FFCP PHASE1:Hg19::chr5:125815780..125815801,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000512579_5end | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_17_at_GRAMD3_5end | |||
|id=chr5:125815780..125815801,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;5.15e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,8.56e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.90e-79!115;UBERON:0001049!3.42e-52!57;UBERON:0005068!3.42e-52!57;UBERON:0006241!3.42e-52!57;UBERON:0007135!3.42e-52!57;UBERON:0002616!4.42e-42!59;UBERON:0003075!5.57e-40!86;UBERON:0007284!5.57e-40!86;UBERON:0003080!1.12e-39!42;UBERON:0001017!4.42e-38!82;UBERON:0002780!6.64e-38!41;UBERON:0001890!6.64e-38!41;UBERON:0006240!6.64e-38!41;UBERON:0005743!1.22e-37!86;UBERON:0002346!1.26e-37!90;UBERON:0002020!1.52e-37!34;UBERON:0003528!1.52e-37!34;UBERON:0001893!4.98e-37!34;UBERON:0000955!4.87e-36!69;UBERON:0006238!4.87e-36!69;UBERON:0002791!1.88e-35!33;UBERON:0001869!1.76e-33!32;UBERON:0000073!6.40e-33!94;UBERON:0001016!6.40e-33!94;UBERON:0003056!1.71e-26!61;UBERON:0002619!3.10e-24!22;UBERON:0000956!7.22e-21!25;UBERON:0000203!7.22e-21!25;UBERON:0002420!1.39e-20!9;UBERON:0007245!1.39e-20!9;UBERON:0010009!1.39e-20!9;UBERON:0010011!1.39e-20!9;UBERON:0000454!1.39e-20!9;UBERON:0001950!2.58e-20!20;UBERON:0002308!3.63e-20!9;UBERON:0000125!3.63e-20!9;UBERON:0000033!7.78e-19!123;UBERON:0000153!1.84e-18!129;UBERON:0007811!1.84e-18!129;UBERON:0009663!2.75e-16!7;UBERON:0004121!1.10e-15!169;UBERON:0000924!4.85e-15!173;UBERON:0006601!4.85e-15!173;UBERON:0000025!6.57e-14!194;UBERON:0002298!2.08e-13!8;UBERON:0003076!3.25e-13!15;UBERON:0003057!3.25e-13!15;UBERON:0000349!3.46e-12!5;UBERON:0004111!1.99e-11!241;UBERON:0000064!3.69e-10!219;UBERON:0001871!5.60e-10!7;UBERON:0000369!8.52e-10!4;UBERON:0002435!8.52e-10!4;UBERON:0000204!8.52e-10!4;UBERON:0010082!8.52e-10!4;UBERON:0000477!9.52e-10!286;UBERON:0000483!4.07e-09!309;UBERON:0000200!5.38e-09!6;UBERON:0000062!6.32e-09!511;UBERON:0000119!6.77e-09!312;UBERON:0004733!1.55e-08!12;UBERON:0002028!1.55e-08!12;UBERON:0007277!1.55e-08!12;UBERON:0000475!3.97e-08!365;UBERON:0005383!5.30e-08!3;UBERON:0005382!5.30e-08!3;UBERON:0002771!6.96e-08!3;UBERON:0004732!8.74e-08!13;UBERON:0006331!1.12e-07!3;UBERON:0000988!2.81e-07!3;UBERON:0002240!3.71e-07!3;UBERON:0001872!3.96e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;2.01e-30;9!UBERON:0000125;2.01e-30;9!UBERON:0007245;2.01e-30;9!UBERON:0002308;2.01e-30;9!UBERON:0010009;2.01e-30;9!UBERON:0010011;2.01e-30;9!UBERON:0000454;2.01e-30;9!UBERON:0003528;1.14e-27;34!UBERON:0002020;1.14e-27;34!UBERON:0002791;1.37e-27;32!UBERON:0009663;3.17e-27;7!UBERON:0002780;3.60e-26;41!UBERON:0001890;3.60e-26;41!UBERON:0000073;3.50e-23;53!UBERON:0002616;3.50e-23;53!UBERON:0001893;9.49e-23;34!UBERON:0001869;1.02e-22;32!UBERON:0001954;1.12e-16;2!UBERON:0003022;1.12e-16;2!UBERON:0002421;1.12e-16;2!UBERON:0002600;1.12e-16;2!UBERON:0001875;2.10e-16;2!UBERON:0006514;2.10e-16;2!UBERON:0002619;4.62e-16;22!UBERON:0000349;7.40e-15;5!UBERON:0000956;4.07e-14;25!UBERON:0000203;4.07e-14;25!UBERON:0000955;6.17e-13;68!UBERON:0001017;2.85e-12;75!UBERON:0005383;3.00e-11;3!UBERON:0005382;3.00e-11;3!UBERON:0001016;3.15e-10;83!UBERON:0001950;2.63e-09;20!UBERON:0001874;6.98e-09;1!UBERON:0002038;6.98e-09;1!UBERON:0002426;6.98e-09;1!UBERON:0003831;6.98e-09;1!UBERON:0003898;6.98e-09;1!UBERON:0004830;6.98e-09;1!UBERON:0009661;6.98e-09;1!UBERON:0002950;6.98e-09;1!UBERON:0003830;6.98e-09;1!UBERON:0005175;6.98e-09;1!UBERON:0001774;6.98e-09;1!UBERON:0001103;6.98e-09;1!UBERON:0001891;6.98e-09;1!UBERON:0000369;1.18e-08;4!UBERON:0002435;1.18e-08;4!UBERON:0000204;1.18e-08;4!UBERON:0002784;1.76e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.42e-38,53;UBERON:0002616,1.42e-38,53;UBERON:0001049,2.21e-36,56;UBERON:0005068,2.21e-36,56;UBERON:0006241,2.21e-36,56;UBERON:0007135,2.21e-36,56;UBERON:0003528,1.92e-35,34;UBERON:0002020,1.92e-35,34;UBERON:0002780,1.37e-33,41;UBERON:0001890,1.37e-33,41;UBERON:0003080,1.37e-33,41;UBERON:0006240,1.37e-33,41;UBERON:0000955,1.03e-32,68;UBERON:0006238,1.03e-32,68;UBERON:0002791,5.80e-32,32;UBERON:0002420,1.06e-30,9;UBERON:0007245,1.06e-30,9;UBERON:0010009,1.06e-30,9;UBERON:0010011,1.06e-30,9;UBERON:0000454,1.06e-30,9;UBERON:0000125,1.11e-30,9;UBERON:0002308,1.11e-30,9;UBERON:0001893,5.10e-30,34;UBERON:0009663,1.69e-27,7;UBERON:0001017,4.40e-27,81;UBERON:0001869,7.29e-27,32;UBERON:0001016,4.10e-24,89;UBERON:0003075,5.10e-24,82;UBERON:0007284,5.10e-24,82;UBERON:0007023,1.36e-23,114;UBERON:0002346,9.02e-23,86;UBERON:0003056,6.10e-22,61;UBERON:0010371,2.49e-18,104;UBERON:0001954,9.26e-17,2;UBERON:0003022,9.26e-17,2;UBERON:0002421,9.26e-17,2;UBERON:0002600,9.26e-17,2;UBERON:0001875,1.17e-16,2;UBERON:0006514,1.17e-16,2;UBERON:0002619,4.58e-16,22;UBERON:0000349,6.29e-15,5;UBERON:0000956,4.03e-14,25;UBERON:0000203,4.03e-14,25;UBERON:0010314,8.30e-14,132;UBERON:0005383,2.64e-11,3;UBERON:0005382,2.64e-11,3;UBERON:0004121,3.47e-11,171;UBERON:0000924,3.47e-11,171;UBERON:0006601,3.47e-11,171;UBERON:0001950,2.73e-09,20;UBERON:0002426,5.31e-09,1;UBERON:0003831,5.31e-09,1;UBERON:0003898,5.31e-09,1;UBERON:0004830,5.31e-09,1;UBERON:0003830,5.31e-09,1;UBERON:0005175,5.31e-09,1;UBERON:0001774,5.31e-09,1;UBERON:0001103,5.31e-09,1;UBERON:0010084,5.31e-09,1;UBERON:0002038,6.22e-09,1;UBERON:0009661,6.22e-09,1;UBERON:0002950,6.22e-09,1;UBERON:0001891,6.22e-09,1;UBERON:0009616,6.22e-09,1;UBERON:0010286,6.22e-09,1;UBERON:0001874,6.72e-09,1;UBERON:0000369,1.07e-08,4;UBERON:0002435,1.07e-08,4;UBERON:0000204,1.07e-08,4;UBERON:0010082,1.07e-08,4;UBERON:0000025,1.57e-08,192;UBERON:0002784,2.30e-08,4;UBERON:0011216,8.61e-08,223 | |||
|phase1_expression=1.63510541343501,0.214100523890983,1.12763523276777,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0.994147647766298,4.50142132513641,0,0,0,0.597743964753209,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,1.39152147242777,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0.885741385813839,2.89431452700979,0,4.31259113731776,0.591095237907095,0.658156191461918,0,0,1.61595542857974,0,0,0,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.337005664903385,1.60515529459758,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0.823040347426423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,2.87501295673185,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,1.59045937961861,5.31193283835145,0,0,0,0,0,0.485996453264197,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,4.36367585750877,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.610131324509816,2.253436752717,0,2.99508439149501,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,3.51194489925733,0.41023272848151,0,0.414943514785307,0.484426936895553,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.270150338473579,0.781078098613847,2.68692835451539,0.443910671357348,0,0,0.496211178389294,0,0,0,1.00885116665647,0,0.91064876540519,0.266107110487916,0,0,0.475788130837822,0.131545547125698,0,0,0.78493092850514,1.41404030924402,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.588925401344836,0.891139200981258,0.4226557275834,0,0,0,0,0,0,0,0,0,1.43339583151451,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.21245917149183,0.803892390468535,0,1.34462894620464,0,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.733448665097199,0.406896178315738,0.665756774185513,0.402547587182052,0 | |||
|short_description=p17@GRAMD3 | |||
}} |
Revision as of 07:09, 22 January 2014
Short description: | p17@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_GRAMD3_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | 0bp_to_ENST00000512579_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 8.56e-11 | 3 |