FFCP PHASE1:Mm9::chr10:79622451..79622464,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:79622451..79622464,-|id=chr10:79622451..79622464,-|ontology_enrichment_celltype=CL:0000988!2.16e-11!32;CL:0002032!2.16e-11!32;CL:0000037!2.16e-11!32;CL:0000566!2.16e-11!32;CL:0000837!2.16e-11!32;CL:0002031!6.11e-11!25;CL:0000034!2.40e-09!97;CL:0002320!5.17e-09!46;CL:0000134!5.17e-09!46;CL:0000838!6.44e-09!12;CL:0000723!9.74e-09!91;CL:0000048!9.74e-09!91;CL:0000219!1.14e-08!54;CL:0000084!3.08e-08!11;CL:0000827!3.08e-08!11;CL:0000791!5.39e-08!9;CL:0000789!5.39e-08!9;CL:0002420!5.39e-08!9;CL:0002419!5.39e-08!9;CL:0000790!5.39e-08!9;CL:0000738!7.49e-08!17;CL:0002087!7.49e-08!17;CL:0000144!7.69e-08!121;CL:0000012!7.69e-08!121;CL:0000542!8.80e-08!13;CL:0000051!8.80e-08!13;CL:0002371!1.39e-07!118;CL:0000624!1.60e-07!8;CL:0000063!5.26e-07!66|ontology_enrichment_celltype_v019_2=CL:0000624,9.60e-21,8;CL:0002031,5.59e-20,25;CL:0000791,2.83e-18,9;CL:0000789,2.83e-18,9;CL:0002420,2.83e-18,9;CL:0002419,2.83e-18,9;CL:0000790,2.83e-18,9;CL:0000988,5.16e-17,32;CL:0002032,5.16e-17,32;CL:0000037,5.16e-17,32;CL:0000837,5.16e-17,32;CL:0000838,9.87e-17,12;CL:0000893,4.45e-16,6;CL:0002489,4.45e-16,6;CL:0000898,4.45e-16,6;CL:0000809,4.45e-16,6;CL:0000810,4.45e-16,6;CL:0000895,4.45e-16,6;CL:0000808,4.45e-16,6;CL:0000894,4.45e-16,6;CL:0000806,4.45e-16,6;CL:0000807,4.45e-16,6;CL:0000805,4.45e-16,6;CL:0002425,4.45e-16,6;CL:0002436,4.45e-16,6;CL:0002427,4.45e-16,6;CL:0002428,4.45e-16,6;CL:0002429,4.45e-16,6;CL:0002433,4.45e-16,6;CL:0002431,4.45e-16,6;CL:0002432,4.45e-16,6;CL:0000542,2.63e-15,13;CL:0000051,2.63e-15,13;CL:0000084,1.11e-14,11;CL:0000827,1.11e-14,11;CL:0002320,5.27e-14,46;CL:0000134,5.27e-14,46;CL:0000738,1.17e-13,17;CL:0002087,1.17e-13,17;CL:0000219,9.35e-13,54;CL:0000723,9.03e-08,91;CL:0000048,9.03e-08,91;CL:0000034,5.34e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,1.31e-10,6;DOID:0060100,6.88e-09,3;DOID:4045,6.88e-09,3|ontology_enrichment_uberon=UBERON:0002193!4.07e-13!48;UBERON:0002390!3.59e-12!45;UBERON:0003061!3.59e-12!45;UBERON:0000065!2.32e-09!41;UBERON:0004177!2.50e-09!29;UBERON:0002384!5.17e-09!46;UBERON:0001004!7.85e-09!42;UBERON:0000072!1.31e-08!27;UBERON:0006562!6.05e-08!24;UBERON:0001557!6.05e-08!24;UBERON:0001042!6.05e-08!24;UBERON:0008814!6.05e-08!24;UBERON:0009145!6.05e-08!24;UBERON:0002370!8.36e-08!23;UBERON:0000974!8.36e-08!23;UBERON:0004807!8.36e-08!23;UBERON:0005058!8.36e-08!23;UBERON:0003351!8.36e-08!23;UBERON:0009113!8.36e-08!23;UBERON:0003295!8.36e-08!23;UBERON:0009722!8.36e-08!23;UBERON:0005562!8.36e-08!23;UBERON:0007690!8.36e-08!23;UBERON:0003408!3.84e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.15e-17,48;UBERON:0002405,1.15e-17,48;UBERON:0002390,3.46e-17,45;UBERON:0003061,3.46e-17,45;UBERON:0002384,5.27e-14,46;UBERON:0004177,1.86e-13,29;UBERON:0005057,1.86e-13,29;UBERON:0002370,4.91e-13,23;UBERON:0000974,4.91e-13,23;UBERON:0004807,4.91e-13,23;UBERON:0005058,4.91e-13,23;UBERON:0003351,4.91e-13,23;UBERON:0009113,4.91e-13,23;UBERON:0003295,4.91e-13,23;UBERON:0009722,4.91e-13,23;UBERON:0005562,4.91e-13,23;UBERON:0007690,4.91e-13,23;UBERON:0000077,1.76e-12,35;UBERON:0006562,2.19e-12,24;UBERON:0003408,2.19e-12,24;UBERON:0001557,2.19e-12,24;UBERON:0001042,2.19e-12,24;UBERON:0008814,2.19e-12,24;UBERON:0009145,2.19e-12,24;UBERON:0000072,9.97e-11,27;UBERON:0003081,1.06e-07,87;UBERON:0007811,1.99e-07,36;UBERON:0000065,2.17e-07,41;UBERON:0001004,3.76e-07,42|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,3.35720640948098,4.36445038670167,8.66038747391376,2.73948749160808,3.90883579077148,2.9104124088305,4.45844052336887,0.333109761815663,0.607425802169478,0,3.47008381894061,2.87940310572051,2.54633791078818,0.0850432901510698,0.397163804803541,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,1.27006134691926,1.84519436275371,0,0.577703239502549,0.664938581433969,0.816677425049476,6.27797446105362,7.813353445238,2.61761871986899,18.2351761289614,4.09827290975067,3.88408282424923,0.251793635951155,0.405507724878058,0.550640256485045,0,0.218025156380447,0.219686182734472,0,0.279972843250725,1.43752564364972,2.51673909086605,3.62681071005672,0.672187598284928,0,0,0,0,0,0.633831403506179,0,0,0.449949858640699,1.97773272513395,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.45839474333043,0.294628585473668,0,0.186399445825301,0,0.151143120213571,3.76823835312181,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.70667914902068,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,1.55362730188303,0.148442139064825,0,0.608930956624282,0,0,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,0.479260498023681,0.599902730993408,0.508280908292259,0.449371918214468,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0,0.248813941220186,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0,0,0.257347907114715,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0,0.438599962275997,0.219550115291051,0,0.210289948564127,0.411618449517138,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,1.29327233116623,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0.8858587585951,0.159454768657487,0.327726629431476,0.518054945597687,0.578596234326046,0,1.08781136763742,0,0,0.321101179975584,0,0.163934945376675,0.252470927204373,0.315508219416257,0,0.215423397732799,0.955875191810208,0.668396022247182,0,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.532020700926821,0.356737635204141,0,0,0,0,0,0.49465875882444,0,0.0603129249281559,0,0.164140899745061,0,0,1.36696704638282,0,0.555583582109135,0.376736914009382,0.546776910884101,1.14389086603261,0,0.559805809294632,0.276399947608848,0,0,0,0.108005340821801,0,0.436725127492355,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,0,0,1.26404448251271,0,0.308132871494482,0.129920822977795,0.179026695667481,0.993406773906324,0.841368146639782,1.03382669022204,0.807731599585181,0.609654453239999,1.20991422164209,1.26695244961678,1.05833025804362,2.22066114144981,0.226730383615211,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0,0.214368379079066,0,0.564751842617067,0,0,1.20297227640581,0,0,2.02506750069542,0.45032120322422,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.37456602987953,0,0,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr10:79622451..79622464,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:79622451..79622464,- | |||
|description=CAGE_peak_at_chr10:79622451..79622464,- | |||
|id=chr10:79622451..79622464,- | |||
|ontology_enrichment_celltype=CL:0000988!2.16e-11!32;CL:0002032!2.16e-11!32;CL:0000037!2.16e-11!32;CL:0000566!2.16e-11!32;CL:0000837!2.16e-11!32;CL:0002031!6.11e-11!25;CL:0000034!2.40e-09!97;CL:0002320!5.17e-09!46;CL:0000134!5.17e-09!46;CL:0000838!6.44e-09!12;CL:0000723!9.74e-09!91;CL:0000048!9.74e-09!91;CL:0000219!1.14e-08!54;CL:0000084!3.08e-08!11;CL:0000827!3.08e-08!11;CL:0000791!5.39e-08!9;CL:0000789!5.39e-08!9;CL:0002420!5.39e-08!9;CL:0002419!5.39e-08!9;CL:0000790!5.39e-08!9;CL:0000738!7.49e-08!17;CL:0002087!7.49e-08!17;CL:0000144!7.69e-08!121;CL:0000012!7.69e-08!121;CL:0000542!8.80e-08!13;CL:0000051!8.80e-08!13;CL:0002371!1.39e-07!118;CL:0000624!1.60e-07!8;CL:0000063!5.26e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,9.60e-21,8;CL:0002031,5.59e-20,25;CL:0000791,2.83e-18,9;CL:0000789,2.83e-18,9;CL:0002420,2.83e-18,9;CL:0002419,2.83e-18,9;CL:0000790,2.83e-18,9;CL:0000988,5.16e-17,32;CL:0002032,5.16e-17,32;CL:0000037,5.16e-17,32;CL:0000837,5.16e-17,32;CL:0000838,9.87e-17,12;CL:0000893,4.45e-16,6;CL:0002489,4.45e-16,6;CL:0000898,4.45e-16,6;CL:0000809,4.45e-16,6;CL:0000810,4.45e-16,6;CL:0000895,4.45e-16,6;CL:0000808,4.45e-16,6;CL:0000894,4.45e-16,6;CL:0000806,4.45e-16,6;CL:0000807,4.45e-16,6;CL:0000805,4.45e-16,6;CL:0002425,4.45e-16,6;CL:0002436,4.45e-16,6;CL:0002427,4.45e-16,6;CL:0002428,4.45e-16,6;CL:0002429,4.45e-16,6;CL:0002433,4.45e-16,6;CL:0002431,4.45e-16,6;CL:0002432,4.45e-16,6;CL:0000542,2.63e-15,13;CL:0000051,2.63e-15,13;CL:0000084,1.11e-14,11;CL:0000827,1.11e-14,11;CL:0002320,5.27e-14,46;CL:0000134,5.27e-14,46;CL:0000738,1.17e-13,17;CL:0002087,1.17e-13,17;CL:0000219,9.35e-13,54;CL:0000723,9.03e-08,91;CL:0000048,9.03e-08,91;CL:0000034,5.34e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,1.31e-10,6;DOID:0060100,6.88e-09,3;DOID:4045,6.88e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!4.07e-13!48;UBERON:0002390!3.59e-12!45;UBERON:0003061!3.59e-12!45;UBERON:0000065!2.32e-09!41;UBERON:0004177!2.50e-09!29;UBERON:0002384!5.17e-09!46;UBERON:0001004!7.85e-09!42;UBERON:0000072!1.31e-08!27;UBERON:0006562!6.05e-08!24;UBERON:0001557!6.05e-08!24;UBERON:0001042!6.05e-08!24;UBERON:0008814!6.05e-08!24;UBERON:0009145!6.05e-08!24;UBERON:0002370!8.36e-08!23;UBERON:0000974!8.36e-08!23;UBERON:0004807!8.36e-08!23;UBERON:0005058!8.36e-08!23;UBERON:0003351!8.36e-08!23;UBERON:0009113!8.36e-08!23;UBERON:0003295!8.36e-08!23;UBERON:0009722!8.36e-08!23;UBERON:0005562!8.36e-08!23;UBERON:0007690!8.36e-08!23;UBERON:0003408!3.84e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.15e-17,48;UBERON:0002405,1.15e-17,48;UBERON:0002390,3.46e-17,45;UBERON:0003061,3.46e-17,45;UBERON:0002384,5.27e-14,46;UBERON:0004177,1.86e-13,29;UBERON:0005057,1.86e-13,29;UBERON:0002370,4.91e-13,23;UBERON:0000974,4.91e-13,23;UBERON:0004807,4.91e-13,23;UBERON:0005058,4.91e-13,23;UBERON:0003351,4.91e-13,23;UBERON:0009113,4.91e-13,23;UBERON:0003295,4.91e-13,23;UBERON:0009722,4.91e-13,23;UBERON:0005562,4.91e-13,23;UBERON:0007690,4.91e-13,23;UBERON:0000077,1.76e-12,35;UBERON:0006562,2.19e-12,24;UBERON:0003408,2.19e-12,24;UBERON:0001557,2.19e-12,24;UBERON:0001042,2.19e-12,24;UBERON:0008814,2.19e-12,24;UBERON:0009145,2.19e-12,24;UBERON:0000072,9.97e-11,27;UBERON:0003081,1.06e-07,87;UBERON:0007811,1.99e-07,36;UBERON:0000065,2.17e-07,41;UBERON:0001004,3.76e-07,42 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0,3.35720640948098,4.36445038670167,8.66038747391376,2.73948749160808,3.90883579077148,2.9104124088305,4.45844052336887,0.333109761815663,0.607425802169478,0,3.47008381894061,2.87940310572051,2.54633791078818,0.0850432901510698,0.397163804803541,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,1.27006134691926,1.84519436275371,0,0.577703239502549,0.664938581433969,0.816677425049476,6.27797446105362,7.813353445238,2.61761871986899,18.2351761289614,4.09827290975067,3.88408282424923,0.251793635951155,0.405507724878058,0.550640256485045,0,0.218025156380447,0.219686182734472,0,0.279972843250725,1.43752564364972,2.51673909086605,3.62681071005672,0.672187598284928,0,0,0,0,0,0.633831403506179,0,0,0.449949858640699,1.97773272513395,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.45839474333043,0.294628585473668,0,0.186399445825301,0,0.151143120213571,3.76823835312181,0,0,0,0,0,0.140444420131752,0.170430322578058,0.519572009205738,0.70667914902068,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,1.55362730188303,0.148442139064825,0,0.608930956624282,0,0,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,0.479260498023681,0.599902730993408,0.508280908292259,0.449371918214468,0,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0,0.248813941220186,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0,0,0.257347907114715,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0,0,0.438599962275997,0.219550115291051,0,0.210289948564127,0.411618449517138,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,1.29327233116623,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0,0.8858587585951,0.159454768657487,0.327726629431476,0.518054945597687,0.578596234326046,0,1.08781136763742,0,0,0.321101179975584,0,0.163934945376675,0.252470927204373,0.315508219416257,0,0.215423397732799,0.955875191810208,0.668396022247182,0,0.404810701674894,0.292255857911312,0.395287777946524,0.642642632843614,0.141940085208269,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.532020700926821,0.356737635204141,0,0,0,0,0,0.49465875882444,0,0.0603129249281559,0,0.164140899745061,0,0,1.36696704638282,0,0.555583582109135,0.376736914009382,0.546776910884101,1.14389086603261,0,0.559805809294632,0.276399947608848,0,0,0,0.108005340821801,0,0.436725127492355,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,0,0,1.26404448251271,0,0.308132871494482,0.129920822977795,0.179026695667481,0.993406773906324,0.841368146639782,1.03382669022204,0.807731599585181,0.609654453239999,1.20991422164209,1.26695244961678,1.05833025804362,2.22066114144981,0.226730383615211,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0,0.214368379079066,0,0.564751842617067,0,0,1.20297227640581,0,0,2.02506750069542,0.45032120322422,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.37456602987953,0,0,0.476293691283074,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr10:79622451..79622464,- | |||
}} |
Latest revision as of 19:30, 4 August 2015
Short description: | p@chr10:79622451..79622464, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79622451..79622464, - |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.15e-17 | 48 |
immune system | 1.15e-17 | 48 |
hematopoietic system | 3.46e-17 | 45 |
blood island | 3.46e-17 | 45 |
connective tissue | 5.27e-14 | 46 |
hemopoietic organ | 1.86e-13 | 29 |
immune organ | 1.86e-13 | 29 |
thymus | 4.91e-13 | 23 |
neck | 4.91e-13 | 23 |
respiratory system epithelium | 4.91e-13 | 23 |
hemolymphoid system gland | 4.91e-13 | 23 |
pharyngeal epithelium | 4.91e-13 | 23 |
thymic region | 4.91e-13 | 23 |
pharyngeal gland | 4.91e-13 | 23 |
entire pharyngeal arch endoderm | 4.91e-13 | 23 |
thymus primordium | 4.91e-13 | 23 |
early pharyngeal endoderm | 4.91e-13 | 23 |
mixed endoderm/mesoderm-derived structure | 1.76e-12 | 35 |
pharynx | 2.19e-12 | 24 |
gland of gut | 2.19e-12 | 24 |
upper respiratory tract | 2.19e-12 | 24 |
chordate pharynx | 2.19e-12 | 24 |
pharyngeal arch system | 2.19e-12 | 24 |
pharyngeal region of foregut | 2.19e-12 | 24 |
segment of respiratory tract | 9.97e-11 | 27 |
lateral plate mesoderm | 1.06e-07 | 87 |
craniocervical region | 1.99e-07 | 36 |
respiratory tract | 2.17e-07 | 41 |
respiratory system | 3.76e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 1.31e-10 | 6 |
musculoskeletal system cancer | 6.88e-09 | 3 |
muscle cancer | 6.88e-09 | 3 |