FFCP PHASE1:Hg19::chr20:62273952..62273958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:62273952..62273958,- | |||
|description=CAGE_peak_at_chr20:62273952..62273958,- | |description=CAGE_peak_at_chr20:62273952..62273958,- | ||
|id=chr20:62273952..62273958,- | |id=chr20:62273952..62273958,- |
Latest revision as of 16:22, 28 July 2015
Short description: | p@chr20:62273952..62273958, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:62273952..62273958, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p@chr20:62273952..62273958- |
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0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.60e-14 | 3 |
kidney cortex tubule cell | 1.60e-14 | 3 |
epithelial cell of proximal tubule | 1.60e-14 | 3 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 1.60e-14 | 3 |
region of nephron tubule | 1.60e-14 | 3 |
proximal tubule | 1.60e-14 | 3 |
bile duct | 5.92e-08 | 6 |
digestive system duct | 5.92e-08 | 6 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.30e-40 | 1 |
mucinous cystadenocarcinoma | 3.30e-40 | 1 |
thoracic cancer | 2.53e-11 | 4 |
breast cancer | 2.53e-11 | 4 |
adenocarcinoma | 2.35e-07 | 25 |
Showing 1 to 5 of 5 entries