FFCP PHASE1:Hg19::chr9:3525848..3525863,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5991 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9984 | |||
|TSSclassifier=strong | |||
|UniProt=E9PGD7,E9PGD6,F6UGA0,P48380,Q5JTM2 | |||
|association_with_transcript=119bp_to_ENST00000302303,ENST00000381985,ENST00000381986,ENST00000381992,ENST00000382004,NM_002919,NM_134428,uc003zhr.2,uc003zhs.1,uc010mhd.2,uc010mhe.1_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_6_at_RFX3_5end | |||
|id=chr9:3525848..3525863,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.80e-12;82!UBERON:0006215;1.29e-09;3!UBERON:0006241;1.38e-09;3!UBERON:0003057;1.38e-09;3!UBERON:0010122;1.86e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.20e-31!57;UBERON:0005068!5.20e-31!57;UBERON:0006241!5.20e-31!57;UBERON:0007135!5.20e-31!57;UBERON:0001017!1.39e-26!82;UBERON:0002780!2.50e-26!41;UBERON:0001890!2.50e-26!41;UBERON:0006240!2.50e-26!41;UBERON:0003080!3.16e-25!42;UBERON:0005743!1.43e-24!86;UBERON:0002616!3.61e-24!59;UBERON:0007023!8.53e-23!115;UBERON:0000955!1.87e-22!69;UBERON:0006238!1.87e-22!69;UBERON:0000073!3.13e-22!94;UBERON:0001016!3.13e-22!94;UBERON:0002020!2.59e-21!34;UBERON:0003528!2.59e-21!34;UBERON:0001893!6.60e-21!34;UBERON:0002791!1.22e-20!33;UBERON:0002346!1.38e-20!90;UBERON:0003075!1.57e-20!86;UBERON:0007284!1.57e-20!86;UBERON:0001869!9.95e-20!32;UBERON:0003056!4.47e-16!61;UBERON:0000956!1.37e-15!25;UBERON:0000203!1.37e-15!25;UBERON:0002619!2.11e-14!22;UBERON:0001950!7.52e-13!20;UBERON:0000153!1.13e-09!129;UBERON:0007811!1.13e-09!129;UBERON:0000924!1.99e-09!173;UBERON:0006601!1.99e-09!173;UBERON:0004121!3.59e-09!169;UBERON:0000033!1.37e-08!123;UBERON:0002308!3.33e-07!9;UBERON:0000125!3.33e-07!9;UBERON:0002420!4.05e-07!9;UBERON:0007245!4.05e-07!9;UBERON:0010009!4.05e-07!9;UBERON:0010011!4.05e-07!9;UBERON:0000454!4.05e-07!9;UBERON:0003076!4.47e-07!15;UBERON:0003057!4.47e-07!15;UBERON:0001894!6.20e-07!7;UBERON:0006222!6.20e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;8.10e-31;53!UBERON:0002616;8.10e-31;53!UBERON:0002780;1.61e-27;41!UBERON:0001890;1.61e-27;41!UBERON:0003528;1.08e-22;34!UBERON:0002020;1.08e-22;34!UBERON:0002619;4.18e-22;22!UBERON:0001017;1.33e-21;75!UBERON:0001893;2.54e-20;34!UBERON:0002791;4.65e-20;32!UBERON:0001894;5.18e-20;7!UBERON:0001869;5.82e-20;32!UBERON:0000955;1.31e-19;68!UBERON:0000956;3.88e-19;25!UBERON:0000203;3.88e-19;25!UBERON:0001950;1.11e-17;20!UBERON:0001016;1.11e-16;83!UBERON:0004733;1.11e-14;12!UBERON:0002028;1.11e-14;12!UBERON:0004732;1.95e-13;13!UBERON:0002784;2.11e-12;4!UBERON:0002298;2.47e-12;6!UBERON:0003296;3.61e-12;4!UBERON:0010133;3.61e-12;4!UBERON:0007023;2.41e-11;114!UBERON:0005383;3.95e-10;3!UBERON:0005382;3.95e-10;3!UBERON:0001896;6.45e-10;3!UBERON:0005290;6.45e-10;3!UBERON:0002240;1.38e-09;3!UBERON:0005174;1.38e-09;3!UBERON:0001137;1.38e-09;3!UBERON:0000125;3.39e-08;9!UBERON:0002308;3.39e-08;9!UBERON:0000200;4.18e-08;6!UBERON:0002680;6.23e-08;9!UBERON:0001895;6.23e-08;9!UBERON:0000369;1.12e-07;4!UBERON:0002435;1.12e-07;4!UBERON:0000204;1.12e-07;4!UBERON:0001873;1.86e-07;2!UBERON:0002771;3.47e-07;2!UBERON:0001905;3.47e-07;2!UBERON:0001954;3.47e-07;2!UBERON:0002757;3.47e-07;2!UBERON:0010134;3.47e-07;2!UBERON:0003022;3.47e-07;2!UBERON:0005408;3.47e-07;2!UBERON:0002421;3.47e-07;2!UBERON:0001899;3.47e-07;2!UBERON:0002600;3.47e-07;2!UBERON:0001871;6.12e-07;6!UBERON:0001897;7.07e-07;2!UBERON:0010225;7.07e-07;2!UBERON:0011216;9.00e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.66e-59,56;UBERON:0005068,1.66e-59,56;UBERON:0006241,1.66e-59,56;UBERON:0007135,1.66e-59,56;UBERON:0000073,2.30e-52,53;UBERON:0002616,2.30e-52,53;UBERON:0001017,3.82e-47,81;UBERON:0000955,3.49e-43,68;UBERON:0006238,3.49e-43,68;UBERON:0001016,1.88e-41,89;UBERON:0002346,8.39e-40,86;UBERON:0002780,2.09e-38,41;UBERON:0001890,2.09e-38,41;UBERON:0003080,2.09e-38,41;UBERON:0006240,2.09e-38,41;UBERON:0003075,1.16e-37,82;UBERON:0007284,1.16e-37,82;UBERON:0007023,5.87e-35,114;UBERON:0010371,1.15e-27,104;UBERON:0003528,2.91e-26,34;UBERON:0002020,2.91e-26,34;UBERON:0010314,4.84e-24,132;UBERON:0003056,1.04e-23,61;UBERON:0001893,1.44e-23,34;UBERON:0002619,2.12e-22,22;UBERON:0002791,2.62e-22,32;UBERON:0001869,2.62e-22,32;UBERON:0003076,3.99e-22,15;UBERON:0003057,3.99e-22,15;UBERON:0001894,4.00e-20,7;UBERON:0006222,4.00e-20,7;UBERON:0000956,2.15e-19,25;UBERON:0000203,2.15e-19,25;UBERON:0004121,4.68e-19,171;UBERON:0000924,4.68e-19,171;UBERON:0006601,4.68e-19,171;UBERON:0001950,5.75e-18,20;UBERON:0011216,6.93e-17,223;UBERON:0000025,2.01e-15,192;UBERON:0004733,6.92e-15,12;UBERON:0002028,6.92e-15,12;UBERON:0007277,6.92e-15,12;UBERON:0004732,1.26e-13,13;UBERON:0002298,1.46e-12,6;UBERON:0002784,2.26e-12,4;UBERON:0003296,4.15e-12,4;UBERON:0010133,4.15e-12,4;UBERON:0004111,2.63e-10,240;UBERON:0005383,3.27e-10,3;UBERON:0005382,3.27e-10,3;UBERON:0001896,4.41e-10,3;UBERON:0005290,4.41e-10,3;UBERON:0010096,4.41e-10,3;UBERON:0002240,9.82e-10,3;UBERON:0005174,9.82e-10,3;UBERON:0001137,9.82e-10,3;UBERON:0000125,2.66e-08,9;UBERON:0002308,2.66e-08,9;UBERON:0000200,3.65e-08,6;UBERON:0002680,5.15e-08,9;UBERON:0001895,5.15e-08,9;UBERON:0010092,5.15e-08,9;UBERON:0000369,9.76e-08,4;UBERON:0002435,9.76e-08,4;UBERON:0000204,9.76e-08,4;UBERON:0010082,9.76e-08,4;UBERON:0001873,2.02e-07,2;UBERON:0010122,2.02e-07,2;UBERON:0001954,3.71e-07,2;UBERON:0003022,3.71e-07,2;UBERON:0002421,3.71e-07,2;UBERON:0002600,3.71e-07,2;UBERON:0002771,3.82e-07,2;UBERON:0000483,4.08e-07,306;UBERON:0001905,4.70e-07,2;UBERON:0002757,4.70e-07,2;UBERON:0010134,4.70e-07,2;UBERON:0005408,4.70e-07,2;UBERON:0001899,4.70e-07,2;UBERON:0001871,4.88e-07,6;UBERON:0001897,5.62e-07,2;UBERON:0010225,5.62e-07,2;UBERON:0000119,5.93e-07,309;UBERON:0002702,8.96e-07,2;UBERON:0002148,9.23e-07,2;UBERON:0006331,9.23e-07,2;UBERON:0009662,9.23e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0.684372125364421,0.627713197974014,0.458480434487708,0.246301768349837,0.314843125254717,0.393364276848904,1.15148819429164,0.154816123316076,0,0,0,0.154934401160603,0.426507697462265,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0.697287110717054,0.822335776043652,0,0,0.512321413058201,0,0.344745680736619,0,0,0.564727018627814,0,0.449446968890169,0,0.320929027076094,1.27867425159808,0.329851300186716,0,0,0.290209238628584,0.56738522469114,1.24564449799115,0.502497330513487,1.0429658368404,0.868755378820466,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0.419317291016752,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0.590129310341499,0.786021525498329,0.822405995998037,0,0.651844533267181,0.473447805734733,1.94826728407911,0.557052284425868,0,1.10766947291811,1.08321545506006,0.128091319725675,0.780356085359269,0,0,0,0.593146252648242,0,0,0.226618685395132,0,0.34362744548263,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0.802320587350522,0.868946423296794,2.43806866313962,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.982343066232845,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.34779121492523,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,1.4512968087854,0.576479813667846,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0.788123040807709,1.07813787429759,0.256686072559497,0.508189248444927,0,0,0.335032530668698,1.27587750330633,0,2.99161459204025,0.828831026872071,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,2.37937552888281,0.640944426764839,0,0.245040215981032,0,0,0.426851060090485,0.318852545457645,0,0.383010740264733,0.846694330895531,0,0.280797178113459,0,0,0,0,0.321176150207399,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0,1.23087398947712,0,0,0,0,0.146508179271894,0.121360521749513,0.334330152832435,0.284136146806413,0.23874448473769,0,0,0.994147647766298,2.67271891179974,0.111308705022906,0.329607748453519,0.422250816255987,0.796991953004279,0,2.77126022639704,0,0,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,0,0,0,1.20598527610407,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0.291604613383254,1.73624994933292,5.31444831488303,3.0149109656352,7.62908681585416,2.54332297841817,1.47773809476774,1.53569778007781,0,0,0.538651809526579,0,0.23056390438806,0,0.108647371922008,0.638002319463839,0.0915975934018623,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0,0.189753732724185,0,0.421996129056054,0.979396848954886,0,0,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.104421949505455,3.10045211711114,0.802577647298789,2.81117334870407,0.547364367646998,0,0,0.789168805698781,0,1.83643656978294,0.252746318513952,0.60129367765797,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.7472666824203,0,0,0.0730893170861856,0,0,1.5003541537555,0,0,0,0.633107959558787,0.586654148204409,0.0801588202515337,0,0,0,0.229073192331831,3.26030495937733,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0.547621515567972,0,0,0.262887354279314,0,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0.164831716762333,0,0,0.169346664131569,2.38568906942791,3.81369537112412,0.321506296930038,0.412618309791701,0.415440338029185,0.2249738915515,0,0.668245123238271,0,0.157611414598396,0.209818352539992,0,0.179287339332845,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0.1641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| |||
|short_description=p6@RFX3 | |||
}} |
Revision as of 00:37, 23 January 2014
Short description: | p6@RFX3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RFX3_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 119bp_to_ENST00000302303, ENST00000381985, ENST00000381986, ENST00000381992, ENST00000382004, NM_002919, NM_134428, uc003zhr.2, uc003zhs.1, uc010mhd.2, uc010mhe.1_5end |
EntrezGene: | RFX3 |
HGNC: | 9984 |
UniProt: | E9PGD7E9PGD6F6UGA0P48380Q5JTM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data