FFCP PHASE1:Hg19::chr20:34330506..34330528,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C875 | |||
|description=CAGE_peak_at_chr20:34330506..34330528,+ | |||
|id=chr20:34330506..34330528,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.27e-32!140;CL:0002031!2.21e-26!124;CL:0002087!5.35e-25!119;CL:0000037!7.46e-25!172;CL:0000566!7.46e-25!172;CL:0002032!6.42e-23!165;CL:0000837!6.42e-23!165;CL:0000988!1.56e-22!182;CL:0000542!5.48e-16!53;CL:0000051!5.48e-16!53;CL:0000838!7.41e-16!52;CL:0000860!4.70e-15!45;CL:0002057!6.71e-15!42;CL:0000766!6.04e-13!76;CL:0000791!1.45e-11!18;CL:0000789!1.45e-11!18;CL:0002420!1.45e-11!18;CL:0002419!1.45e-11!18;CL:0000790!1.45e-11!18;CL:0000839!1.46e-10!70;CL:0000557!1.83e-10!71;CL:0002009!5.48e-10!65;CL:0002194!2.77e-09!63;CL:0000576!2.77e-09!63;CL:0000040!2.77e-09!63;CL:0000559!2.77e-09!63;CL:0000763!4.42e-09!112;CL:0000049!4.42e-09!112;CL:0000625!1.14e-08!11;CL:0000084!2.35e-08!25;CL:0000827!2.35e-08!25;CL:0000236!2.23e-07!14;CL:0000945!3.80e-07!24;CL:0000826!3.80e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.71e-26;18!CL:0000789;2.71e-26;18!CL:0002419;2.71e-26;18!CL:0000625;1.23e-21;11!CL:0000084;1.22e-17;25!CL:0000542;5.75e-15;53!CL:0000860;8.63e-14;33!CL:0002057;8.63e-14;33!CL:0002087;7.78e-13;104!CL:0000236;1.32e-11;13!CL:0000766;1.37e-11;69!CL:0000738;5.02e-10;136!CL:0000094;6.17e-10;8!CL:0000473;1.03e-09;39!CL:0000234;1.03e-09;39!CL:0000576;1.64e-09;48!CL:0000624;2.13e-08;6!CL:0000623;5.76e-07;3!CL:0000081;5.82e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.27e-48,136;CL:0002031,2.28e-37,120;CL:0000037,3.70e-37,168;CL:0000988,2.43e-34,177;CL:0002087,3.18e-34,115;CL:0002032,1.49e-33,161;CL:0000837,1.49e-33,161;CL:0000791,3.74e-27,18;CL:0000789,3.74e-27,18;CL:0002420,3.74e-27,18;CL:0002419,3.74e-27,18;CL:0000790,3.74e-27,18;CL:0000838,1.10e-24,52;CL:0000542,4.69e-24,53;CL:0000051,4.69e-24,53;CL:0000625,3.91e-22,11;CL:0000766,3.51e-20,72;CL:0000860,6.98e-19,42;CL:0002057,6.98e-19,42;CL:0000084,3.13e-18,25;CL:0000827,3.13e-18,25;CL:0000473,1.03e-15,48;CL:0000234,1.03e-15,48;CL:0000557,4.34e-14,67;CL:0000839,3.11e-13,66;CL:0000134,1.55e-12,354;CL:0000763,2.85e-12,108;CL:0000049,2.85e-12,108;CL:0002320,6.06e-12,361;CL:0002009,7.30e-12,61;CL:0002194,2.49e-11,59;CL:0000576,2.49e-11,59;CL:0000040,2.49e-11,59;CL:0000559,2.49e-11,59;CL:0000236,7.42e-11,14;CL:0000219,2.05e-10,386;CL:0000094,3.56e-10,8;CL:0000034,4.40e-10,441;CL:0000723,2.04e-09,433;CL:0000048,2.63e-09,427;CL:0000624,8.62e-09,6;CL:0000623,3.41e-07,3;CL:0000825,3.41e-07,3;CL:0000081,3.97e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.71e-26;18!CL:0002057;1.68e-15;42!CL:0000051;5.75e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.29e-11!102;UBERON:0003061!1.29e-11!102;UBERON:0002193!1.43e-11!112;UBERON:0002371!8.55e-09!80;UBERON:0001474!2.55e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.06e-15,98;UBERON:0003061,4.06e-15,98;UBERON:0002193,7.25e-13,108;UBERON:0002371,1.02e-12,76;UBERON:0001474,2.90e-11,82;UBERON:0002384,3.86e-11,371;UBERON:0002405,4.38e-10,93;UBERON:0004765,1.21e-09,90;UBERON:0003081,4.12e-08,203;UBERON:0001434,5.26e-08,100 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0.261185628199839,0.491467873003018,1.39560233594486,0,0,0.37129905888014,0,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0.940364164434263,0.286235987131057,0.273748850145768,0.251085279189606,0.229240217243854,0.410502947249729,0.550975469195755,2.75354993794233,0.383829398097213,1.85779347979291,0,0.30120591877825,0.369754010166788,0.154934401160603,0.284338464974843,1.76160263600908,2.76997704265939,1.60435557976113,2.60413044859022,0.223915474239924,0.971680998056939,0.77272670290256,0.726991193897824,1.13362783106643,0.727752183563449,0.697287110717054,0.822335776043652,1.23882548358041,0.575384784644301,1.5369642391746,3.54723344832878,0.344745680736619,1.93645405075148,1.35426486594342,2.25890807451126,0.818718450173537,2.24723484445085,0,1.28371610830437,0,0.989553900560148,0.598390972864896,0.852449501065388,2.61188314765726,0.56738522469114,3.11411124497787,1.25624332628372,0,1.73751075764093,1.21079900526674,2.20966581592539,1.58231193720442,0,0.850417199860174,2.51590374610051,1.01095768031846,0.600707571366025,1.12507910687956,0.285012743741249,0.19891667719909,1.0959849225878,1.75996244461323,4.36910889009705,5.33705552318133,0.853460445133014,2.40237592221607,2.87376219977242,1.98313461835459,2.86216126360609,1.1384259382189,0.587237189370939,1.14681968437569,3.96513985737078,2.24203425192614,0.263384084775077,2.75393678159366,1.96505381374582,1.85041349099558,0.668745981562712,1.30368906653436,0.946895611469467,0,0.779873198196215,0.883817722424512,1.77227115666897,2.97884250141517,0.25618263945135,0.390178042679635,0.164437904603676,0,0.869409257205157,1.77943875794473,2.40786745280742,2.09071047609954,0.339928028092699,3.06576394881537,2.74901956386104,1.01207876807801,1.59282707162048,2.60433381542567,2.85135613334512,1.95747654801105,4.09557155694139,1.24930726552346,2.36777252044017,4.10563998460523,4.43534835094411,1.60464117470104,2.75166367377318,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.283604451492204,0,0,0.523916301990851,0,0.370784442784429,0,0,0,0.953962497221368,3.43196946468077,2.22874500797739,0.79504962946682,0,0.347140501607594,1.13061588384802,0,1.6507082516404,0.417989933073621,0.516833518338658,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.183201743930407,3.9534125230819,7.75560528296651,0,0,0.25326102332916,1.05927344650575,0,0,1.12135520028461,2.1349799145941,0.49333509683432,0,0.269421344139376,0,0.302714855289863,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.408308342509787,0.859840221182376,0.516628905878827,0,0.247266929278557,0.910161361938026,0.718618141816238,0.336672227908132,0.500474079487857,0.277064115484183,0,0,0,0,0,0.427114777637135,0.423863802319124,0,0.412210116953756,0.257640540045629,0,0.337552664482532,0.389748020644795,0,0.276149695926898,0.161646056818812,0.355009592516614,0.403008392910561,0.508681776931463,0.193260853163297,0,0,0.121973706129595,0,0.232387885739037,0.414644220061482,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0.784885860501384,0.38474715694639,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0.368965315629341,0,0.548751427043128,1.1240175325762,0.100528972411631,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,1.58040879591855,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0,0.766765358330422,0,0.176096868026452,3.31724984865235,3.89123874225796,2.27236380167484,0.063497894292169,0,1.17217447210047,0,0,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0,0,1.64648067356154,0,0,0,0.904318131178758,0,0.499864955910285,0,0,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.537182889719687,0.112085143993527,2.95546140302891,2.37190332345469,1.66845947163673,0.254094624222463,0,0,0,0.637938751653163,5.99205619157746,0,4.97298616123243,0.12269149171914,0,0,0,0,0.473107245101804,0,0,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0.391602314925481,0,1.24060815673732,0.431428401637234,0.320182673410333,0.606255142892519,0,0,0,0.460385919864187,1.12264037773229,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.846016147141356,0,0.460404944679482,0.34444334449382,0,0.524497659837696,0,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0.657779629937804,0.261435451024901,0,0.984043937099117,0,0.618246069886334,0,0.577566499444116,1.14853107599234,0,0,0.290012154876366,0,0.307007349452259,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.330569830721956,0,0.127612712494584,0.10115778085555,0,0,1.3940745403212,1.23213432070436,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0.511795582622668,0,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.141405431953713,0,1.10273068709225,0,0.876901770507525,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,1.07001315444375,0.354761064070598,0,0.329294892959902,0.75894634753143,0.699869440489966,0.384888450902048,1.34060455107157,0,0.188287601553558,0,0,0,0,1.52234282769651,1.52927441428475,0.569647187174163,0.238231775457789,0.411362273086194,1.29694662238543,2.70015718619057,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0,0.399158742865633,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0.626719583092093,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0.36408156524854,0.445773537109913,0.284136146806413,0,0,0,0,0.422008249231538,0.222617410045812,0.494411622680279,0,0.398495976502139,0.552567831062295,0.503865495708552,0.20453736500431,0.492339221844278,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0.291604613383254,0.347249989866585,0.885741385813839,0.361789315876224,0,0.552896299656123,0,0.219385397153973,0.21787692703798,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0.183195186803725,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,0,0.326465616318295,0,0.216388639742091,0,0.0884575645033392,0,0,0,0.104421949505455,0.404406797884062,0,0,0.91227394607833,0,0,0.394584402849391,0,0,0.505492637027904,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0.51595809741485,0.290268993867255,0.438535902517113,0.246346371159628,0,0,0.225980740780532,0.137041924646751,0,0.379864775735272,0.195551382734803,0.0801588202515337,0,0,0,0.343609788497747,0,0.432164393964449,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.254019996197353,0,0.408610218334727,0,0,0,1.1248694577575,0.77380195455795,0.364497339948148,0.335434687599266,0.157611414598396,0.209818352539992,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0.226624183040251,0,0,0.258565912723101,1.05786081394152,0,0,0.640724475406168,0,0,0,0.197611631897944,0.365377795142688,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0.3755727921195,0,0.443716206147409,0.496771223531068,0.138348634936231,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0.434763085832475,0,0.233713309847224,0,0.378806010550178,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0.813741466409323,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0,0.260994291965212,0,0.463044948647668,0,0,0,0.219284049578707,0.530067437837643,0,1.18259708457151,0.512483037175893,0.345430341731199,0,1.10606748921385,0.974301544196942,1.0629187225069,0.817826971279221,0,0.245772908753719,0,0.19998739585493,0.213383459388282,0.516644938982447,0.567515953566836,0.184105950251841,0.279759015438889,0.622077260032973,0.255788742607303,0.107824811396682,0,0.109209638192014,0.509197589862076,0.212574920101683,0.495743057036009,0,0,0.552032215008773,0,0,0,0.706521476061055,0,0.319267718114302,0.205116364240755,0.252071696221718,0.414943514785307,0,0,0.196295437002051,0.235939446695481,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0,0,0.675375846183947,0,0.413373593002368,0.443910671357348,0,0,0,0.527613733078862,0,0,0.336283722218824,0,1.36597314810779,0,0.115233987555779,0,0.271878931907327,0.131545547125698,0.472775363535873,0.111231401892069,0,0,0,0,0.431855182437243,0.47775168788705,0.285906176706625,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.935757853848423,0.198950775161368,0.237840181555137,0,0,0.301925687133347,0.231522474323834,0,0.470317296361523,0,0,0,0.594092800654172,0,0,0.187967835959707,0.257831551894309,0.299823467774787,0,0,0.0802413666891683,0,0,0.286679166302903,0,0.407948941145488,0.436350690340377,0,0,0,0.432626562123789,0,0.109265571963696,0.126698501011437,0,0,0.0918948995348449,0,0.757786982182394,1.60778478093707,0,0.310298987585686,0.213233981900981,0,0.516711278688049,0.496597714366863,0.224263725161227,0.0636471582781649,0,0.435433495793923,0,0.404112318087525,0.143444410785353,0,0,0.213454691755431,0,0.0898252021065869,0,0.244482888365733,0,0,0,0 | |||
|short_description=p@chr20:34330506..34330528,+ | |||
}} |
Revision as of 10:59, 21 January 2014
Short description: | p@chr20:34330506..34330528, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:34330506..34330528, + |
Coexpression cluster: | C875_Eosinophils_Neutrophils_Mast_CD19_CD14_Basophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.06e-15 | 98 |
blood island | 4.06e-15 | 98 |
hemolymphoid system | 7.25e-13 | 108 |
bone marrow | 1.02e-12 | 76 |
bone element | 2.90e-11 | 82 |
connective tissue | 3.86e-11 | 371 |
immune system | 4.38e-10 | 93 |
skeletal element | 1.21e-09 | 90 |
lateral plate mesoderm | 4.12e-08 | 203 |
skeletal system | 5.26e-08 | 100 |