FFCP PHASE1:Mm9::chr14:56376703..56376730,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:56376703..56376730,+|id=chr14:56376703..56376730,+|ontology_enrichment_celltype=CL:0002563!7.96e-09!9;CL:0002251!7.96e-09!9;CL:0000239!1.10e-07!6;CL:0000677!1.10e-07!6;CL:0000212!1.10e-07!6;CL:0000584!1.10e-07!6;CL:0000066!1.41e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,1.55e-13,6;CL:0000677,1.55e-13,6;CL:0000584,1.55e-13,6;CL:0000075,1.77e-11,7;CL:0000066,4.85e-10,25;CL:0002563,9.80e-09,9;CL:0002251,9.80e-09,9;CL:0000682,1.75e-07,3;CL:0000223,4.05e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.36e-20!59;UBERON:0000160!1.05e-15!43;UBERON:0000344!1.58e-14!15;UBERON:0001242!1.16e-12!13;UBERON:0000060!1.16e-12!13;UBERON:0001262!1.16e-12!13;UBERON:0004786!1.16e-12!13;UBERON:0001007!1.51e-12!128;UBERON:0001555!1.51e-12!128;UBERON:0007026!1.51e-12!128;UBERON:0004119!4.45e-12!130;UBERON:0000925!4.45e-12!130;UBERON:0006595!4.45e-12!130;UBERON:0004923!5.90e-12!24;UBERON:0004921!2.43e-11!126;UBERON:0004185!2.43e-11!126;UBERON:0003350!7.96e-09!9;UBERON:0004808!7.96e-09!9;UBERON:0001277!7.96e-09!9;UBERON:0000485!9.36e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.30e-37,31;UBERON:0005409,1.68e-30,47;UBERON:0000344,4.14e-19,15;UBERON:0001007,4.82e-16,116;UBERON:0001555,4.82e-16,116;UBERON:0007026,4.82e-16,116;UBERON:0004119,1.25e-15,118;UBERON:0000925,1.25e-15,118;UBERON:0006595,1.25e-15,118;UBERON:0001242,1.25e-15,13;UBERON:0001262,1.25e-15,13;UBERON:0004786,1.25e-15,13;UBERON:0004921,4.65e-14,114;UBERON:0004923,8.33e-13,24;UBERON:0003350,9.80e-09,9;UBERON:0004808,9.80e-09,9;UBERON:0001277,9.80e-09,9;UBERON:0002108,9.96e-09,4;UBERON:0000485,5.44e-07,11;UBERON:0000331,8.54e-07,3;UBERON:0002116,8.54e-07,3;UBERON:0001204,8.54e-07,3;UBERON:0001168,8.54e-07,3|phase1_expression=0,19.1936474201649,16.3799726180233,37.8080264133538,35.5635968261907,2.18243053485457,3.03696432774183,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0,0,0,6.23970448894286,5.96464130774642,13.2073351746455,12.9228598847722,9.48073423817912,2.47030445293286,7.05684363327806,3.99114919179548,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0.860423876981386,0.679971333707751,1.61910957491345,1.29955283489534,1.79210754838934,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0,2.71914464507811,0,0,0,0,0,0,0,0,14.3055950916811,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,82.2742769629657,16.9248362664668,0,0,0.515469845288373,1.81515172161008,3.33567065767305,7.98947629672748,18.506633400236,11.8583247401288,8.54539709920916,7.36138946552258,8.18849165900304,17.0775687644302,17.9394581395996,15.9313018603494,0,0,0,0,0,0,0.126473074248515,0,0,0,1.1858105083486,0,0,0.449724224769707,0.405720242777006,0.482354319504834,0,0.287696137450811,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0,0,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2018292820448,0,0,0,0.185194527369712,0.753473828018764,0,0.457556346413045,0,0,0,1.90934123603023,0,0.203319467126849,0.432021363287205,0.418176592028937,2.62035076495413,1.21377911746339,0.743881101528023,1.04702376793612,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0,0,0.758091635291392,0,0,0.37456602987953,0.576226371643824,0.459483751644906,0.952587382566147,0.231768651889711,0.578727661391115,0,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.338458431566706,0.73171189149109,0.263069711437843,0.135804113845862,1.12228454331548,0.355905054372522,0.591026894253381,0,0.464810523557898,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p@chr14:56376703..56376730,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:56376703..56376730,+ | |||
|description=CAGE_peak_at_chr14:56376703..56376730,+ | |||
|id=chr14:56376703..56376730,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.96e-09!9;CL:0002251!7.96e-09!9;CL:0000239!1.10e-07!6;CL:0000677!1.10e-07!6;CL:0000212!1.10e-07!6;CL:0000584!1.10e-07!6;CL:0000066!1.41e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.55e-13,6;CL:0000677,1.55e-13,6;CL:0000584,1.55e-13,6;CL:0000075,1.77e-11,7;CL:0000066,4.85e-10,25;CL:0002563,9.80e-09,9;CL:0002251,9.80e-09,9;CL:0000682,1.75e-07,3;CL:0000223,4.05e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.36e-20!59;UBERON:0000160!1.05e-15!43;UBERON:0000344!1.58e-14!15;UBERON:0001242!1.16e-12!13;UBERON:0000060!1.16e-12!13;UBERON:0001262!1.16e-12!13;UBERON:0004786!1.16e-12!13;UBERON:0001007!1.51e-12!128;UBERON:0001555!1.51e-12!128;UBERON:0007026!1.51e-12!128;UBERON:0004119!4.45e-12!130;UBERON:0000925!4.45e-12!130;UBERON:0006595!4.45e-12!130;UBERON:0004923!5.90e-12!24;UBERON:0004921!2.43e-11!126;UBERON:0004185!2.43e-11!126;UBERON:0003350!7.96e-09!9;UBERON:0004808!7.96e-09!9;UBERON:0001277!7.96e-09!9;UBERON:0000485!9.36e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.30e-37,31;UBERON:0005409,1.68e-30,47;UBERON:0000344,4.14e-19,15;UBERON:0001007,4.82e-16,116;UBERON:0001555,4.82e-16,116;UBERON:0007026,4.82e-16,116;UBERON:0004119,1.25e-15,118;UBERON:0000925,1.25e-15,118;UBERON:0006595,1.25e-15,118;UBERON:0001242,1.25e-15,13;UBERON:0001262,1.25e-15,13;UBERON:0004786,1.25e-15,13;UBERON:0004921,4.65e-14,114;UBERON:0004923,8.33e-13,24;UBERON:0003350,9.80e-09,9;UBERON:0004808,9.80e-09,9;UBERON:0001277,9.80e-09,9;UBERON:0002108,9.96e-09,4;UBERON:0000485,5.44e-07,11;UBERON:0000331,8.54e-07,3;UBERON:0002116,8.54e-07,3;UBERON:0001204,8.54e-07,3;UBERON:0001168,8.54e-07,3 | |||
|phase1_expression=0,19.1936474201649,16.3799726180233,37.8080264133538,35.5635968261907,2.18243053485457,3.03696432774183,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0,0,0,6.23970448894286,5.96464130774642,13.2073351746455,12.9228598847722,9.48073423817912,2.47030445293286,7.05684363327806,3.99114919179548,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0.860423876981386,0.679971333707751,1.61910957491345,1.29955283489534,1.79210754838934,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0,0,0,0,0,0,2.71914464507811,0,0,0,0,0,0,0,0,14.3055950916811,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,82.2742769629657,16.9248362664668,0,0,0.515469845288373,1.81515172161008,3.33567065767305,7.98947629672748,18.506633400236,11.8583247401288,8.54539709920916,7.36138946552258,8.18849165900304,17.0775687644302,17.9394581395996,15.9313018603494,0,0,0,0,0,0,0.126473074248515,0,0,0,1.1858105083486,0,0,0.449724224769707,0.405720242777006,0.482354319504834,0,0.287696137450811,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0,0,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2018292820448,0,0,0,0.185194527369712,0.753473828018764,0,0.457556346413045,0,0,0,1.90934123603023,0,0.203319467126849,0.432021363287205,0.418176592028937,2.62035076495413,1.21377911746339,0.743881101528023,1.04702376793612,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,0,0,0.758091635291392,0,0,0.37456602987953,0.576226371643824,0.459483751644906,0.952587382566147,0.231768651889711,0.578727661391115,0,0.588795680537589,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.338458431566706,0.73171189149109,0.263069711437843,0.135804113845862,1.12228454331548,0.355905054372522,0.591026894253381,0,0.464810523557898,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p@chr14:56376703..56376730,+ | |||
}} |
Latest revision as of 12:57, 4 August 2015
Short description: | p@chr14:56376703..56376730, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:56376703..56376730, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.55e-13 | 6 |
gut absorptive cell | 1.55e-13 | 6 |
enterocyte | 1.55e-13 | 6 |
columnar/cuboidal epithelial cell | 1.77e-11 | 7 |
epithelial cell | 4.85e-10 | 25 |
intestinal epithelial cell | 9.80e-09 | 9 |
epithelial cell of alimentary canal | 9.80e-09 | 9 |
M cell of gut | 1.75e-07 | 3 |
endodermal cell | 4.05e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.30e-37 | 31 |
gastrointestinal system | 1.68e-30 | 47 |
mucosa | 4.14e-19 | 15 |
digestive system | 4.82e-16 | 116 |
digestive tract | 4.82e-16 | 116 |
primitive gut | 4.82e-16 | 116 |
endoderm-derived structure | 1.25e-15 | 118 |
endoderm | 1.25e-15 | 118 |
presumptive endoderm | 1.25e-15 | 118 |
intestinal mucosa | 1.25e-15 | 13 |
wall of intestine | 1.25e-15 | 13 |
gastrointestinal system mucosa | 1.25e-15 | 13 |
subdivision of digestive tract | 4.65e-14 | 114 |
organ component layer | 8.33e-13 | 24 |
epithelium of mucosa | 9.80e-09 | 9 |
gastrointestinal system epithelium | 9.80e-09 | 9 |
intestinal epithelium | 9.80e-09 | 9 |
small intestine | 9.96e-09 | 4 |
simple columnar epithelium | 5.44e-07 | 11 |
ileal mucosa | 8.54e-07 | 3 |
ileum | 8.54e-07 | 3 |
mucosa of small intestine | 8.54e-07 | 3 |
wall of small intestine | 8.54e-07 | 3 |