FFCP PHASE1:Hg19::chr6:32997459..32997492,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C569 | |||
|description=CAGE_peak_at_chr6:32997459..32997492,+ | |||
|id=chr6:32997459..32997492,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.94e-79!140;CL:0002087!4.32e-73!119;CL:0002031!3.97e-67!124;CL:0000037!1.27e-61!172;CL:0000566!1.27e-61!172;CL:0002057!6.21e-60!42;CL:0000988!3.12e-58!182;CL:0000860!5.44e-55!45;CL:0002032!2.02e-54!165;CL:0000837!2.02e-54!165;CL:0002009!2.62e-52!65;CL:0002194!3.99e-49!63;CL:0000576!3.99e-49!63;CL:0000040!3.99e-49!63;CL:0000559!3.99e-49!63;CL:0000557!1.45e-46!71;CL:0000766!1.27e-44!76;CL:0000839!1.03e-42!70;CL:0000763!2.05e-32!112;CL:0000049!2.05e-32!112;CL:0000945!1.61e-23!24;CL:0000826!1.61e-23!24;CL:0000134!7.97e-20!358;CL:0000838!8.00e-20!52;CL:0000236!2.31e-19!14;CL:0000542!2.80e-19!53;CL:0000051!2.80e-19!53;CL:0002320!5.92e-19!365;CL:0000219!1.50e-16!390;CL:0002393!5.42e-15!9;CL:0002397!5.42e-15!9;CL:0000034!6.31e-13!444;CL:0000048!2.59e-12!430;CL:0000723!8.24e-12!436;CL:0000451!3.70e-09!10;CL:0000453!6.40e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-59;33!CL:0002057;1.49e-59;33!CL:0000473;5.80e-46;39!CL:0000234;5.80e-46;39!CL:0000576;1.01e-42;48!CL:0000766;7.97e-30;69!CL:0000236;7.46e-29;13!CL:0002393;4.05e-20;6!CL:0002397;4.05e-20;6!CL:0002087;7.06e-20;104!CL:0000738;3.47e-15;136!CL:0000945;1.63e-14;24!CL:0000763;1.92e-11;100!CL:0000767;7.19e-11;3!CL:0000226;1.65e-10;3!CL:0000842;1.65e-10;3!CL:0000988;3.47e-10;177!CL:0001014;6.06e-08;2!CL:0001016;6.06e-08;2!CL:0000451;2.01e-07;10!CL:0000219;2.34e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-83,42;CL:0002057,1.04e-83,42;CL:0000473,1.94e-76,48;CL:0000234,1.94e-76,48;CL:0000738,2.99e-70,136;CL:0002009,2.20e-68,61;CL:0002087,3.13e-63,115;CL:0002194,6.77e-63,59;CL:0000576,6.77e-63,59;CL:0000040,6.77e-63,59;CL:0000559,6.77e-63,59;CL:0000557,1.76e-61,67;CL:0000766,6.85e-60,72;CL:0002031,1.17e-57,120;CL:0000037,7.85e-57,168;CL:0000839,2.43e-55,66;CL:0000988,2.47e-53,177;CL:0002032,1.92e-48,161;CL:0000837,1.92e-48,161;CL:0000763,6.97e-44,108;CL:0000049,6.97e-44,108;CL:0000236,1.21e-26,14;CL:0000134,1.62e-20,354;CL:0002320,7.10e-20,361;CL:0000219,1.29e-17,386;CL:0002393,1.54e-17,9;CL:0002397,1.54e-17,9;CL:0000034,9.29e-16,441;CL:0000048,7.46e-15,427;CL:0000945,1.58e-14,24;CL:0000826,1.58e-14,24;CL:0000723,1.79e-14,433;CL:0000767,7.08e-11,3;CL:0000226,1.85e-10,3;CL:0000842,1.85e-10,3;CL:0001014,5.29e-08,2;CL:0001016,5.29e-08,2;CL:0000451,1.94e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;4.36e-60;42!CL:0000049;2.86e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.69e-48!102;UBERON:0003061!2.69e-48!102;UBERON:0002193!6.67e-44!112;UBERON:0002371!2.56e-43!80;UBERON:0001474!3.62e-39!86;UBERON:0004765!2.34e-32!101;UBERON:0001434!2.34e-32!101;UBERON:0002405!2.17e-31!115;UBERON:0002384!9.05e-18!375;UBERON:0003081!2.29e-15!216;UBERON:0002204!1.60e-13!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.40e-56,76;UBERON:0001474,2.07e-51,82;UBERON:0002390,4.04e-49,98;UBERON:0003061,4.04e-49,98;UBERON:0004765,5.17e-46,90;UBERON:0002405,3.17e-44,93;UBERON:0002193,1.19e-43,108;UBERON:0001434,1.80e-40,100;UBERON:0002204,2.07e-20,167;UBERON:0002384,5.32e-19,371;UBERON:0003081,1.72e-18,203;UBERON:0000926,4.41e-09,315;UBERON:0004120,4.41e-09,315;UBERON:0006603,4.41e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.916960868975415,0.903106483949403,0.708397031823113,8.26064981382698,2.68680578668049,3.71558695958582,0,0,0,0.154934401160603,0,1.76160263600908,17.1738576644882,7.2196001089251,9.98250005292918,0.223915474239924,0,0.77272670290256,0.436194716338694,0.377875943688809,0.727752183563449,3.48643555358527,1.6446715520873,1.54853185447552,8.91846416198666,9.99026755463492,7.56743135643473,4.13694816883942,6.45484683583826,0,2.44715041405386,0.272906150057846,1.57306439111559,4.59125838556354,6.73950956859797,5.11469700639233,5.93732340336089,4.9865914405408,2.98357325372886,6.09439401120026,0,2.4912889959823,3.76872997885115,7.82224377630302,4.99534342821768,1.81619850790011,2.57794345191295,3.79754864929061,1.90129757680748,1.70083439972035,4.61249020118427,2.02191536063691,1.05123824989054,2.08943262706204,1.42506371870624,0.39783335439818,0.182664153764634,1.75996244461323,2.18455444504853,5.33705552318133,8.10787422876364,1.60158394814405,7.47178171940828,3.96626923670917,2.86216126360609,13.6611112586268,4.69789751496751,1.14681968437569,3.96513985737078,2.80254281490768,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66943437013739,0.571994910780128,5.20040501861391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.591092280605782,0,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,3.45142721309787,5.54983300577911,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11443384277478,0,0,0.593929361665277,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.269604531922708,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,2.92466059016951,16.2498410457169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.398594520940089,3.27130788511688,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0.345701962667338,0,0.271878931907327,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.281951753939561,0,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,1.33151354837103,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr6:32997459..32997492,+ | |||
}} |
Revision as of 11:20, 22 January 2014
Short description: | p@chr6:32997459..32997492, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:32997459..32997492, + |
Coexpression cluster: | C569_CD14_immature_CD19_Basophils_migratory_Dendritic_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.40e-56 | 76 |
bone element | 2.07e-51 | 82 |
hematopoietic system | 4.04e-49 | 98 |
blood island | 4.04e-49 | 98 |
skeletal element | 5.17e-46 | 90 |
immune system | 3.17e-44 | 93 |
hemolymphoid system | 1.19e-43 | 108 |
skeletal system | 1.80e-40 | 100 |
musculoskeletal system | 2.07e-20 | 167 |
connective tissue | 5.32e-19 | 371 |
lateral plate mesoderm | 1.72e-18 | 203 |
mesoderm | 4.41e-09 | 315 |
mesoderm-derived structure | 4.41e-09 | 315 |
presumptive mesoderm | 4.41e-09 | 315 |