FFCP PHASE1:Hg19::chr22:23523037..23523053,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1014 | |||
|TSSclassifier=weak | |||
|UniProt=A9UF01,E9PGJ4,A9UF04 | |||
|association_with_transcript=-94bp_to_ENST00000290956,ENST00000292697,ENST00000420248_5end | |||
|description=CAGE_peak_3_at_BCR_5end | |||
|id=chr22:23523037..23523053,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002202;7.79e-11;9!CL:0002632;7.79e-11;9!CL:0000307;3.75e-09;3!CL:0002368;2.79e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.41e-10,9;CL:0002632,1.41e-10,9;CL:0000068,1.26e-08,3;CL:0000069,1.26e-08,3;CL:0000307,1.26e-08,3;CL:0000377,1.26e-08,3;CL:0002368,4.11e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;3.75e-09;3!UBERON:0010122;1.28e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.20e-12!241;UBERON:0000477!1.55e-11!286;UBERON:0000025!2.20e-10!194;UBERON:0000064!5.55e-09!219;UBERON:0001049!6.55e-08!57;UBERON:0005068!6.55e-08!57;UBERON:0006241!6.55e-08!57;UBERON:0007135!6.55e-08!57;UBERON:0000483!9.44e-08!309;UBERON:0003075!1.00e-07!86;UBERON:0007284!1.00e-07!86;UBERON:0005743!2.66e-07!86;UBERON:0000119!2.88e-07!312;UBERON:0001017!4.43e-07!82;UBERON:0000153!5.92e-07!129;UBERON:0007811!5.92e-07!129;UBERON:0002616!6.31e-07!59;UBERON:0002780!6.66e-07!41;UBERON:0001890!6.66e-07!41;UBERON:0006240!6.66e-07!41;UBERON:0002346!7.46e-07!90;UBERON:0007023!8.34e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;4.79e-16;9!UBERON:0007245;4.79e-16;9!UBERON:0010009;4.79e-16;9!UBERON:0010011;4.79e-16;9!UBERON:0000454;4.79e-16;9!UBERON:0009663;9.68e-16;7!UBERON:0000369;1.42e-13;4!UBERON:0002435;1.42e-13;4!UBERON:0000204;1.42e-13;4!UBERON:0000125;4.67e-12;9!UBERON:0002308;4.67e-12;9!UBERON:0002791;7.69e-12;32!UBERON:0001869;1.98e-11;32!UBERON:0005383;1.27e-10;3!UBERON:0005382;1.27e-10;3!UBERON:0002780;2.61e-10;41!UBERON:0001890;2.61e-10;41!UBERON:0001893;1.09e-09;34!UBERON:0003528;1.10e-09;34!UBERON:0002020;1.10e-09;34!UBERON:0001873;1.28e-07;2!UBERON:0000073;3.90e-07;53!UBERON:0002616;3.90e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,5.47e-16,9;UBERON:0007245,5.47e-16,9;UBERON:0010009,5.47e-16,9;UBERON:0010011,5.47e-16,9;UBERON:0000454,5.47e-16,9;UBERON:0009663,7.94e-16,7;UBERON:0000369,1.44e-13,4;UBERON:0002435,1.44e-13,4;UBERON:0000204,1.44e-13,4;UBERON:0010082,1.44e-13,4;UBERON:0000125,4.01e-12,9;UBERON:0002308,4.01e-12,9;UBERON:0002791,4.49e-12,32;UBERON:0001869,4.49e-12,32;UBERON:0002780,4.65e-12,41;UBERON:0001890,4.65e-12,41;UBERON:0003080,4.65e-12,41;UBERON:0006240,4.65e-12,41;UBERON:0003528,3.30e-11,34;UBERON:0002020,3.30e-11,34;UBERON:0001893,3.30e-11,34;UBERON:0005383,1.31e-10,3;UBERON:0005382,1.31e-10,3;UBERON:0000025,3.68e-10,192;UBERON:0000073,5.91e-10,53;UBERON:0002616,5.91e-10,53;UBERON:0003056,2.62e-09,61;UBERON:0001049,3.13e-09,56;UBERON:0005068,3.13e-09,56;UBERON:0006241,3.13e-09,56;UBERON:0007135,3.13e-09,56;UBERON:0003075,7.41e-09,82;UBERON:0007284,7.41e-09,82;UBERON:0004111,2.86e-08,240;UBERON:0002346,3.12e-08,86;UBERON:0001873,1.31e-07,2;UBERON:0010122,1.31e-07,2;UBERON:0001017,6.16e-07,81;UBERON:0000955,7.78e-07,68;UBERON:0006238,7.78e-07,68;UBERON:0010371,8.09e-07,104;UBERON:0001875,9.50e-07,2;UBERON:0006514,9.50e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,2.09340350391728,0.218441372130172,0,0,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.382067028739756,0.492603536699674,0.472264687882075,0.393364276848904,0,0.309632246632152,0.919421224478927,1.8072355126695,1.10926203050036,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,0,1.05353633910031,0.983548850569165,1.17903228824749,0.616804496998528,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0.593146252648242,0.535081656179426,0,0.339928028092699,0.766440987203842,1.03088233644789,0.506039384039006,0,1.95325036156926,1.90090408889675,0.602300476311091,0.639933055772092,0,0.710331756132051,0,0.201606743224732,0.802320587350522,0.724122019413995,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0.472674085820339,0,0.263504357079378,0.589405839739707,0.728590576585084,1.48313777113772,0,0,0,0.476981248610684,0.571994910780128,0,0,0.860234595106124,1.38856200643038,1.13061588384802,0.419499436209906,0,1.25396979922086,0.258416759169329,1.42306505074684,0.33472061276467,0.805658634218294,1.52054421143703,0.976248230192678,0.367663080345869,0,0.357198913136319,0.44905874525234,0.675668882899933,0,0.949265659568129,0.732806975721629,0,0,1.74437620857014,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0.311211035399766,0.404132016209064,0,0.151357427644931,0,0,1.24864030732128,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0.397589304964456,0.580969714347592,0.414644220061482,1.26160425437814,1.09493207722749,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,1.4763109092493,0,0,0,0,0,0,0,0.737930631258681,0,0.439001141634502,0,0.201057944823262,0.0925884451585296,0,1.03993478527958,0,0,0.117408694235822,0.288732895522148,0.925971025153221,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0.335964256397719,0,0.268675568108545,0,0.766765358330422,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,1.74306691720059,0.299918973546171,0,0,0,0,0,0,0,0,0,0.336255431980582,0.788123040807709,0.862510299438069,0.513372145118994,0,0,0,0.335032530668698,1.91381625495949,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0.368738337083406,0.173767228936166,0.587403472388222,0,0,0.431428401637234,0.853820462427555,0.303127571446259,0,0,0.496215615637554,0,0.561320188866147,0.128139149255701,1.53512174720011,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0,1.54227252690289,0.541892875087706,0,0,1.66215201785745,1.11937377361089,0,0,0.512900250232778,0.984043937099117,0,0.412164046590889,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0,0.170453254832202,0,0,0,0.510450849978337,0.30347334256665,0,0,1.3940745403212,0,0.532306030317022,0,0,0.858749320451947,0.372158369359667,0,0.571890581771475,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,3.17020642346017,0.842516912477962,0,0.243713489631284,0,0.136499911407986,0,1.13008116620243,1.10273068709225,0.66343897524122,1.31535265576129,0,0.655894752046633,0,0,0,0,0.294747123039363,0.35667105148125,0.354761064070598,0.633322905892992,0,0.379473173765715,0,1.05844323998063,1.34060455107157,1.08890984861323,0.659006605437454,0.86101074534246,0,1.7737206141467,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0.735120647943095,0.557409525377156,0.577076851905779,0,0.159426272728822,0.199579371432817,0.383010740264733,1.05836791361941,0,1.68478306868075,0.912938716132769,0.156679895773023,2.50634477090067,0.338583555603207,0,0.403599414382095,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0.748562161632879,0,0.121360521749513,0.111443384277478,0,0.47748896947538,0.890894042497916,0.307160702099232,0,1.1253553312841,0,0,0.422250816255987,0.19924798825107,0.552567831062295,0,0.102268682502155,0.246169610922139,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.834912883456661,0,0,0,0,1.82069517256799,1.27126825146383,0.709163045303809,0,0,0.173624994933292,3.54296554325536,4.34147179051469,0,0.221158519862449,1.47773809476774,1.09692698576986,0.32681539055697,0.557694977114413,0.153900517007594,0,0.23056390438806,0.269272933229316,0.325942115766024,0.31900115973192,0.1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| |||
|short_description=p3@BCR | |||
}} |
Revision as of 14:50, 21 January 2014
Short description: | p3@BCR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BCR_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_ENST00000290956, ENST00000292697, ENST00000420248_5end |
EntrezGene: | BCR |
HGNC: | 1014 |
UniProt: | A9UF01E9PGJ4A9UF04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.41e-10 | 9 |
epithelial cell of lower respiratory tract | 1.41e-10 | 9 |
duct epithelial cell | 1.26e-08 | 3 |
branched duct epithelial cell | 1.26e-08 | 3 |
tracheal epithelial cell | 1.26e-08 | 3 |
tracheoblast | 1.26e-08 | 3 |
respiratory epithelial cell | 4.11e-07 | 13 |