FFCP PHASE1:Mm9::chr3:58176362..58176392,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1793|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:58176362..58176392,-|id=chr3:58176362..58176392,-|ontology_enrichment_celltype=CL:0000066!9.81e-13!25;CL:0002563!2.58e-11!9;CL:0002251!2.58e-11!9;CL:0002076!1.57e-10!15;CL:0002321!3.15e-10!70;CL:0000220!3.15e-10!70;CL:0000223!4.99e-10!20;CL:0000075!9.94e-09!7;CL:0000239!5.35e-08!6;CL:0000677!5.35e-08!6;CL:0000212!5.35e-08!6;CL:0000584!5.35e-08!6|ontology_enrichment_celltype_v019_2=CL:0000066,3.66e-45,25;CL:0000223,8.64e-39,20;CL:0002076,7.29e-38,15;CL:0002563,6.03e-37,9;CL:0002251,6.03e-37,9;CL:0000239,7.05e-25,6;CL:0000677,7.05e-25,6;CL:0000584,7.05e-25,6;CL:0000075,2.91e-21,7;CL:0002250,1.36e-13,3;CL:0002321,1.57e-12,70;CL:0000682,2.24e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!2.58e-11!9;UBERON:0004808!2.58e-11!9;UBERON:0001277!2.58e-11!9;UBERON:0000485!1.25e-10!11;UBERON:0001242!6.65e-07!13;UBERON:0000060!6.65e-07!13;UBERON:0001262!6.65e-07!13;UBERON:0004786!6.65e-07!13;UBERON:0000344!9.93e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.03e-37,9;UBERON:0004808,6.03e-37,9;UBERON:0001277,6.03e-37,9;UBERON:0000485,5.36e-30,11;UBERON:0001242,3.50e-25,13;UBERON:0001262,3.50e-25,13;UBERON:0004786,3.50e-25,13;UBERON:0000344,1.20e-21,15;UBERON:0004923,5.10e-13,24;UBERON:0003929,8.84e-11,55;UBERON:0000160,9.14e-10,31;UBERON:0000490,1.35e-08,66;UBERON:0005911,4.04e-08,69|phase1_expression=0,5.23463111459042,5.0049916332849,5.44435580352294,5.50985302940982,3.18970616632591,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,2.29692785646008,2.15380998079537,1.29282739611533,0,0,0,0,0,0,12.9983228888074,2.65975432573588,12.8626694445293,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.183546752161682,2.34717403304412,0.436050312760893,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,1.0165335962074,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0.453429360640713,19.7107852317141,1.72084775396277,26.5188820146023,0,0,0,0,0,0,0,0.422530259330042,0,2.54805239706646,0,1.94841936910093,1.01343946190039,0,0.34255163915718,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0.583826711835847,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,1.95219372148319,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0,0,0,1.48397627647332,0.645857706783622,0.301564624640779,0.238744688006273,0.492422699235184,0.291480836629851,0,0,0,0,0,0,0,0.679913719975421,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0.539457385539283,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr3:58176362..58176392,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1793 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:58176362..58176392,- | |||
|description=CAGE_peak_at_chr3:58176362..58176392,- | |||
|id=chr3:58176362..58176392,- | |||
|ontology_enrichment_celltype=CL:0000066!9.81e-13!25;CL:0002563!2.58e-11!9;CL:0002251!2.58e-11!9;CL:0002076!1.57e-10!15;CL:0002321!3.15e-10!70;CL:0000220!3.15e-10!70;CL:0000223!4.99e-10!20;CL:0000075!9.94e-09!7;CL:0000239!5.35e-08!6;CL:0000677!5.35e-08!6;CL:0000212!5.35e-08!6;CL:0000584!5.35e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.66e-45,25;CL:0000223,8.64e-39,20;CL:0002076,7.29e-38,15;CL:0002563,6.03e-37,9;CL:0002251,6.03e-37,9;CL:0000239,7.05e-25,6;CL:0000677,7.05e-25,6;CL:0000584,7.05e-25,6;CL:0000075,2.91e-21,7;CL:0002250,1.36e-13,3;CL:0002321,1.57e-12,70;CL:0000682,2.24e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!2.58e-11!9;UBERON:0004808!2.58e-11!9;UBERON:0001277!2.58e-11!9;UBERON:0000485!1.25e-10!11;UBERON:0001242!6.65e-07!13;UBERON:0000060!6.65e-07!13;UBERON:0001262!6.65e-07!13;UBERON:0004786!6.65e-07!13;UBERON:0000344!9.93e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.03e-37,9;UBERON:0004808,6.03e-37,9;UBERON:0001277,6.03e-37,9;UBERON:0000485,5.36e-30,11;UBERON:0001242,3.50e-25,13;UBERON:0001262,3.50e-25,13;UBERON:0004786,3.50e-25,13;UBERON:0000344,1.20e-21,15;UBERON:0004923,5.10e-13,24;UBERON:0003929,8.84e-11,55;UBERON:0000160,9.14e-10,31;UBERON:0000490,1.35e-08,66;UBERON:0005911,4.04e-08,69 | |||
|phase1_expression=0,5.23463111459042,5.0049916332849,5.44435580352294,5.50985302940982,3.18970616632591,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,2.29692785646008,2.15380998079537,1.29282739611533,0,0,0,0,0,0,12.9983228888074,2.65975432573588,12.8626694445293,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.183546752161682,2.34717403304412,0.436050312760893,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,1.0165335962074,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0.453429360640713,19.7107852317141,1.72084775396277,26.5188820146023,0,0,0,0,0,0,0,0.422530259330042,0,2.54805239706646,0,1.94841936910093,1.01343946190039,0,0.34255163915718,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0.154267112887378,0.465067889500816,0,0.583826711835847,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,1.95219372148319,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0.913394847343798,0,0,0,1.48397627647332,0.645857706783622,0.301564624640779,0.238744688006273,0.492422699235184,0.291480836629851,0,0,0,0,0,0,0,0.679913719975421,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0.539457385539283,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr3:58176362..58176392,- | |||
}} | |||
Latest revision as of 21:35, 3 August 2015
| Short description: | p@chr3:58176362..58176392, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr3:58176362..58176392, - |
| Coexpression cluster: | MCL_coexpression_mm9:1793 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 3.66e-45 | 25 |
| endodermal cell | 8.64e-39 | 20 |
| endo-epithelial cell | 7.29e-38 | 15 |
| intestinal epithelial cell | 6.03e-37 | 9 |
| epithelial cell of alimentary canal | 6.03e-37 | 9 |
| brush border epithelial cell | 7.05e-25 | 6 |
| gut absorptive cell | 7.05e-25 | 6 |
| enterocyte | 7.05e-25 | 6 |
| columnar/cuboidal epithelial cell | 2.91e-21 | 7 |
| intestinal crypt stem cell | 1.36e-13 | 3 |
| embryonic cell | 1.57e-12 | 70 |
| M cell of gut | 2.24e-12 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| epithelium of mucosa | 6.03e-37 | 9 |
| gastrointestinal system epithelium | 6.03e-37 | 9 |
| intestinal epithelium | 6.03e-37 | 9 |
| simple columnar epithelium | 5.36e-30 | 11 |
| intestinal mucosa | 3.50e-25 | 13 |
| wall of intestine | 3.50e-25 | 13 |
| gastrointestinal system mucosa | 3.50e-25 | 13 |
| mucosa | 1.20e-21 | 15 |
| organ component layer | 5.10e-13 | 24 |
| gut epithelium | 8.84e-11 | 55 |
| intestine | 9.14e-10 | 31 |
| unilaminar epithelium | 1.35e-08 | 66 |
| endo-epithelium | 4.04e-08 | 69 |