FFCP PHASE1:Hg19::chr5:156534093..156534118,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84868 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18437 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=175bp_to_ENST00000521665_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_13_at_HAVCR2_5end | |||
|id=chr5:156534093..156534118,- | |||
|ontology_enrichment_celltype=CL:0002057!3.78e-94!42;CL:0000860!4.67e-87!45;CL:0002194!4.51e-77!63;CL:0000576!4.51e-77!63;CL:0000040!4.51e-77!63;CL:0000559!4.51e-77!63;CL:0002009!2.50e-74!65;CL:0000766!5.44e-71!76;CL:0000839!3.81e-68!70;CL:0000557!5.17e-67!71;CL:0000738!2.44e-56!140;CL:0002087!1.04e-54!119;CL:0000763!5.95e-48!112;CL:0000049!5.95e-48!112;CL:0002031!1.19e-47!124;CL:0000037!1.35e-44!172;CL:0000566!1.35e-44!172;CL:0000988!2.86e-41!182;CL:0002032!3.93e-40!165;CL:0000837!3.93e-40!165;CL:0000134!1.17e-14!358;CL:0002320!4.49e-14!365;CL:0002393!3.83e-13!9;CL:0002397!3.83e-13!9;CL:0000219!1.07e-12!390;CL:0000048!1.39e-09!430;CL:0000034!2.30e-09!444;CL:0000723!3.05e-09!436;CL:0000875!1.72e-08!3;CL:0002396!1.72e-08!3;CL:0000767!3.14e-08!3;CL:0000451!2.83e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-136;33!CL:0002057;1.48e-136;33!CL:0000473;1.76e-95;39!CL:0000234;1.76e-95;39!CL:0000576;1.63e-78;48!CL:0000766;1.12e-46;69!CL:0000763;5.40e-23;100!CL:0002087;1.64e-19;104!CL:0000875;9.36e-16;3!CL:0002396;9.36e-16;3!CL:0000738;6.73e-13;136!CL:0000988;1.12e-07;177!CL:0000767;1.13e-07;3!CL:0000219;8.39e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.68e-149,42;CL:0002057,2.68e-149,42;CL:0000473,7.45e-130,48;CL:0000234,7.45e-130,48;CL:0002194,1.27e-102,59;CL:0000576,1.27e-102,59;CL:0000040,1.27e-102,59;CL:0000559,1.27e-102,59;CL:0002009,4.14e-99,61;CL:0000766,3.10e-93,72;CL:0000839,3.06e-91,66;CL:0000557,8.35e-90,67;CL:0000763,2.61e-60,108;CL:0000049,2.61e-60,108;CL:0002087,3.50e-53,115;CL:0002031,1.03e-50,120;CL:0000738,1.59e-49,136;CL:0002032,7.25e-41,161;CL:0000837,7.25e-41,161;CL:0000037,6.72e-39,168;CL:0000988,1.35e-36,177;CL:0000875,9.62e-16,3;CL:0002396,9.62e-16,3;CL:0000134,5.81e-15,354;CL:0002320,1.54e-14,361;CL:0000219,4.79e-13,386;CL:0000048,3.23e-11,427;CL:0000723,5.78e-11,433;CL:0000034,1.22e-10,441;CL:0002393,3.42e-09,9;CL:0002397,3.42e-09,9;CL:0000767,1.59e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-109;42!CL:0000049;8.52e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.47e-58!80;UBERON:0002390!2.09e-56!102;UBERON:0003061!2.09e-56!102;UBERON:0001474!3.78e-53!86;UBERON:0002193!3.49e-52!112;UBERON:0004765!2.23e-43!101;UBERON:0001434!2.23e-43!101;UBERON:0002405!4.43e-40!115;UBERON:0002204!2.98e-21!167;UBERON:0003081!2.75e-20!216;UBERON:0002384!2.81e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.45e-78,76;UBERON:0001474,2.02e-72,82;UBERON:0004765,1.72e-65,90;UBERON:0002405,3.39e-63,93;UBERON:0002390,1.12e-59,98;UBERON:0003061,1.12e-59,98;UBERON:0001434,2.28e-58,100;UBERON:0002193,1.31e-53,108;UBERON:0002204,1.74e-32,167;UBERON:0003081,1.39e-25,203;UBERON:0000926,4.02e-14,315;UBERON:0004120,4.02e-14,315;UBERON:0006603,4.02e-14,315;UBERON:0002384,5.82e-14,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.15148819429164,0.619264493264304,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0,0,0,0,2.18097358169347,2.26725566213286,1.69808842831471,5.57829688573643,5.34518254428373,7.74265927237759,5.46615545412086,4.61089271752381,8.27687804610048,1.37898272294647,2.5819387343353,5.41705946377367,6.02375486536335,3.82068610080984,3.59557575112135,4.28517449319264,2.88836124368484,1.27867425159808,4.28806690242731,4.9865914405408,2.98357325372886,3.77272010217159,2.8369261234557,1.24564449799115,6.02996796616184,7.30076085788282,8.47036494349955,1.81619850790011,4.78760926783834,2.84816148696796,0.845021145247767,0,1.46761051855863,0.673971786878971,0.450530678524519,1.28580469357664,1.71007646244749,1.19350006319454,1.27864907635244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.348259474598534,0.398873881556595,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,2.30725423917463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@HAVCR2 | |||
}} |
Revision as of 08:39, 22 January 2014
Short description: | p13@HAVCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_HAVCR2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 175bp_to_ENST00000521665_5end |
EntrezGene: | HAVCR2 |
HGNC: | 18437 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.45e-78 | 76 |
bone element | 2.02e-72 | 82 |
skeletal element | 1.72e-65 | 90 |
immune system | 3.39e-63 | 93 |
hematopoietic system | 1.12e-59 | 98 |
blood island | 1.12e-59 | 98 |
skeletal system | 2.28e-58 | 100 |
hemolymphoid system | 1.31e-53 | 108 |
musculoskeletal system | 1.74e-32 | 167 |
lateral plate mesoderm | 1.39e-25 | 203 |
mesoderm | 4.02e-14 | 315 |
mesoderm-derived structure | 4.02e-14 | 315 |
presumptive mesoderm | 4.02e-14 | 315 |
connective tissue | 5.82e-14 | 371 |