48 |
phagocyte | 1.19e-11 | 48 |
lymphoid lineage restricted progenitor cell | 2.40e-11 | 52 |
lymphocyte | 4.68e-11 | 53 |
common lymphoid progenitor | 4.68e-11 | 53 |
myeloid leukocyte | 5.78e-11 | 72 |
macrophage dendritic cell progenitor | 8.24e-11 | 61 |
natural killer cell | 1.68e-10 | 3 |
pro-NK cell | 1.68e-10 | 3 |
monopoietic cell | 7.31e-10 | 59 |
monocyte | 7.31e-10 | 59 |
monoblast | 7.31e-10 | 59 |
promonocyte | 7.31e-10 | 59 |
granulocyte monocyte progenitor cell | 1.78e-09 | 67 |
myeloid lineage restricted progenitor cell | 2.03e-08 | 66 |
myeloid cell | 2.54e-08 | 108 |
common myeloid progenitor | 2.54e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.23e-09 | 98 |
blood island | 1.23e-09 | 98 |
bone marrow | 6.24e-09 | 76 |
hemolymphoid system | 2.95e-08 | 108 |
bone element | 5.73e-08 | 82 |
skeletal element | 6.81e-07 | 90 |