FFCP PHASE1:Hg19::chr8:90770008..90770092,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8767 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10020 | |||
|TSSclassifier=strong | |||
|UniProt=E5RGK6,E7ERW9 | |||
|association_with_transcript=0bp_to_ENST00000517696,ENST00000522965,ENST00000540020_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_RIPK2_5end | |||
|id=chr8:90770008..90770092,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.02e-33!76;CL:0000012!1.75e-31!682;CL:0000048!2.92e-31!430;CL:0000034!1.11e-30!444;CL:0000557!3.32e-30!71;CL:0000723!3.79e-30!436;CL:0000548!8.72e-30!679;CL:0000004!8.72e-30!679;CL:0000255!8.72e-30!679;CL:0000738!9.07e-29!140;CL:0000763!2.64e-28!112;CL:0000049!2.64e-28!112;CL:0002009!7.34e-28!65;CL:0000839!7.94e-27!70;CL:0002194!9.86e-27!63;CL:0000576!9.86e-27!63;CL:0000040!9.86e-27!63;CL:0000559!9.86e-27!63;CL:0000037!1.75e-26!172;CL:0000566!1.75e-26!172;CL:0002057!2.30e-26!42;CL:0000860!1.02e-25!45;CL:0000003!7.49e-25!722;CL:0002032!1.14e-24!165;CL:0000837!1.14e-24!165;CL:0000144!2.49e-24!625;CL:0000134!4.84e-23!358;CL:0002371!6.28e-23!591;CL:0000988!1.10e-22!182;CL:0000063!1.32e-22!578;CL:0002320!2.61e-22!365;CL:0002087!2.01e-21!119;CL:0002031!3.08e-21!124;CL:0000219!1.66e-16!390;CL:0000359!4.17e-09!32;CL:0000192!3.54e-07!42;CL:0000514!3.54e-07!42;CL:0002393!7.85e-07!9;CL:0002397!7.85e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.37e-19;33!CL:0002057;4.37e-19;33!CL:0000473;8.00e-18;39!CL:0000234;8.00e-18;39!CL:0000576;2.28e-16;48!CL:0000766;1.66e-15;69!CL:0000763;2.93e-09;100!CL:0000359;2.19e-08;32!CL:0002087;5.19e-07;104!CL:0000738;7.06e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.55e-34,72;CL:0000048,4.18e-31,427;CL:0000557,1.24e-30,67;CL:0000034,1.62e-30,441;CL:0000723,5.46e-30,433;CL:0000738,1.23e-28,136;CL:0000473,2.12e-28,48;CL:0000234,2.12e-28,48;CL:0002009,2.62e-28,61;CL:0000763,2.75e-28,108;CL:0000049,2.75e-28,108;CL:0002194,3.57e-27,59;CL:0000576,3.57e-27,59;CL:0000040,3.57e-27,59;CL:0000559,3.57e-27,59;CL:0000839,3.73e-27,66;CL:0000860,2.30e-26,42;CL:0002057,2.30e-26,42;CL:0000037,3.01e-26,168;CL:0002032,1.93e-24,161;CL:0000837,1.93e-24,161;CL:0000134,3.85e-23,354;CL:0000988,5.33e-23,177;CL:0002320,2.12e-22,361;CL:0002087,2.75e-21,115;CL:0002031,4.40e-21,120;CL:0000219,1.48e-16,386;CL:0000359,4.17e-09,32;CL:0000192,7.37e-07,43;CL:0000514,7.37e-07,43;CL:0002393,7.85e-07,9;CL:0002397,7.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.36e-19;42!CL:0000049;3.15e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.70e-28!80;UBERON:0001474!1.26e-24!86;UBERON:0002204!2.88e-24!167;UBERON:0002390!2.24e-23!102;UBERON:0003061!2.24e-23!102;UBERON:0002193!6.66e-23!112;UBERON:0004765!7.14e-23!101;UBERON:0001434!7.14e-23!101;UBERON:0002384!6.27e-22!375;UBERON:0003081!2.75e-20!216;UBERON:0002405!2.27e-17!115;UBERON:0000926!9.73e-10!448;UBERON:0004120!9.73e-10!448;UBERON:0006603!9.73e-10!448;UBERON:0001637!6.74e-07!42;UBERON:0003509!6.74e-07!42;UBERON:0004572!6.74e-07!42;UBERON:0004573!7.06e-07!33;UBERON:0004571!7.06e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.74e-28,76;UBERON:0001474,1.03e-24,82;UBERON:0002204,8.87e-24,167;UBERON:0002405,1.04e-23,93;UBERON:0004765,1.83e-23,90;UBERON:0002390,2.47e-23,98;UBERON:0003061,2.47e-23,98;UBERON:0002193,8.29e-23,108;UBERON:0001434,1.00e-22,100;UBERON:0002384,5.21e-22,371;UBERON:0003081,7.76e-19,203;UBERON:0000926,1.64e-15,315;UBERON:0004120,1.64e-15,315;UBERON:0006603,1.64e-15,315;UBERON:0001637,6.74e-07,42;UBERON:0003509,6.74e-07,42;UBERON:0004572,6.74e-07,42;UBERON:0004573,7.06e-07,33;UBERON:0004571,7.06e-07,33 | |||
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| |||
|short_description=p1@RIPK2 | |||
}} |
Revision as of 22:48, 22 January 2014
Short description: | p1@RIPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RIPK2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000517696, ENST00000522965, ENST00000540020_5end |
EntrezGene: | RIPK2 |
HGNC: | 10020 |
UniProt: | E5RGK6E7ERW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.74e-28 | 76 |
bone element | 1.03e-24 | 82 |
musculoskeletal system | 8.87e-24 | 167 |
immune system | 1.04e-23 | 93 |
skeletal element | 1.83e-23 | 90 |
hematopoietic system | 2.47e-23 | 98 |
blood island | 2.47e-23 | 98 |
hemolymphoid system | 8.29e-23 | 108 |
skeletal system | 1.00e-22 | 100 |
connective tissue | 5.21e-22 | 371 |
lateral plate mesoderm | 7.76e-19 | 203 |
mesoderm | 1.64e-15 | 315 |
mesoderm-derived structure | 1.64e-15 | 315 |
presumptive mesoderm | 1.64e-15 | 315 |
artery | 6.74e-07 | 42 |
arterial blood vessel | 6.74e-07 | 42 |
arterial system | 6.74e-07 | 42 |
systemic artery | 7.06e-07 | 33 |
systemic arterial system | 7.06e-07 | 33 |