FFCP PHASE1:Hg19::chr9:3526047..3526146,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK125504_5end | |||
|coexpression_cluster_id=C1306 | |||
|description=CAGE_peak_1_at_AK125504_5end | |||
|id=chr9:3526047..3526146,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.51e-42!172;CL:0000566!1.51e-42!172;CL:0000738!1.95e-39!140;CL:0002032!4.42e-39!165;CL:0000837!4.42e-39!165;CL:0000988!5.12e-39!182;CL:0002031!3.06e-36!124;CL:0002087!1.68e-33!119;CL:0000763!9.61e-22!112;CL:0000049!9.61e-22!112;CL:0000766!2.22e-20!76;CL:0002057!1.91e-19!42;CL:0000557!3.24e-19!71;CL:0000839!3.71e-18!70;CL:0000860!4.45e-18!45;CL:0002009!7.82e-17!65;CL:0000838!1.15e-16!52;CL:0000542!3.85e-16!53;CL:0000051!3.85e-16!53;CL:0002194!5.51e-16!63;CL:0000576!5.51e-16!63;CL:0000040!5.51e-16!63;CL:0000559!5.51e-16!63;CL:0000791!8.21e-09!18;CL:0000789!8.21e-09!18;CL:0002420!8.21e-09!18;CL:0002419!8.21e-09!18;CL:0000790!8.21e-09!18;CL:0000219!2.78e-08!390;CL:0000945!3.55e-08!24;CL:0000826!3.55e-08!24;CL:0000084!3.95e-08!25;CL:0000827!3.95e-08!25;CL:0000134!7.47e-08!358;CL:0000236!1.49e-07!14;CL:0002320!3.09e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.95e-14;33!CL:0002057;2.95e-14;33!CL:0000576;1.92e-13;48!CL:0002087;1.37e-11;104!CL:0000473;2.22e-11;39!CL:0000234;2.22e-11;39!CL:0000766;4.36e-11;69!CL:0000542;4.40e-11;53!CL:0000791;1.56e-09;18!CL:0000789;1.56e-09;18!CL:0002419;1.56e-09;18!CL:0000738;3.55e-09;136!CL:0000084;5.04e-09;25!CL:0000236;2.24e-08;13!CL:0000945;2.53e-08;24!CL:0000763;4.43e-08;100!CL:0000988;8.79e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.76e-46,168;CL:0000988,3.45e-43,177;CL:0000738,3.96e-43,136;CL:0002032,1.16e-42,161;CL:0000837,1.16e-42,161;CL:0002031,4.19e-40,120;CL:0002087,2.90e-37,115;CL:0000763,5.85e-24,108;CL:0000049,5.85e-24,108;CL:0000766,3.63e-23,72;CL:0000557,1.46e-21,67;CL:0000860,2.86e-21,42;CL:0002057,2.86e-21,42;CL:0000839,2.32e-20,66;CL:0000473,4.30e-20,48;CL:0000234,4.30e-20,48;CL:0002009,2.57e-19,61;CL:0002194,2.32e-18,59;CL:0000576,2.32e-18,59;CL:0000040,2.32e-18,59;CL:0000559,2.32e-18,59;CL:0000838,5.40e-18,52;CL:0000542,3.44e-17,53;CL:0000051,3.44e-17,53;CL:0000791,1.50e-09,18;CL:0000789,1.50e-09,18;CL:0002420,1.50e-09,18;CL:0002419,1.50e-09,18;CL:0000790,1.50e-09,18;CL:0000134,2.66e-09,354;CL:0000219,2.89e-09,386;CL:0000084,8.97e-09,25;CL:0000827,8.97e-09,25;CL:0000945,1.12e-08,24;CL:0000826,1.12e-08,24;CL:0002320,2.25e-08,361;CL:0000236,3.64e-08,14;CL:0002393,5.65e-07,9;CL:0002397,5.65e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.06e-15;42!CL:0000051;4.40e-11;53!CL:0000790;1.56e-09;18!CL:0000049;6.10e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.04e-19!102;UBERON:0003061!4.04e-19!102;UBERON:0002371!8.44e-18!80;UBERON:0001474!2.56e-16!86;UBERON:0002193!5.40e-16!112;UBERON:0004765!3.29e-13!101;UBERON:0001434!3.29e-13!101;UBERON:0002405!1.40e-10!115;UBERON:0002384!2.81e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.46e-21,98;UBERON:0003061,6.46e-21,98;UBERON:0002371,2.96e-20,76;UBERON:0002405,1.14e-18,93;UBERON:0001474,3.40e-18,82;UBERON:0002193,4.54e-18,108;UBERON:0004765,6.98e-14,90;UBERON:0001434,5.39e-12,100;UBERON:0002384,2.86e-08,371 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.563817616383885,1.0007329835313,1.78784437770915,0,0,0.631719873426831,0.783556884599516,0,1.39560233594486,0.218441372130172,1.05506791291381,0.866364470720326,0.994192127183747,2.01697543935533,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,1.25381888591235,2.0036519099174,2.32686522623903,2.00868223351684,3.20936304141395,1.9704141467987,2.91229890860613,20.8483066729919,9.21190555433311,10.3726802621771,0,1.204823675113,1.84877005083394,2.16908161624845,2.98555388223585,8.22081230137572,16.6198622559563,9.6261334785668,10.199510923645,2.23915474239924,1.94336199611388,2.31818010870768,2.76256653681173,1.13362783106643,1.4555043671269,3.71886459049095,3.70051099219643,6.50383378879718,4.60307827715441,2.81776777182011,8.51336027598907,5.17118521104928,4.51839278508678,6.77132432971709,2.82363509313907,1.36453075028923,3.59557575112135,6.12167784741805,4.49300637906531,4.47535988059329,3.95821560224059,5.98390972864896,5.11469700639233,6.09439401120026,6.24123747160254,4.9825779919646,4.77372463987812,5.73631210262222,5.42972111762792,5.44859552370032,8.10210799172642,7.59509729858123,3.59133986730301,5.52771179909113,5.45112478321777,2.80821577866238,3.15371474967163,3.85741408072992,7.41033133727246,4.37616689837998,7.48923030434999,8.79981222306614,6.55366333514558,8.89509253863555,14.0820973446947,10.4102956629363,8.62128659931725,5.94940385506376,6.67837628174755,19.3532409497212,11.7447437874188,12.9972897562578,13.2171328579026,9.52864557068611,4.21414535640123,5.11445402295966,6.6811829667358,12.3360899399706,4.51403537554831,4.88883399950386,8.5220605032252,9.74133642039557,3.67654507721073,2.3568472597987,7.3106185212595,8.39491977671548,3.0741916734162,2.9913649938772,1.97325485524411,2.48715016007264,4.92665245749589,6.07974908964448,9.63146981122967,4.18142095219907,3.51258962362455,8.81407135284419,13.0578429283399,9.86776798876061,4.14135038621326,3.25541726928209,4.75226022224187,6.47473012034423,3.07167866770604,2.49861453104692,2.60454977248419,2.46338399076314,5.84659555351724,7.2208852861547,9.26876184849914,2.43806866313962,0,0.12786256184353,1.44575660953827,0,0.579386075843295,0,2.43317435151318,0.945348171640679,0.665188192387692,0.614843499851882,2.68507104770311,1.09288586487763,0.370784442784429,1.29818957461873,0.522389211897802,1.86141144726411,3.57735936458013,7.43593384014166,4.82894751728434,0,0,0.694281003215189,1.13061588384802,1.67799774483962,0,0.417989933073621,1.55050055501597,0.35576626268671,2.34304428935269,1.20848795132744,0,0.488124115096339,1.10298924103761,0.81014194788176,0.892997282840798,0.898117490504679,0.450445921933289,0,0,0.183201743930407,6.58902087180316,11.6334079244498,0,0.993943903390637,0.633152558322899,4.36950296683622,3.15520282823695,0,0.560677600142307,0,0.49333509683432,1.8672662123986,1.21239604862719,1.14423332179421,1.36221684880438,0,0.234321431833797,0.936480230490962,1.71141546463335,0.298897361103602,0.587172493218824,0.809364721840658,0.98315564691574,0.204154171254893,0.368502951935304,1.03325781175765,1.18800285728205,1.97813543422845,0,0.718618141816238,0.168336113954066,0.875829639103749,1.10825646193673,1.75591048352335,0.30648779579902,0.901428353439581,0.113432183160021,3.04962380671065,1.49490172172997,0.211931901159562,3.00091096084402,0.515262646192195,5.15281080091258,0.930584281657949,2.53164498361899,0.389748020644795,4.79624171063818,0.460249493211497,1.2931684545505,5.68015348026583,0.403008392910561,0.339121184620975,0.966304265816484,0.545492241181669,0.860413786167011,2.19552671033272,1.72288698817931,1.74290914304278,2.07322110030741,0.756962552626885,1.09493207722749,1.56449532329816,0.643240938192885,0,2.3218396401599,1.44375896333917,0.118306800039844,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.71181185733329,0.539325232640658,0.196221465125346,0,0,1.40241773803446,0.4115740113314,0,0,0,0,3.09024169590255,0.737930631258681,0.343135620597051,0.109750285408626,2.24803506515239,0.301586917234893,0.277765335475589,0,1.03993478527958,0,0.927443239800615,0.352226082707465,0.144366447761074,0,0.190254152234598,1.58040879591855,0,0.738651018262192,1.17002132569619,1.63494278517601,0.93733833986777,0.335964256397719,0.850650583454319,0.806026704325635,0.581267877027924,1.15014803749563,0.985326475791887,3.16974362447614,10.5737338925794,24.9327519411343,20.4512742150735,0.888970520090367,1.14596527667483,3.51652341630141,1.71072446022705,0.822619941626588,0.300343057843917,0.571652865261156,0.672786506072164,1.30788020649984,0,0.775630294546667,0,0,1.32969058292435,0,0.257207374262142,0,0.532844358032199,0.57191197463259,0,0.823240336780769,0,0,0,0,0,0.499864955910285,2.43247561282381,1.50677127429638,2.10833939483032,0.958499421966331,0,0,0.579125226670317,0.61642896765115,1.07436577943937,1.56919201590938,9.26044572949058,9.05635814409973,9.62572772098113,0.76228387266739,0,0.773288812777695,1.50764638800914,0.637938751653163,2.99602809578873,0,2.90090859405225,0.736148950314839,0,0.542530047399471,0.623912584592421,1.24900292158013,1.26161932027148,0.35142424497814,0.601892199455438,0,0,0,1.47495334833363,1.21637060255316,0.391602314925481,2.05886054286514,2.06768026122887,6.03999762292127,3.73546452312055,0.606255142892519,0,0.604780586659361,0,1.53461973288062,0.841980283299221,0.768834895534206,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.348631135379878,1.0877350463246,0.601519410909855,0.828728900423067,0.229628896329213,0.728364672026868,0.917870904715969,0.451199612907412,0.308061348417659,0,0,0.211103257785751,0,0.510281115829547,0,0,0.270946437543853,1.00337954770971,0.509752546090077,0,0.895499018888713,2.41185864310528,1.8300481571743,0.769350375349168,0.656029291399411,0.325378394664303,1.13345112812495,0.54941678891006,1.07262349896764,0,0,0,0.580024309752732,0.616194468458578,1.84204409671355,0.551346289938122,2.0409846524972,2.46528379654188,0.340906509664404,0.623224249527161,0.991709492165869,0.576570202095319,12.5060458244692,1.51736671283325,0.464845549297286,3.77774816196768,0.6970372701606,0.616067160352178,0.532306030317022,1.73986598415015,0.37064843820784,0.858749320451947,0.744316738719335,0,1.5250415513906,1.02359116524534,0.42793898803392,1.27281299170375,1.56989728039846,1.43897966066652,1.09814811894422,0.471249609382746,0.606547444719948,0,0.421258456238981,0.48763373908959,0.731140468893853,0,0.682499557039929,0.989838023675989,1.13008116620243,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0.6196469961995,0.563391205064483,1.14729081763241,0.196498082026242,0,1.06428319221179,0.844430541190656,1.31717957183961,0,0.699869440489966,0.577332676353072,2.01090682660736,1.08890984861323,2.07116361708914,0.43050537267123,0,2.66058092122005,0.459446800413919,2.53723804616085,1.52927441428475,0.569647187174163,1.19115887728894,0.822724546172388,1.29694662238543,1.08006287447623,0.79312517629427,1.38871292465715,0,0,0.743212700502875,1.73123055571734,2.34768083049767,1.27541018183058,1.39705560002972,1.53204296105893,3.81012448902989,1.94773164164733,6.73913227472301,5.47763229679661,1.88015874927628,0,1.35433422241283,2.89058535186659,2.82519590067467,1.27753871307098,0.687010689511529,0.614481528616916,1.78940886313933,2.0021897005429,1.36771666781428,3.06246791284767,4.92349595790849,3.2454681417118,0.99921590399346,0,2.99424864653152,1.31857361344705,0.970884173996107,1.00299045849731,0.852408440419239,2.14870036263921,0.296964680832639,1.22864280839693,1.9882952955326,0.984685914873589,1.22439575525196,2.96646973608167,2.11125408127993,1.19548792950642,2.48655523978033,3.27512572210559,0.920418142519393,2.46169610922139,0,0.269605053441981,0.716084698702437,1.53471711068062,0.295930216910801,2.3948309234694,1.11136990144637,0.969332746095218,1.20598527610407,1.99613798001194,0.7812832832557,0.174919999992391,2.17499872630438,1.93448862085349,1.5255219017566,1.18193840883968,3.44743373241465,3.49925536059905,1.90987494426621,0,2.65312164975897,0,1.76926815889959,1.77328571372128,0.438770794307945,2.39664619741778,0.41827123283581,1.07730361905316,0.797594390929008,1.1528195219403,0.628303510868405,0.760531603454056,1.91400695839152,0.366390373607449,0.533034776018635,3.06579894587209,1.41282230755522,0.498635045700469,2.25595660617181,1.37243774022418,2.01385904371011,2.27704479269022,2.38404868470568,0.210998064528027,0.979396848954886,0,3.24582959613137,0.995261931078505,0.530745387020035,1.22206028986725,2.6686901581256,1.11207545051853,0.626531697032732,2.22423738836234,0.802577647298789,1.1713222286267,1.64209310294099,0.586993856796269,1.69946265673865,1.57833761139756,2.41981432097328,1.53036380815245,1.5796644907122,2.40517471063188,0.311064574191741,0.664653872707185,0.330991955875499,1.2557316736289,1.19472429772959,0.853828638089378,0.138674673013139,1.04135843001079,0.979923974143776,0.609414446062818,2.62090002363045,0.859930162358083,0.580537987734511,1.24251839046515,1.31384731285135,0.581934098930517,1.3238419003725,0.90392296312213,0.959293472527256,0.397429223405979,1.70939149080872,0.391102765469606,0.881747022766871,2.13452994739353,0.39961921916426,0.288180834308212,2.06165873098648,1.71594997861965,2.73704116177484,3.10631338913581,1.41416420770077,0.407712618220842,0.313808538937,0.815985741090574,0.577901179803038,0,2.0535806833799,7.66479528401834,1.71906176567983,0.525774708558629,0.558564802544508,1.60412296808179,2.15361907373044,0,0.429226048136571,0.446342914883745,1.07493555978762,1.08089965062721,4.65983798109815,1.73323001075892,1.40106959247983,1.75249214020881,1.27955725969173,0.677386656526276,1.59045937961861,2.31545790389679,0.964518890790115,1.51293380256957,2.07720169014593,2.4747128070665,13.9284351820431,1.76173714308272,1.0063040627978,0.945668487590378,1.52118305591495,0.105600336519406,0.35857467866569,1.53532157855556,0.714695326373367,1.32418394073086,1.27134268827375,0,0,0.326587360109409,2.39460383124975,1.31348033198942,0.511164065356265,2.26624183040251,0.293104467356165,0,1.42211251997706,2.24795422962573,1.02652102730598,0.704815022316672,0.747511887973863,2.67247318669432,1.24271716604159,1.48849806543585,1.58089305518355,1.58330377895165,0,2.72008901684737,1.5041393641362,1.53172788381731,1.96723578425883,2.35581144375351,1.77213635993397,1.09823638411767,1.001527445652,2.29363678276028,3.21694249456872,1.8628920882415,3.32036723846954,1.74972571146949,0.909894705249887,0.285465333544967,0,5.1516839638757,1.88397337194073,0.74627401443437,1.63599316893057,0,1.32582103692562,3.0188148210309,1.77962244319307,0.915360273587694,1.20984739010591,0.932623203496683,0.887130899937803,0.796483835818512,0.899606224327209,0.931577741257556,1.24411862352257,0.797525143673985,0,1.20206087197775,0.380805212168795,1.22061219961398,0.909243296012797,0.537052785212442,2.32016879939247,0.796191777397232,0.400027764663154,0.686791410365586,1.01024846629776,2.52369796457302,0.57785949122191,1.07220795687463,0.260994291965212,0.226705925512272,1.389134845943,0.97894681802587,1.25362188757041,0,0.219284049578707,0.176689145945881,0.771656153083659,0.168942440653073,1.02496607435179,3.45430341731199,0.303859956177382,1.52084279766904,0.389720617678777,0.664324201566815,0.981392365535065,0.655219697692825,1.2288645437686,1.05656061679314,1.39991177098451,3.09406016113009,2.06657975592979,0,1.65695355226657,1.258915569475,1.24415452006595,1.79052119825112,0.862598491173454,0.786329709279482,2.51182167841632,0.848662649770126,1.91317428091515,1.73510069962603,3.35186950783946,0.318004350653419,4.25853423006768,0,0.705351887381368,0.6124909547064,1.86264752779733,1.41696576325585,1.91560630868582,1.23069818544453,1.26035848110859,1.31398779682014,2.26065903884592,0,0.687034029507179,1.76954585021611,0.366857197043358,1.27078232765372,1.1441462864015,2.0710797781803,0.596748666348824,0.676892955143315,0.60511520611056,2.34454203369928,1.57144016688853,2.62035068016155,1.77427303460454,2.36381546164381,0.781078098613847,0.413373593002368,1.14148458349032,2.7348740450911,0.548257766857182,3.47347824872506,0.351742488719241,0.511049710558381,1.60710550763486,2.01770233331294,2.42786241694653,3.87025725297206,0.79832133146375,1.15233987555779,0.857440047187092,1.15548546060614,1.05236437700559,0.236387681767936,0.667388411352415,0.863424021355654,3.45654297815204,1.96190514319652,0.913158720509496,0,0.47775168788705,2.14429632529969,2.21219056425817,1.51113852978563,0.347716544605159,1.60342272946051,0.207216164163037,0.6828739083758,1.38251932362818,0.860454717640555,1.89331201168905,1.78948149994231,2.11693525095465,0.9164274741762,0.93061915699296,1.91107787795487,0.559277158988962,1.27595303699816,3.41370189950354,6.47428837187895,1.43727929598746,0,3.39997695141398,2.57333409808316,2.38740930193642,0.356760272332706,1.58124514854544,1.31928620094515,3.32118255846682,1.389134845943,1.5299169235277,0.940634592723046,0.735444965261716,0.235676547101626,0.981542335574726,3.86160320425212,2.9585900930838,0.339854229375634,1.50374268767766,2.2560260790752,1.89888196257365,5.35661815816973,0.705789743431384,0.722172300202514,1.46067277649303,2.2936464170227,4.01350832824064,1.73548718412503,1.35982980381829,1.74540276136151,2.645134202577,1.85997509083376,0.924351257262837,0,0.630832124175395,0.327796715891087,3.29416102629736,0.61193297845189,1.06886962106224,0.735159196278759,0.50141507858475,1.36401656792831,4.28742608249886,0,2.58582489654738,2.98527574661373,2.14257988317366,2.64814530327625,3.97278171493491,2.13050538903166,0.954707374172474,3.63810940124795,2.39488422686657,1.02669990325584,1.88585748440845,1.36272190246085,1.33064142618405,1.46525883499754,0.960546112899439,1.9307228228694,0.718601616852695,0,2.68931177202306,1.22068853494722,1.33151354837103,2.01273793591026,1.28227396921293 | |||
|short_description=p1@AK125504 | |||
}} |
Revision as of 00:37, 23 January 2014
Short description: | p1@AK125504 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK125504_5end |
Coexpression cluster: | C1306_CD4_Mast_Basophils_Natural_CD19_CD14_CD8 |
Association with transcript: | 0bp_to_AK125504_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.46e-21 | 98 |
blood island | 6.46e-21 | 98 |
bone marrow | 2.96e-20 | 76 |
immune system | 1.14e-18 | 93 |
bone element | 3.40e-18 | 82 |
hemolymphoid system | 4.54e-18 | 108 |
skeletal element | 6.98e-14 | 90 |
skeletal system | 5.39e-12 | 100 |
connective tissue | 2.86e-08 | 371 |