FFCP PHASE1:Hg19::chr7:100946049..100946091,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr7:100946049..100946091,+ | |||
|id=chr7:100946049..100946091,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.18e-14!5;CL:0000039!2.08e-10!7;CL:0000586!2.08e-10!7;CL:0000594!5.14e-08!3;CL:0002321!5.73e-08!248;CL:0002681!6.52e-07!13;CL:0002584!6.52e-07!13;CL:0000220!7.78e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.98e-50;5!CL:0000039;4.57e-36;7!CL:0000586;4.57e-36;7!CL:0002321;1.07e-16;15!CL:0000540;6.76e-16;6!CL:0000404;6.76e-16;6!CL:0000239;6.58e-14;3!CL:1000615;6.58e-14;3!CL:0002306;6.58e-14;3!CL:0000148;1.32e-09;10!CL:0000075;4.55e-09;27!CL:0002681;7.50e-08;12!CL:0002584;7.50e-08;12!CL:0000147;5.34e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.99e-50,5;CL:0000039,4.10e-36,7;CL:0000586,4.10e-36,7;CL:0000540,6.77e-16,6;CL:0000031,6.77e-16,6;CL:0000404,6.77e-16,6;CL:0000239,8.02e-14,3;CL:1000615,8.02e-14,3;CL:0002306,8.02e-14,3;CL:0000047,4.57e-12,8;CL:0000148,1.32e-09,10;CL:0000541,1.32e-09,10;CL:0000075,4.79e-09,27;CL:0002681,7.97e-08,12;CL:0002584,7.97e-08,12;CL:0000147,5.34e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.12e-16;10!UBERON:0005564;1.12e-16;10!CL:0000031;6.76e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;3.77e-16;22!DOID:2994;3.77e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.62e-16,22;DOID:2994,3.62e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.82e-12!8;UBERON:0003886!5.82e-10!63;UBERON:0002553!1.45e-09!70;UBERON:0000991!1.29e-08!21;UBERON:0009196!1.29e-08!21;UBERON:0009117!1.29e-08!21;UBERON:0005564!1.29e-08!21;UBERON:0003135!1.59e-08!11;UBERON:0004176!3.84e-08!22;UBERON:0002066!4.95e-08!5;UBERON:0000464!5.73e-08!104;UBERON:0001225!6.52e-07!13;UBERON:0008987!6.52e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.90e-21;8!UBERON:0003135;3.48e-15;11!UBERON:0006853;6.58e-14;3!UBERON:0007685;6.58e-14;3!UBERON:0004134;6.58e-14;3!UBERON:0000922;5.20e-10;49!UBERON:0000991;4.86e-08;21!UBERON:0001225;7.50e-08;12!UBERON:0008987;7.50e-08;12!UBERON:0003101;1.11e-07;22!UBERON:0000079;1.11e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.90e-21,8;UBERON:0003135,3.49e-15,11;UBERON:0006853,8.02e-14,3;UBERON:0007685,8.02e-14,3;UBERON:0004134,8.02e-14,3;UBERON:0000991,4.86e-08,21;UBERON:0009196,4.86e-08,21;UBERON:0009117,4.86e-08,21;UBERON:0005564,4.86e-08,21;UBERON:0001225,7.97e-08,12;UBERON:0008987,7.97e-08,12;UBERON:0004176,1.11e-07,22;UBERON:0003101,1.11e-07,22;UBERON:0000079,1.11e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.735326160691737,0,0,0.22452937262617,0.675668882899933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.352303495931295,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,217.11319691068,185.541675650079,148.031083215766,93.7095937338949,166.531761577915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,1.87467667973554,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,1.07946785661859,0,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0.451199612907412,0.770153371044148,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,1.01950509218015,0,1.11937377361089,0,0,0,0,0.650756789328606,0,0,0,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.145016693914229,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0.539617372749944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25660702173681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.4055263995963,284.981712629468,315.734656902181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.2979858716332,0,227.843045643587,261.338622349718,415.364945897499,190.03631478362,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:100946049..100946091,+ | |||
}} |
Revision as of 18:28, 22 January 2014
Short description: | p@chr7:100946049..100946091, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100946049..100946091, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.99e-50 | 5 |
germ line cell | 4.10e-36 | 7 |
germ cell | 4.10e-36 | 7 |
neuron | 6.77e-16 | 6 |
neuroblast | 6.77e-16 | 6 |
electrically signaling cell | 6.77e-16 | 6 |
brush border epithelial cell | 8.02e-14 | 3 |
kidney cortex tubule cell | 8.02e-14 | 3 |
epithelial cell of proximal tubule | 8.02e-14 | 3 |
neuronal stem cell | 4.57e-12 | 8 |
melanocyte | 1.32e-09 | 10 |
melanoblast | 1.32e-09 | 10 |
columnar/cuboidal epithelial cell | 4.79e-09 | 27 |
kidney cortical cell | 7.97e-08 | 12 |
renal cortical epithelial cell | 7.97e-08 | 12 |
pigment cell | 5.34e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 8.90e-21 | 8 |
male reproductive organ | 3.49e-15 | 11 |
renal cortex tubule | 8.02e-14 | 3 |
region of nephron tubule | 8.02e-14 | 3 |
proximal tubule | 8.02e-14 | 3 |
gonad | 4.86e-08 | 21 |
indifferent external genitalia | 4.86e-08 | 21 |
indifferent gonad | 4.86e-08 | 21 |
gonad primordium | 4.86e-08 | 21 |
cortex of kidney | 7.97e-08 | 12 |
renal parenchyma | 7.97e-08 | 12 |
external genitalia | 1.11e-07 | 22 |
male organism | 1.11e-07 | 22 |
male reproductive system | 1.11e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.62e-16 | 22 |
germ cell cancer | 3.62e-16 | 22 |