FFCP PHASE1:Mm9::chr17:32796011..32796024,+: Difference between revisions
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{{FFCP|EntrezGene=631304|HGNC=|MCL_coexpression_id=126|UniProt=G3UW81|association_with_transcript=-330bp_to_ENSMUST00000165061_5end|description=CAGE_peak_6_at_Cyp4f40_5end|id=chr17:32796011..32796024,+|ontology_enrichment_celltype=CL:0002563!1.24e-18!9;CL:0002251!1.24e-18!9;CL:0000239!2.52e-13!6;CL:0000677!2.52e-13!6;CL:0000212!2.52e-13!6;CL:0000584!2.52e-13!6;CL:0000075!2.61e-11!7;CL:0002076!1.79e-10!15;CL:0000066!1.86e-10!25;CL:0000473!1.22e-07!3;CL:0000627!1.22e-07!3;CL:0000682!1.22e-07!3;CL:0000223!1.99e-07!20;CL:0002250!6.91e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,2.68e-22,9;CL:0002251,2.68e-22,9;CL:0000239,1.24e-19,6;CL:0000677,1.24e-19,6;CL:0000584,1.24e-19,6;CL:0000075,9.25e-17,7;CL:0000066,3.54e-14,25;CL:0002076,5.98e-13,15;CL:0000682,6.64e-11,3;CL:0000223,1.95e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.67e-35!43;UBERON:0000344!1.16e-31!15;UBERON:0001242!3.22e-27!13;UBERON:0000060!3.22e-27!13;UBERON:0001262!3.22e-27!13;UBERON:0004786!3.22e-27!13;UBERON:0005409!9.72e-26!59;UBERON:0003350!1.24e-18!9;UBERON:0004808!1.24e-18!9;UBERON:0001277!1.24e-18!9;UBERON:0004923!2.27e-18!24;UBERON:0000485!6.37e-15!11;UBERON:0001007!4.83e-10!128;UBERON:0001555!4.83e-10!128;UBERON:0007026!4.83e-10!128;UBERON:0004119!8.90e-10!130;UBERON:0000925!8.90e-10!130;UBERON:0006595!8.90e-10!130;UBERON:0000331!1.64e-08!3;UBERON:0002116!1.64e-08!3;UBERON:0001204!1.64e-08!3;UBERON:0001168!1.64e-08!3;UBERON:0004921!2.22e-08!126;UBERON:0004185!2.22e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.46e-41,31;UBERON:0000344,1.03e-36,15;UBERON:0001242,4.21e-30,13;UBERON:0001262,4.21e-30,13;UBERON:0004786,4.21e-30,13;UBERON:0005409,7.68e-29,47;UBERON:0003350,2.68e-22,9;UBERON:0004808,2.68e-22,9;UBERON:0001277,2.68e-22,9;UBERON:0004923,4.93e-22,24;UBERON:0000485,4.73e-18,11;UBERON:0002108,1.73e-15,4;UBERON:0000331,3.07e-12,3;UBERON:0002116,3.07e-12,3;UBERON:0001204,3.07e-12,3;UBERON:0001168,3.07e-12,3;UBERON:0001007,6.84e-12,116;UBERON:0001555,6.84e-12,116;UBERON:0007026,6.84e-12,116;UBERON:0004119,1.28e-11,118;UBERON:0000925,1.28e-11,118;UBERON:0006595,1.28e-11,118;UBERON:0004921,1.41e-09,114;UBERON:0001962,2.89e-08,2;UBERON:0001961,2.89e-08,2;UBERON:0001744,2.89e-08,2;UBERON:0001155,5.10e-08,2;UBERON:0000059,5.10e-08,2|phase1_expression=0,2.79180326111489,1.81999695755814,2.72217790176147,2.00358291978539,2.18243053485457,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,4.81759490241057,2.8711598205751,2.58457197695445,2.37018355954478,15.0118501370535,9.07308467135751,5.09980174507201,0,0,0,1.1554064790051,1.66234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0,0.758168275301024,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,3.96675849995316,0,0,0,0.201683524623343,0.667134131534611,0.570676878337677,3.79623249235609,0.329397909448022,1.00534083520108,0.397912944082302,0.58489226135736,1.79763881730844,4.75503709724327,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92536898508813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@Cyp4f40}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:631304 | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UW81 | |||
|association_with_transcript=-330bp_to_ENSMUST00000165061_5end | |||
|cluster_id=chr17:32796011..32796024,+ | |||
|description=CAGE_peak_6_at_Cyp4f40_5end | |||
|id=chr17:32796011..32796024,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.24e-18!9;CL:0002251!1.24e-18!9;CL:0000239!2.52e-13!6;CL:0000677!2.52e-13!6;CL:0000212!2.52e-13!6;CL:0000584!2.52e-13!6;CL:0000075!2.61e-11!7;CL:0002076!1.79e-10!15;CL:0000066!1.86e-10!25;CL:0000473!1.22e-07!3;CL:0000627!1.22e-07!3;CL:0000682!1.22e-07!3;CL:0000223!1.99e-07!20;CL:0002250!6.91e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.68e-22,9;CL:0002251,2.68e-22,9;CL:0000239,1.24e-19,6;CL:0000677,1.24e-19,6;CL:0000584,1.24e-19,6;CL:0000075,9.25e-17,7;CL:0000066,3.54e-14,25;CL:0002076,5.98e-13,15;CL:0000682,6.64e-11,3;CL:0000223,1.95e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.67e-35!43;UBERON:0000344!1.16e-31!15;UBERON:0001242!3.22e-27!13;UBERON:0000060!3.22e-27!13;UBERON:0001262!3.22e-27!13;UBERON:0004786!3.22e-27!13;UBERON:0005409!9.72e-26!59;UBERON:0003350!1.24e-18!9;UBERON:0004808!1.24e-18!9;UBERON:0001277!1.24e-18!9;UBERON:0004923!2.27e-18!24;UBERON:0000485!6.37e-15!11;UBERON:0001007!4.83e-10!128;UBERON:0001555!4.83e-10!128;UBERON:0007026!4.83e-10!128;UBERON:0004119!8.90e-10!130;UBERON:0000925!8.90e-10!130;UBERON:0006595!8.90e-10!130;UBERON:0000331!1.64e-08!3;UBERON:0002116!1.64e-08!3;UBERON:0001204!1.64e-08!3;UBERON:0001168!1.64e-08!3;UBERON:0004921!2.22e-08!126;UBERON:0004185!2.22e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.46e-41,31;UBERON:0000344,1.03e-36,15;UBERON:0001242,4.21e-30,13;UBERON:0001262,4.21e-30,13;UBERON:0004786,4.21e-30,13;UBERON:0005409,7.68e-29,47;UBERON:0003350,2.68e-22,9;UBERON:0004808,2.68e-22,9;UBERON:0001277,2.68e-22,9;UBERON:0004923,4.93e-22,24;UBERON:0000485,4.73e-18,11;UBERON:0002108,1.73e-15,4;UBERON:0000331,3.07e-12,3;UBERON:0002116,3.07e-12,3;UBERON:0001204,3.07e-12,3;UBERON:0001168,3.07e-12,3;UBERON:0001007,6.84e-12,116;UBERON:0001555,6.84e-12,116;UBERON:0007026,6.84e-12,116;UBERON:0004119,1.28e-11,118;UBERON:0000925,1.28e-11,118;UBERON:0006595,1.28e-11,118;UBERON:0004921,1.41e-09,114;UBERON:0001962,2.89e-08,2;UBERON:0001961,2.89e-08,2;UBERON:0001744,2.89e-08,2;UBERON:0001155,5.10e-08,2;UBERON:0000059,5.10e-08,2 | |||
|phase1_expression=0,2.79180326111489,1.81999695755814,2.72217790176147,2.00358291978539,2.18243053485457,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03985603307473,4.81759490241057,2.8711598205751,2.58457197695445,2.37018355954478,15.0118501370535,9.07308467135751,5.09980174507201,0,0,0,1.1554064790051,1.66234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0,0.758168275301024,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,3.96675849995316,0,0,0,0.201683524623343,0.667134131534611,0.570676878337677,3.79623249235609,0.329397909448022,1.00534083520108,0.397912944082302,0.58489226135736,1.79763881730844,4.75503709724327,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92536898508813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Cyp4f40 | |||
}} |
Revision as of 15:25, 4 August 2015
Short description: | p6@Cyp4f40 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cyp4f40_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | -330bp_to_ENSMUST00000165061_5end |
EntrezGene: | 631304 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.68e-22 | 9 |
epithelial cell of alimentary canal | 2.68e-22 | 9 |
brush border epithelial cell | 1.24e-19 | 6 |
gut absorptive cell | 1.24e-19 | 6 |
enterocyte | 1.24e-19 | 6 |
columnar/cuboidal epithelial cell | 9.25e-17 | 7 |
epithelial cell | 3.54e-14 | 25 |
endo-epithelial cell | 5.98e-13 | 15 |
M cell of gut | 6.64e-11 | 3 |
endodermal cell | 1.95e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.46e-41 | 31 |
mucosa | 1.03e-36 | 15 |
intestinal mucosa | 4.21e-30 | 13 |
wall of intestine | 4.21e-30 | 13 |
gastrointestinal system mucosa | 4.21e-30 | 13 |
gastrointestinal system | 7.68e-29 | 47 |
epithelium of mucosa | 2.68e-22 | 9 |
gastrointestinal system epithelium | 2.68e-22 | 9 |
intestinal epithelium | 2.68e-22 | 9 |
organ component layer | 4.93e-22 | 24 |
simple columnar epithelium | 4.73e-18 | 11 |
small intestine | 1.73e-15 | 4 |
ileal mucosa | 3.07e-12 | 3 |
ileum | 3.07e-12 | 3 |
mucosa of small intestine | 3.07e-12 | 3 |
wall of small intestine | 3.07e-12 | 3 |
digestive system | 6.84e-12 | 116 |
digestive tract | 6.84e-12 | 116 |
primitive gut | 6.84e-12 | 116 |
endoderm-derived structure | 1.28e-11 | 118 |
endoderm | 1.28e-11 | 118 |
presumptive endoderm | 1.28e-11 | 118 |
subdivision of digestive tract | 1.41e-09 | 114 |
gut-associated lymphoid tissue | 2.89e-08 | 2 |
mucosa-associated lymphoid tissue | 2.89e-08 | 2 |
lymphoid tissue | 2.89e-08 | 2 |
colon | 5.10e-08 | 2 |
large intestine | 5.10e-08 | 2 |