FFCP PHASE1:Hg19::chr4:140657557..140657602,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C870 | |||
|description=CAGE_peak_at_chr4:140657557..140657602,- | |||
|id=chr4:140657557..140657602,- | |||
|ontology_enrichment_celltype=CL:0002057!3.17e-20!42;CL:0000860!1.00e-18!45;CL:0002393!2.92e-18!9;CL:0002397!2.92e-18!9;CL:0002009!2.84e-14!65;CL:0000738!6.06e-13!140;CL:0000557!7.12e-13!71;CL:0002194!1.72e-12!63;CL:0000576!1.72e-12!63;CL:0000040!1.72e-12!63;CL:0000559!1.72e-12!63;CL:0002087!2.64e-12!119;CL:0000766!6.56e-12!76;CL:0000037!4.06e-11!172;CL:0000566!4.06e-11!172;CL:0000839!4.88e-11!70;CL:0000988!2.73e-10!182;CL:0002031!3.51e-10!124;CL:0000842!1.11e-09!3;CL:0000763!1.21e-08!112;CL:0000049!1.21e-08!112;CL:0002032!5.45e-08!165;CL:0000837!5.45e-08!165;CL:0001024!9.10e-08!1;CL:0000224!1.81e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002393;5.13e-23;6!CL:0002397;5.13e-23;6!CL:0000226;2.74e-12;3!CL:0000767;2.74e-12;3!CL:0000842;2.74e-12;3!CL:0000576;3.23e-09;48!CL:0000766;4.25e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,9.04e-16,9;CL:0002397,9.04e-16,9;CL:0000860,3.53e-13,42;CL:0002057,3.53e-13,42;CL:0000767,2.59e-12,3;CL:0000226,2.89e-12,3;CL:0000842,2.89e-12,3;CL:0000766,8.79e-12,72;CL:0000473,1.32e-11,48;CL:0000234,1.32e-11,48;CL:0002194,2.15e-09,59;CL:0000576,2.15e-09,59;CL:0000040,2.15e-09,59;CL:0000559,2.15e-09,59;CL:0002009,4.15e-09,61;CL:0000738,4.36e-09,136;CL:0000839,1.82e-08,66;CL:0000557,2.38e-08,67;CL:0000763,5.03e-08,108;CL:0000049,5.03e-08,108;CL:0002087,1.48e-07,115;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.02e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.60e-15!102;UBERON:0003061!6.60e-15!102;UBERON:0002193!2.78e-13!112;UBERON:0002371!4.50e-13!80;UBERON:0001474!5.55e-12!86;UBERON:0004765!8.11e-10!101;UBERON:0001434!8.11e-10!101;UBERON:0002405!2.63e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.62e-09,98;UBERON:0003061,8.62e-09,98;UBERON:0002193,5.11e-08,108;UBERON:0002371,1.98e-07,76;UBERON:0001474,6.33e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0.293600439334847,1.66198622559563,0.401088894940283,9.11445657006578,0,0,0,0,0,0,0,0,0,0,0,0,1.03423704220986,0,0,0,0,0,2.14258724659632,0.962787081228281,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:140657557..140657602,- | |||
}} |
Revision as of 03:12, 22 January 2014
Short description: | p@chr4:140657557..140657602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:140657557..140657602, - |
Coexpression cluster: | C870_CD14_Mast_Basophils_Peripheral_Eosinophils_Endothelial_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 9.04e-16 | 9 |
CD14-positive, CD16-positive monocyte | 9.04e-16 | 9 |
classical monocyte | 3.53e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-13 | 42 |
basophil | 2.59e-12 | 3 |
single nucleate cell | 2.89e-12 | 3 |
mononuclear cell | 2.89e-12 | 3 |
myeloid leukocyte | 8.79e-12 | 72 |
defensive cell | 1.32e-11 | 48 |
phagocyte | 1.32e-11 | 48 |
monopoietic cell | 2.15e-09 | 59 |
monocyte | 2.15e-09 | 59 |
monoblast | 2.15e-09 | 59 |
promonocyte | 2.15e-09 | 59 |
macrophage dendritic cell progenitor | 4.15e-09 | 61 |
leukocyte | 4.36e-09 | 136 |
myeloid lineage restricted progenitor cell | 1.82e-08 | 66 |
granulocyte monocyte progenitor cell | 2.38e-08 | 67 |
myeloid cell | 5.03e-08 | 108 |
common myeloid progenitor | 5.03e-08 | 108 |
nongranular leukocyte | 1.48e-07 | 115 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.62e-09 | 98 |
blood island | 8.62e-09 | 98 |
hemolymphoid system | 5.11e-08 | 108 |
bone marrow | 1.98e-07 | 76 |
bone element | 6.33e-07 | 82 |