FFCP PHASE1:Hg19::chr21:42798158..42798174,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4599 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7532 | |||
|TSSclassifier=strong | |||
|UniProt=C9JZS6 | |||
|association_with_transcript=0bp_to_ENST00000441677_5end | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_1_at_MX1_5end | |||
|id=chr21:42798158..42798174,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.17e-29!140;CL:0002087!1.15e-25!119;CL:0002057!2.10e-23!42;CL:0000766!4.19e-23!76;CL:0002031!7.58e-23!124;CL:0002194!2.50e-20!63;CL:0000576!2.50e-20!63;CL:0000040!2.50e-20!63;CL:0000559!2.50e-20!63;CL:0000860!8.61e-20!45;CL:0002009!8.79e-20!65;CL:0000557!4.30e-19!71;CL:0000037!7.99e-18!172;CL:0000566!7.99e-18!172;CL:0000839!1.01e-17!70;CL:0000988!8.68e-17!182;CL:0002032!1.07e-16!165;CL:0000837!1.07e-16!165;CL:0000763!1.20e-10!112;CL:0000049!1.20e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.57e-20;33!CL:0002057;6.57e-20;33!CL:0000473;9.74e-18;39!CL:0000234;9.74e-18;39!CL:0000576;1.13e-14;48!CL:0000766;8.60e-12;69!CL:0002087;3.15e-09;104!CL:0000738;1.90e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.17e-33,136;CL:0002087,5.42e-30,115;CL:0000473,7.81e-28,48;CL:0000234,7.81e-28,48;CL:0000860,1.45e-26,42;CL:0002057,1.45e-26,42;CL:0000766,4.92e-26,72;CL:0002031,6.09e-26,120;CL:0002194,1.01e-23,59;CL:0000576,1.01e-23,59;CL:0000040,1.01e-23,59;CL:0000559,1.01e-23,59;CL:0002009,4.29e-22,61;CL:0000037,1.02e-21,168;CL:0000557,1.60e-20,67;CL:0002032,2.96e-20,161;CL:0000837,2.96e-20,161;CL:0000839,3.26e-20,66;CL:0000988,4.04e-20,177;CL:0000763,6.98e-13,108;CL:0000049,6.98e-13,108;CL:0000838,6.93e-08,52;CL:0000542,1.72e-07,53;CL:0000051,1.72e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;4.93e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.25e-21!102;UBERON:0003061!2.25e-21!102;UBERON:0002193!3.23e-21!112;UBERON:0002371!2.76e-17!80;UBERON:0001474!1.45e-13!86;UBERON:0007023!1.86e-13!115;UBERON:0002405!2.21e-11!115;UBERON:0004765!4.94e-11!101;UBERON:0001434!4.94e-11!101;UBERON:0003081!1.03e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.01e-22,98;UBERON:0003061,3.01e-22,98;UBERON:0002193,4.04e-22,108;UBERON:0002405,8.66e-20,93;UBERON:0002371,2.53e-18,76;UBERON:0001474,4.14e-15,82;UBERON:0004765,2.96e-13,90;UBERON:0007023,2.53e-12,114;UBERON:0001434,1.81e-11,100;UBERON:0003081,2.74e-07,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0.331397375727916,0.672325146451775,1.20538905604795,2.19093027116212,0,3.32426856807327,1.83600622119828,3.44800193625897,0.286235987131057,0.136874425072884,2.63639543149086,26.591865200287,19.8683426468869,20.7009354854976,6.29382842958246,5.37361157336098,6.34746105595912,0,0.30120591877825,0,0.387336002901508,0,1.46800219667424,11.0799081706375,9.6261334785668,12.5866305015194,10.3001118150365,1.94336199611388,0.515151135268373,1.01778767145695,8.31327076115381,26.6842467306598,4.18372266430232,14.3908760807639,27.5638670096642,40.2769349251011,63.0155338061588,177.12519018655,19.6505038019873,28.4013260776883,27.0852973188684,1.69418105588344,13.0994952027766,23.820689351179,101.007684482398,77.3438955253386,250.620153313224,37.9328995214724,84.3731271739503,193.07981199131,124.499763371663,108.937963140699,331.964258714641,37.4360511232547,78.2224377630302,166.80103273353,154.982272674142,150.257275482926,396.843833850869,21.3367839175061,15.5201138974482,25.7880133975302,11.120534483503,16.5194582125657,23.9481124178649,8.26536956849621,14.7198341127327,22.46769091305,1.75996244461323,4.36910889009705,3.55803701545422,2.56038133539904,2.00197993518006,4.02326707968138,2.64417949113945,4.77026877267682,3.98449078376614,5.28513470433845,8.02773779062981,1.32171328579026,63.8979761798951,1.31692042387539,10.0321982758055,11.7903228824749,14.1865034309661,8.19213827414323,10.1035902656413,7.57516489175573,25.3274746930285,5.45911238737351,14.435689466267,16.6150420937716,18.6854665997861,8.83830106107159,16.9077151827842,23.843496167533,7.46145048021791,3.76744011455568,12.0112116161269,11.2367147797679,24.0431704751447,2.26618685395132,8.81407135284419,10.9960782554442,15.6872209052092,1.27426165729639,3.25541726928209,4.75226022224187,4.66782869141096,3.58362511232371,0,2.8413270245282,4.10563998460523,7.05623601286563,9.36040685242276,7.67569340578835,0,0.670700859703636,0,1.80719576192283,0,0,0.795285947051099,0.973269740605272,0.661743720148475,0.443458794925128,1.31752178539689,1.63723844372141,1.45718115317017,0,4.54366351116557,2.08955684759121,13.4287540124054,11.6860405909618,45.7595928624102,15.6012150558417,0.596287222100115,5.16140757063675,0,0,2.51699661725944,0.825354125820202,4.38889429727302,1.29208379584664,3.91342888955381,0.66944122552934,2.41697590265488,0,1.46437234528902,0,0.81014194788176,0.267899184852239,0,0.337834441449967,0,0,0.183201743930407,46.1231461026221,124.089684527464,0.436094052142534,0,0,0,0.860509862246441,2.12801029319014,1.68203280042692,0,0.49333509683432,0,0.67355336034844,0.490385709340376,0.302714855289863,0.576175924479999,6.09235722767871,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,23.7600571456411,14.8360157567134,0,0,0.168336113954066,0,0,0,0,22.9864230127093,0,0.179389635688862,0.213557388818567,0,0.900273288253207,1.44273540933814,0.257640540045629,0.37223371266318,0,0,0,0,0.969876340912871,0,0.302256294682921,0.169560592310488,2.89891279744945,2.18196896472668,0.573609190778008,0.365921118388786,0.132529768321485,0.348581828608555,1.96956004529204,0.504641701751257,0,84.4827474581006,16.0810234548221,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,2.36315962672562,0,0.860919069801795,0.171567810298526,0.219500570817251,0,2.51322431029077,0.370353780634118,106.865124141787,2.07986957055916,0,0.115930404975077,0.469634776943287,5.19719211939866,5.09284063834272,1.52203321787679,0,0,15.511671383506,3.04205544681009,0.594524649154913,0,12.5986596149145,12.9015338490572,0.447792613514241,0,0,1.47798971368783,1.14462964217194,1.03664057770386,0.288239906833923,0.88369703398466,1.46045156871989,14.1335717456563,8.20522130470329,0,1.85089486865982,1.8020583470635,96.895160661766,0,1.74384027533312,0.07333828582095,1.29271715757778,0,0,0.797814349754612,1.04007436911366,0.514414748524284,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0,2.29937879718731,34.0546585795333,15.0677127429638,10.5416969741516,0,0,0,2.60606352001643,0.205476322550383,0,0,7.88123040807709,7.11570997036407,6.28880877770767,0,0,0,0.502548796003046,0,33.7053160776232,17.9496875522415,38.1262272361153,0,0,0,0.415941723061614,0.356857977594324,0,0.234282829985426,0.300946099727719,0,0,0,0,0.173767228936166,7.2446428261214,7.54915532383883,9.30456117552993,10.3542816392936,1.28073069364133,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,6.32259744590888,1.06537035187876,2.29956036838666,2.59627214591811,3.48631135379878,0.120859449591622,1.20303882181971,0.0920809889358963,0.114814448164607,0.182091168006717,0.262248829918848,2.70719767744447,0.308061348417659,0.784349769176855,2.92278449306521,0.949964660035881,1.13733384070897,1.53084334748864,0.647747748306418,0,1.08378575017541,0,1.78413391131527,2.49322802678617,0.895499018888713,0,0,0.256450125116389,0.656029291399411,0,2.26690225624989,0,0,2.29706215198469,3.25030123018261,0,0.386682873168488,0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| |||
|short_description=p1@MX1 | |||
}} |
Revision as of 13:54, 21 January 2014
Short description: | p1@MX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MX1_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000441677_5end |
EntrezGene: | MX1 |
HGNC: | 7532 |
UniProt: | C9JZS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.17e-33 | 136 |
nongranular leukocyte | 5.42e-30 | 115 |
defensive cell | 7.81e-28 | 48 |
phagocyte | 7.81e-28 | 48 |
classical monocyte | 1.45e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.45e-26 | 42 |
myeloid leukocyte | 4.92e-26 | 72 |
hematopoietic lineage restricted progenitor cell | 6.09e-26 | 120 |
monopoietic cell | 1.01e-23 | 59 |
monocyte | 1.01e-23 | 59 |
monoblast | 1.01e-23 | 59 |
promonocyte | 1.01e-23 | 59 |
macrophage dendritic cell progenitor | 4.29e-22 | 61 |
hematopoietic stem cell | 1.02e-21 | 168 |
granulocyte monocyte progenitor cell | 1.60e-20 | 67 |
hematopoietic oligopotent progenitor cell | 2.96e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.96e-20 | 161 |
myeloid lineage restricted progenitor cell | 3.26e-20 | 66 |
hematopoietic cell | 4.04e-20 | 177 |
myeloid cell | 6.98e-13 | 108 |
common myeloid progenitor | 6.98e-13 | 108 |
lymphoid lineage restricted progenitor cell | 6.93e-08 | 52 |
lymphocyte | 1.72e-07 | 53 |
common lymphoid progenitor | 1.72e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.01e-22 | 98 |
blood island | 3.01e-22 | 98 |
hemolymphoid system | 4.04e-22 | 108 |
immune system | 8.66e-20 | 93 |
bone marrow | 2.53e-18 | 76 |
bone element | 4.14e-15 | 82 |
skeletal element | 2.96e-13 | 90 |
adult organism | 2.53e-12 | 114 |
skeletal system | 1.81e-11 | 100 |
lateral plate mesoderm | 2.74e-07 | 203 |