FFCP PHASE1:Hg19::chr6:138428549..138428563,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17637 | |||
|TSSclassifier=strong | |||
|UniProt=F8W7F1 | |||
|association_with_transcript=0bp_to_ENST00000265603_5end | |||
|coexpression_cluster_id=C748 | |||
|description=CAGE_peak_1_at_PERP_5end | |||
|id=chr6:138428549..138428563,- | |||
|ontology_enrichment_celltype=CL:0000066!1.11e-43!254;CL:0000223!6.34e-20!59;CL:0002076!5.30e-18!43;CL:0000220!1.57e-15!246;CL:0002321!2.89e-15!248;CL:0002251!1.64e-10!21;CL:0000076!2.91e-09!62;CL:0002368!1.97e-07!13;CL:0002077!2.22e-07!33;CL:0002159!6.25e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.73e-13;42!CL:0002251;2.58e-10;20!CL:0002368;1.86e-07;13!CL:0002159;3.33e-07;14!CL:0002077;6.45e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.29e-44,253;CL:0000223,1.02e-19,58;CL:0002076,8.28e-18,42;CL:0002321,2.40e-15,250;CL:0002251,2.58e-10,20;CL:0000076,1.43e-09,63;CL:0002077,1.19e-07,34;CL:0002368,1.88e-07,13;CL:0002159,3.51e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;1.12e-10;58!UBERON:0008947;1.30e-07;29 | |||
|ontology_enrichment_disease=DOID:305!1.42e-17!106;DOID:0050687!1.13e-13!143;DOID:299!9.73e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;8.11e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.44e-17,106;DOID:0050687,1.45e-13,143;DOID:299,8.34e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.43e-30!169;UBERON:0000925!1.43e-30!169;UBERON:0006595!1.43e-30!169;UBERON:0001007!6.65e-25!155;UBERON:0001555!6.65e-25!155;UBERON:0007026!6.65e-25!155;UBERON:0000077!1.17e-22!130;UBERON:0004921!2.46e-22!129;UBERON:0004185!2.46e-22!129;UBERON:0003104!1.27e-18!238;UBERON:0009142!1.27e-18!238;UBERON:0001004!5.96e-18!72;UBERON:0001041!8.89e-18!98;UBERON:0000466!4.94e-15!126;UBERON:0002100!1.32e-13!216;UBERON:0000464!1.48e-13!104;UBERON:0000481!5.05e-13!347;UBERON:0000065!6.12e-13!53;UBERON:0000468!1.61e-12!659;UBERON:0000475!6.83e-12!365;UBERON:0001048!7.51e-12!168;UBERON:0005911!1.08e-11!82;UBERON:0000161!2.55e-11!35;UBERON:0000915!1.03e-10!52;UBERON:0000072!1.08e-10!46;UBERON:0008947!1.14e-10!38;UBERON:0003258!1.14e-10!38;UBERON:0009569!3.41e-10!113;UBERON:0000467!4.47e-10!625;UBERON:0000480!5.97e-10!626;UBERON:0003102!1.63e-09!95;UBERON:0005153!3.76e-09!37;UBERON:0005177!1.32e-08!107;UBERON:0005156!1.78e-08!59;UBERON:0000990!1.78e-08!59;UBERON:0003100!2.38e-08!41;UBERON:0000166!2.65e-08!21;UBERON:0005178!4.43e-08!34;UBERON:0002224!4.43e-08!34;UBERON:0000063!4.57e-08!97;UBERON:0000922!1.07e-07!612;UBERON:0000062!1.27e-07!511;UBERON:0005181!1.33e-07!35;UBERON:0000064!2.65e-07!219;UBERON:0002050!3.55e-07!605;UBERON:0005423!3.55e-07!605;UBERON:0005157!4.45e-07!51;UBERON:0000165!4.70e-07!28;UBERON:0000930!4.70e-07!28;UBERON:0002553!4.85e-07!70;UBERON:0005795!6.25e-07!22;UBERON:0000923!6.42e-07!604;UBERON:0005291!6.42e-07!604;UBERON:0006598!6.42e-07!604;UBERON:0002532!6.42e-07!604;UBERON:0000926!7.64e-07!448;UBERON:0004120!7.64e-07!448;UBERON:0006603!7.64e-07!448;UBERON:0003134!8.72e-07!37;UBERON:0000474!8.72e-07!37;UBERON:0005631!9.39e-07!14;UBERON:0000158!9.39e-07!14;UBERON:0003975!9.63e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;2.59e-09;44!UBERON:0000072;2.53e-08;37!UBERON:0001004;2.56e-08;65!UBERON:0000161;3.29e-07;19!UBERON:0000166;3.29e-07;19!UBERON:0000165;4.34e-07;28!UBERON:0000915;7.58e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.30e-26,160;UBERON:0000925,1.30e-26,160;UBERON:0006595,1.30e-26,160;UBERON:0001007,2.06e-21,145;UBERON:0001555,2.06e-21,145;UBERON:0007026,2.06e-21,145;UBERON:0004921,3.99e-19,118;UBERON:0001004,3.00e-17,74;UBERON:0001041,9.42e-15,87;UBERON:0002100,2.41e-13,199;UBERON:0000065,1.49e-12,54;UBERON:0005911,1.21e-11,82;UBERON:0003102,5.23e-11,99;UBERON:0000161,5.78e-11,36;UBERON:0008947,1.39e-10,38;UBERON:0003258,1.39e-10,38;UBERON:0000072,2.54e-10,47;UBERON:0000915,4.03e-10,52;UBERON:0009569,6.77e-10,112;UBERON:0001048,7.37e-10,160;UBERON:0005153,4.55e-09,37;UBERON:0005177,1.05e-08,101;UBERON:0005157,1.61e-08,47;UBERON:0005156,1.68e-08,59;UBERON:0000990,1.68e-08,59;UBERON:0003100,2.25e-08,41;UBERON:0000166,6.85e-08,22;UBERON:0005178,1.84e-07,34;UBERON:0002224,1.84e-07,34;UBERON:0000153,2.97e-07,62;UBERON:0007811,2.97e-07,62;UBERON:0000033,4.73e-07,56;UBERON:0005181,5.15e-07,35;UBERON:0005795,5.98e-07,22;UBERON:0001008,6.22e-07,48;UBERON:0003134,8.35e-07,37;UBERON:0000474,8.35e-07,37;UBERON:0000165,8.84e-07,29;UBERON:0000930,8.84e-07,29;UBERON:0005631,8.99e-07,14;UBERON:0000158,8.99e-07,14;UBERON:0003975,9.23e-07,22 | |||
|phase1_expression=37.7891028882758,43.6765068737606,51.3074030909335,41.0300523247835,46.9309149148652,26.1701557230111,10.1319951267324,24.0053551902196,2.87304191019822,122.12976644125,84.4339413246637,266.49847399881,213.915019343276,44.5558870656168,82.1865491805231,47.0627602516243,55.4478965782059,44.5489155136298,60.0157342512324,9.11095829768231,27.9480947004627,1.88072832886853,2.57612388417951,5.06435372769671,2.88748071068046,1.75750833220288,2.21671591514854,2.20390187678302,5.90046415273356,3.0706351847777,24.7705797305722,423.853184484785,358.133837427339,490.663571491327,0,0,0.293600439334847,1.10799081706375,3.20871115952227,1.73608696572681,0,0,0,0.145398238779565,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0,1.5369642391746,0.709446689665756,2.75796544589295,0,2.70852973188684,0.376484679085209,1.36453075028923,0.898893937780338,1.53041946185451,0.320929027076094,1.27867425159808,0,0.598390972864896,0.852449501065388,0.580418477257168,2.26954089876456,1.86846674698672,1.00499466102697,1.0429658368404,0.65156653411535,27.2429776185016,1.10483290796269,1.58231193720442,0.211255286311942,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,1.77901850772711,0.426730222566507,0.800791974072025,1.14950487990897,0.661044872784862,0.954053754535364,0,1.76171156811282,0.382273228125229,0,1.68152568894461,0,3.73748563216283,4.71612915298998,4.31763147898969,2.84217042164153,1.62961133316795,3.78758244587787,1.94826728407911,3.11949279278486,2.65145316727353,2.87994062958707,0.812411591295047,7.55738786381483,10.5348071523501,0.328875809207352,0.552700035571697,0.289803085735052,0,0,0,0.793165398882963,1.91610246800961,1.71813722741315,0.759059076058509,0,0,0.950452044448374,0.301150238155546,0,0,0.710331756132051,0,6.45141578319144,8.02320587350522,3.04131248153878,0,3.35350429851818,3.32442660793179,50.9629204862238,22.560205978615,90.384227831554,3.9764297352555,8.27279279514481,18.7178937984854,44.7893382874379,38.6473057049755,15.3245518332324,1443.70222750334,2330.00943845735,0,0,0.132957960518865,0,0,0,17.6898542556368,26.6672724482899,28.8126616334303,30.5266288638965,54.5349267072878,24.7606237746061,19.4365318879234,32.3020948961661,46.2496141492723,23.0957222807622,41.8942489793513,38.0136052859256,29.7755710208767,25.3687525438649,30.7853940195069,6.51888016473782,5.61323431565425,4.95490514126618,19.9311628705648,21.833110170067,20.701797064136,2.63560834872127,7.75560528296651,2152.56024137555,25.8425414881566,14.6891393530913,36.5449339044484,29.5441719371278,28.3734705758686,35.8833664091077,14.9448594021587,37.7401349078255,2.8008993185979,5.92726957106628,5.06731899651722,49.3425214122476,50.7034813542399,7.73260725051529,30.2795274525411,26.8121756125891,17.4854956245607,4.46251094846307,8.90301194024723,7.86524517532592,35.5228257983514,14.4944494427886,30.4811054468508,7.12801714369232,8.40707559547093,13.6524204290704,10.7792721272436,15.4869224837741,8.00758527180571,42.39080966908,10.9744405220209,9.19463387397059,7.96261712204963,9.1880068359617,21.7061459183523,21.5692962706753,11.8681864649355,81.0245959427886,23.1868190786488,9.53269998168828,17.8672182078326,27.3417658230851,7.0154643716063,10.6022185182528,18.2258799311753,20.6906952728079,28.7557769938458,19.3444028597069,34.2512396467185,2101.13199559136,1247.81350170307,1095.30674979061,8.0502646045533,8.74696470921803,21.7282673165999,33.2751986599339,31.2877855085779,14.964071722109,4.69348596989448,31.5188059714514,15.1948413487729,33.4344908183025,74.3535866119673,173.082848458292,183.757312185131,161.718401051816,168.63948430783,176.264470270757,158.971314804435,191.325626279273,185.429284543452,175.444703567554,11.0723318193697,8.41450642820675,5.7620361586396,1.47008711385542,168.584196313035,140.544291984901,140.017207883493,0,129.875791101528,67.9408528782161,2881.05474226183,588.985187069926,855.501555222978,724.319406475177,10.4258657699304,29.1181739878282,60.6191636506148,26.7799235492427,98.740711852326,14.5810112238685,23.6122611414071,21.308465050275,421.969148510253,470.45041682799,0,0.234004265139238,0.148631162288728,1707.83045523908,1406.17839515265,1019.93004956173,894.152290665237,901.54647727031,455.458622848271,7.38994856843915,0.968532774145487,13.0616712790686,14.5561152951131,6.69084897159814,15.1759967358284,34.378958300245,5.86087236050235,71.8504273295362,14.7043314565753,28.8329335530161,11.1472308725925,50.7953812084484,99.8348557628211,46.1297817813776,27.5348754564067,10.7296933755565,9.298330278116,13.2969058292435,24.9617848587279,5.65856223376713,15.6034045225606,10.1240428026118,8.86463560680515,5.96883765930587,8.23240336780769,8.79487697593085,12.7941101547316,11.087326221068,89.5274949866971,74.080343981025,98.2734503319621,0,0,0,66.3760849711684,124.050890700843,9.98458335285029,103.663415573987,14.3833425785268,28.1125712286636,3.13838403181876,4.53170748464433,3.66566877261179,3.33691894327346,8.89331184778622,1.30139853857622,0.773288812777695,1.17261385734044,1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| |||
|short_description=p1@PERP | |||
}} |
Revision as of 14:13, 22 January 2014
Short description: | p1@PERP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PERP_5end |
Coexpression cluster: | C748_amniotic_keratoacanthoma_salivary_Keratinocyte_maxillary_Corneal_esophagus |
Association with transcript: | 0bp_to_ENST00000265603_5end |
EntrezGene: | PERP |
HGNC: | 17637 |
UniProt: | F8W7F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.29e-44 | 253 |
endodermal cell | 1.02e-19 | 58 |
endo-epithelial cell | 8.28e-18 | 42 |
embryonic cell | 2.40e-15 | 250 |
epithelial cell of alimentary canal | 2.58e-10 | 20 |
squamous epithelial cell | 1.43e-09 | 63 |
ecto-epithelial cell | 1.19e-07 | 34 |
respiratory epithelial cell | 1.88e-07 | 13 |
general ecto-epithelial cell | 3.51e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.44e-17 | 106 |
cell type cancer | 1.45e-13 | 143 |
adenocarcinoma | 8.34e-07 | 25 |