FFCP PHASE1:Mm9::chr11:93905425..93905435,+: Difference between revisions
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{{FFCP|EntrezGene=70834|HGNC=|MCL_coexpression_id=1|UniProt=Q5NC72|association_with_transcript=0bp_to_ENSMUST00000132079_5end|description=CAGE_peak_8_at_Spag9_5end|id=chr11:93905425..93905435,+|ontology_enrichment_celltype=CL:0000540!1.68e-14!33;CL:0000047!1.68e-14!33;CL:0000031!1.68e-14!33;CL:0000404!1.68e-14!33;CL:0000117!6.46e-13!23;CL:0000337!6.46e-13!23;CL:0000221!1.79e-12!44;CL:0000133!1.79e-12!44;CL:0002319!6.04e-12!43;CL:0000393!2.79e-10!39;CL:0000211!2.79e-10!39;CL:0000055!2.14e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.15e-12,23;CL:0000337,9.15e-12,23;CL:0000540,1.05e-08,33;CL:0000047,1.05e-08,33;CL:0000031,1.05e-08,33;CL:0000404,1.05e-08,33;CL:0002610,2.96e-08,3;CL:0002612,1.60e-07,3;CL:0002614,1.77e-07,3;CL:0002319,4.35e-07,43;CL:0000393,6.10e-07,39;CL:0000211,6.10e-07,39;CL:0000221,7.36e-07,44;CL:0000133,7.36e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.63e-32!73;UBERON:0005743!1.63e-32!73;UBERON:0000073!1.53e-31!75;UBERON:0001016!1.53e-31!75;UBERON:0004121!7.88e-28!102;UBERON:0000924!7.88e-28!102;UBERON:0006601!7.88e-28!102;UBERON:0002346!1.16e-25!71;UBERON:0003075!1.16e-25!71;UBERON:0007284!1.16e-25!71;UBERON:0001049!5.33e-25!52;UBERON:0005068!5.33e-25!52;UBERON:0006241!5.33e-25!52;UBERON:0007135!5.33e-25!52;UBERON:0000033!1.30e-24!63;UBERON:0000955!2.95e-24!50;UBERON:0006238!2.95e-24!50;UBERON:0002616!1.72e-23!49;UBERON:0003056!2.49e-20!49;UBERON:0003080!8.66e-20!40;UBERON:0002020!4.40e-19!34;UBERON:0002780!5.82e-19!39;UBERON:0001890!5.82e-19!39;UBERON:0006240!5.82e-19!39;UBERON:0002791!4.27e-16!29;UBERON:0003528!4.27e-16!29;UBERON:0001893!4.27e-16!29;UBERON:0007811!1.22e-12!86;UBERON:0000956!5.81e-11!21;UBERON:0001869!5.81e-11!21;UBERON:0000203!5.81e-11!21;UBERON:0000153!6.03e-11!94;UBERON:0002619!3.81e-09!17;UBERON:0002021!2.49e-08!10;UBERON:0000411!2.49e-08!10;UBERON:0001950!2.49e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.18e-44,54;UBERON:0001049,1.69e-40,52;UBERON:0005068,1.69e-40,52;UBERON:0006241,1.69e-40,52;UBERON:0007135,1.69e-40,52;UBERON:0001017,5.34e-40,73;UBERON:0001016,1.01e-38,75;UBERON:0000955,6.49e-34,47;UBERON:0006238,6.49e-34,47;UBERON:0002020,2.72e-32,34;UBERON:0002616,3.97e-32,46;UBERON:0002346,1.62e-31,64;UBERON:0003075,1.62e-31,64;UBERON:0007284,1.62e-31,64;UBERON:0004121,6.66e-29,95;UBERON:0000924,6.66e-29,95;UBERON:0006601,6.66e-29,95;UBERON:0010371,1.54e-28,73;UBERON:0003080,1.03e-26,40;UBERON:0003528,3.99e-26,29;UBERON:0002791,3.99e-26,29;UBERON:0001893,3.99e-26,29;UBERON:0002780,7.69e-25,39;UBERON:0001890,7.69e-25,39;UBERON:0006240,7.69e-25,39;UBERON:0010314,4.41e-21,92;UBERON:0003056,9.85e-21,49;UBERON:0002021,1.35e-20,10;UBERON:0000411,1.35e-20,10;UBERON:0001950,1.35e-20,10;UBERON:0002619,2.41e-16,17;UBERON:0000956,2.99e-15,21;UBERON:0001869,2.99e-15,21;UBERON:0000203,2.99e-15,21;UBERON:0000025,2.01e-14,114;UBERON:0004111,4.99e-14,122;UBERON:0003076,5.12e-14,12;UBERON:0003057,5.12e-14,12;UBERON:0002420,1.14e-12,8;UBERON:0007245,1.14e-12,8;UBERON:0010009,1.14e-12,8;UBERON:0010011,1.14e-12,8;UBERON:0000454,1.14e-12,8;UBERON:0011216,5.35e-10,194;UBERON:0002950,1.03e-09,4;UBERON:0001891,1.03e-09,4;UBERON:0009616,1.03e-09,4;UBERON:0010286,1.03e-09,4;UBERON:0002240,2.00e-09,6;UBERON:0005174,2.00e-09,6;UBERON:0001137,2.00e-09,6;UBERON:0004684,2.96e-08,3;UBERON:0002275,2.96e-08,3;UBERON:0000483,1.45e-07,174;UBERON:0002257,1.60e-07,3;UBERON:0002038,1.77e-07,3;UBERON:0009663,1.77e-07,3;UBERON:0009661,1.77e-07,3;UBERON:0000125,1.77e-07,3;UBERON:0002308,1.77e-07,3;UBERON:0000119,2.16e-07,176;UBERON:0001948,2.72e-07,5;UBERON:0002315,2.72e-07,5;UBERON:0000369,5.24e-07,5;UBERON:0002435,5.24e-07,5;UBERON:0000204,5.24e-07,5;UBERON:0010082,5.24e-07,5|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.414758449233911,0.945041568321835,0.420649922702764,0.285650984403804,1.32521124570968,0.61245399607477,0.0958454710182364,0.919218786610021,7.70811166995721,3.83062014255563,4.6081959976873,1.31886287730194,0.457438218012048,1.56274011167028,2.51264699101243,3.37657566019008,3.97275444219706,5.30331453852602,2.56269025438385,1.67759501242771,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,2.92780797011547,2.51336048176146,0,0,0,0,4.79330046095433,4.11750542536764,1.50785222535437,4.51943232499919,5.11430914660661,3.53239675751252,3.73154905055843,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0,0.452114453507145,0.408218994907967,0.640568601424249,0.468508622798644,0.776110112217047,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0.350296027101508,0,0.820837320395476,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,3.99550902271842,1.13195073617213,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.350679099451593,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0,0,0,0,0,0,0,5.29816946959713,2.46144541843627,0,0.757412781613119,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0,2.89189184779626,0.425820255624806,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,1.02131881726136,0.36012218806262,0,0.214337035031592,0.709360934569094,0.535106452806212,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,5.19190845629427,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.448549638131936,0,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.651021924219751,1.46803082195995,0.966336483304024,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,2.82375921308533,1.38097570952153,1.14579102687879,2.06223818812425,2.74033007908257,4.5323633843382,1.35004500046361,5.40385443869065,4.07828168085784,3.10656187051092,0.518936737920883,0,0.512200817262403,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0,0.377252682772152,0.280924522409647,0.320125762024346,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0,0.436039249896986,0.282328141245992,0.169229215783353,0.548783918618318,0.526139422875686,0.271608227691724,0,0.118635018124174,0.197008964751127,0.818462086339379,0.464810523557898,0,0,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421|short_description=p8@Spag9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70834 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5NC72 | |||
|association_with_transcript=0bp_to_ENSMUST00000132079_5end | |||
|cluster_id=chr11:93905425..93905435,+ | |||
|description=CAGE_peak_8_at_Spag9_5end | |||
|id=chr11:93905425..93905435,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.68e-14!33;CL:0000047!1.68e-14!33;CL:0000031!1.68e-14!33;CL:0000404!1.68e-14!33;CL:0000117!6.46e-13!23;CL:0000337!6.46e-13!23;CL:0000221!1.79e-12!44;CL:0000133!1.79e-12!44;CL:0002319!6.04e-12!43;CL:0000393!2.79e-10!39;CL:0000211!2.79e-10!39;CL:0000055!2.14e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.15e-12,23;CL:0000337,9.15e-12,23;CL:0000540,1.05e-08,33;CL:0000047,1.05e-08,33;CL:0000031,1.05e-08,33;CL:0000404,1.05e-08,33;CL:0002610,2.96e-08,3;CL:0002612,1.60e-07,3;CL:0002614,1.77e-07,3;CL:0002319,4.35e-07,43;CL:0000393,6.10e-07,39;CL:0000211,6.10e-07,39;CL:0000221,7.36e-07,44;CL:0000133,7.36e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.63e-32!73;UBERON:0005743!1.63e-32!73;UBERON:0000073!1.53e-31!75;UBERON:0001016!1.53e-31!75;UBERON:0004121!7.88e-28!102;UBERON:0000924!7.88e-28!102;UBERON:0006601!7.88e-28!102;UBERON:0002346!1.16e-25!71;UBERON:0003075!1.16e-25!71;UBERON:0007284!1.16e-25!71;UBERON:0001049!5.33e-25!52;UBERON:0005068!5.33e-25!52;UBERON:0006241!5.33e-25!52;UBERON:0007135!5.33e-25!52;UBERON:0000033!1.30e-24!63;UBERON:0000955!2.95e-24!50;UBERON:0006238!2.95e-24!50;UBERON:0002616!1.72e-23!49;UBERON:0003056!2.49e-20!49;UBERON:0003080!8.66e-20!40;UBERON:0002020!4.40e-19!34;UBERON:0002780!5.82e-19!39;UBERON:0001890!5.82e-19!39;UBERON:0006240!5.82e-19!39;UBERON:0002791!4.27e-16!29;UBERON:0003528!4.27e-16!29;UBERON:0001893!4.27e-16!29;UBERON:0007811!1.22e-12!86;UBERON:0000956!5.81e-11!21;UBERON:0001869!5.81e-11!21;UBERON:0000203!5.81e-11!21;UBERON:0000153!6.03e-11!94;UBERON:0002619!3.81e-09!17;UBERON:0002021!2.49e-08!10;UBERON:0000411!2.49e-08!10;UBERON:0001950!2.49e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.18e-44,54;UBERON:0001049,1.69e-40,52;UBERON:0005068,1.69e-40,52;UBERON:0006241,1.69e-40,52;UBERON:0007135,1.69e-40,52;UBERON:0001017,5.34e-40,73;UBERON:0001016,1.01e-38,75;UBERON:0000955,6.49e-34,47;UBERON:0006238,6.49e-34,47;UBERON:0002020,2.72e-32,34;UBERON:0002616,3.97e-32,46;UBERON:0002346,1.62e-31,64;UBERON:0003075,1.62e-31,64;UBERON:0007284,1.62e-31,64;UBERON:0004121,6.66e-29,95;UBERON:0000924,6.66e-29,95;UBERON:0006601,6.66e-29,95;UBERON:0010371,1.54e-28,73;UBERON:0003080,1.03e-26,40;UBERON:0003528,3.99e-26,29;UBERON:0002791,3.99e-26,29;UBERON:0001893,3.99e-26,29;UBERON:0002780,7.69e-25,39;UBERON:0001890,7.69e-25,39;UBERON:0006240,7.69e-25,39;UBERON:0010314,4.41e-21,92;UBERON:0003056,9.85e-21,49;UBERON:0002021,1.35e-20,10;UBERON:0000411,1.35e-20,10;UBERON:0001950,1.35e-20,10;UBERON:0002619,2.41e-16,17;UBERON:0000956,2.99e-15,21;UBERON:0001869,2.99e-15,21;UBERON:0000203,2.99e-15,21;UBERON:0000025,2.01e-14,114;UBERON:0004111,4.99e-14,122;UBERON:0003076,5.12e-14,12;UBERON:0003057,5.12e-14,12;UBERON:0002420,1.14e-12,8;UBERON:0007245,1.14e-12,8;UBERON:0010009,1.14e-12,8;UBERON:0010011,1.14e-12,8;UBERON:0000454,1.14e-12,8;UBERON:0011216,5.35e-10,194;UBERON:0002950,1.03e-09,4;UBERON:0001891,1.03e-09,4;UBERON:0009616,1.03e-09,4;UBERON:0010286,1.03e-09,4;UBERON:0002240,2.00e-09,6;UBERON:0005174,2.00e-09,6;UBERON:0001137,2.00e-09,6;UBERON:0004684,2.96e-08,3;UBERON:0002275,2.96e-08,3;UBERON:0000483,1.45e-07,174;UBERON:0002257,1.60e-07,3;UBERON:0002038,1.77e-07,3;UBERON:0009663,1.77e-07,3;UBERON:0009661,1.77e-07,3;UBERON:0000125,1.77e-07,3;UBERON:0002308,1.77e-07,3;UBERON:0000119,2.16e-07,176;UBERON:0001948,2.72e-07,5;UBERON:0002315,2.72e-07,5;UBERON:0000369,5.24e-07,5;UBERON:0002435,5.24e-07,5;UBERON:0000204,5.24e-07,5;UBERON:0010082,5.24e-07,5 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.414758449233911,0.945041568321835,0.420649922702764,0.285650984403804,1.32521124570968,0.61245399607477,0.0958454710182364,0.919218786610021,7.70811166995721,3.83062014255563,4.6081959976873,1.31886287730194,0.457438218012048,1.56274011167028,2.51264699101243,3.37657566019008,3.97275444219706,5.30331453852602,2.56269025438385,1.67759501242771,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,2.92780797011547,2.51336048176146,0,0,0,0,4.79330046095433,4.11750542536764,1.50785222535437,4.51943232499919,5.11430914660661,3.53239675751252,3.73154905055843,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0,0.452114453507145,0.408218994907967,0.640568601424249,0.468508622798644,0.776110112217047,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0.350296027101508,0,0.820837320395476,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,3.99550902271842,1.13195073617213,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.350679099451593,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0,0,0,0,0,0,0,5.29816946959713,2.46144541843627,0,0.757412781613119,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0,2.89189184779626,0.425820255624806,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,1.02131881726136,0.36012218806262,0,0.214337035031592,0.709360934569094,0.535106452806212,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,5.19190845629427,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.448549638131936,0,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.651021924219751,1.46803082195995,0.966336483304024,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,2.82375921308533,1.38097570952153,1.14579102687879,2.06223818812425,2.74033007908257,4.5323633843382,1.35004500046361,5.40385443869065,4.07828168085784,3.10656187051092,0.518936737920883,0,0.512200817262403,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0,0.377252682772152,0.280924522409647,0.320125762024346,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0,0.436039249896986,0.282328141245992,0.169229215783353,0.548783918618318,0.526139422875686,0.271608227691724,0,0.118635018124174,0.197008964751127,0.818462086339379,0.464810523557898,0,0,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p8@Spag9 | |||
}} |
Revision as of 08:26, 4 August 2015
Short description: | p8@Spag9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Spag9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000132079_5end |
EntrezGene: | 70834 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.15e-12 | 23 |
neuroblast (sensu Vertebrata) | 9.15e-12 | 23 |
neuron | 1.05e-08 | 33 |
neuronal stem cell | 1.05e-08 | 33 |
neuroblast | 1.05e-08 | 33 |
electrically signaling cell | 1.05e-08 | 33 |
raphe nuclei neuron | 2.96e-08 | 3 |
neuron of the ventral spinal cord | 1.60e-07 | 3 |
neuron of the substantia nigra | 1.77e-07 | 3 |
neural cell | 4.35e-07 | 43 |
electrically responsive cell | 6.10e-07 | 39 |
electrically active cell | 6.10e-07 | 39 |
ectodermal cell | 7.36e-07 | 44 |
neurectodermal cell | 7.36e-07 | 44 |