FFCP PHASE1:Hg19::chrX:48327999..48328010,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-54bp_to_ENST00000488083_5end | |||
|description=CAGE_peak_24_at_SLC38A5_5end | |||
|id=chrX:48327999..48328010,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.02e-10;9!CL:0002632;1.02e-10;9!CL:0002328;1.26e-08;3!CL:0000307;1.26e-08;3!CL:0002368;1.05e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,9.69e-11,9;CL:0002632,9.69e-11,9;CL:0002328,1.04e-08,3;CL:0000068,1.40e-08,3;CL:0000069,1.40e-08,3;CL:0000307,1.40e-08,3;CL:0000377,1.40e-08,3;CL:0002368,1.02e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;1.26e-08;3 | |||
|ontology_enrichment_disease=DOID:2531!1.64e-09!51;DOID:0060083!1.64e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:3369;3.67e-23;1!DOID:1192;1.26e-08;3!DOID:3093;2.85e-08;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.62e-23,1;DOID:1192,1.12e-08,3;DOID:3093,2.65e-08,11 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.18e-09!9;UBERON:0001004!1.27e-08!72;UBERON:0001557!7.94e-08!19;UBERON:0000065!1.35e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.26e-08;3!UBERON:0002031;1.26e-08;3!UBERON:0007196;8.58e-07;15!UBERON:0001558;8.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.04e-08,3;UBERON:0002031,1.04e-08,3;UBERON:0007196,8.33e-07,15;UBERON:0001558,8.33e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.458480434487708,0.328402357799783,0.550975469195755,0,0,0,0,1.50602959389125,0,0.309868802321207,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0,0,0.973269740605272,0,0,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,1.49091585508596,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0.818238361772504,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.354920400119532,1.01150814046861,0.482022059766964,0.441175890929576,0.653638332277218,0.474541238222193,0.404493924480493,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.737476674166813,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0.576570202095319,0.638063562472921,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0.865999014529609,0,1.08890984861323,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0.159426272728822,0.399158742865633,0,0.211673582723883,0,0,0,0.626719583092093,0,0,0,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0.835218521685727,1.23087398947712,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0.110579259931225,0,0,0.32681539055697,0,0,0,0,0,0,0.638002319463839,0,0,0,0.470940769185074,0.166211681900156,0.225595660617181,0.784250137270958,0.839107934879214,0.37950746544837,0,0,0,0,0,0,0,0,0,0.370691816839509,0.522109747527277,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,2.99944626996164,2.55812609801649,2.13500188338344,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.471824806979294,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24513771442608,0,0,0,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0.853533837553127,0.172214979660816,0,0,0.559518030877778,0,0.255788742607303,0,0.471797825567689,0,0,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.785181748008205,0.235939446695481,0,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0,0,0,0.329821550236287,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0.0999411559249289,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0.0636471582781649,0,0.435433495793923,0,0.134704106029175,0,0,0,0.213454691755431,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p24@SLC38A5 | |||
}} |
Revision as of 05:34, 23 January 2014
Short description: | p24@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_SLC38A5_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000488083_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 9.69e-11 | 9 |
epithelial cell of lower respiratory tract | 9.69e-11 | 9 |
bronchial epithelial cell | 1.04e-08 | 3 |
duct epithelial cell | 1.40e-08 | 3 |
branched duct epithelial cell | 1.40e-08 | 3 |
tracheal epithelial cell | 1.40e-08 | 3 |
tracheoblast | 1.40e-08 | 3 |
respiratory epithelial cell | 1.02e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.04e-08 | 3 |
epithelium of bronchus | 1.04e-08 | 3 |
tracheobronchial tree | 8.33e-07 | 15 |
lower respiratory tract | 8.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.62e-23 | 1 |
peripheral nervous system neoplasm | 1.12e-08 | 3 |
nervous system cancer | 2.65e-08 | 11 |