FFCP PHASE1:Mm9::chr6:105627762..105627788,+: Difference between revisions
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{{FFCP|EntrezGene=269784|HGNC=|MCL_coexpression_id=1|UniProt=Q69Z26|association_with_transcript=0bp_to_ENSMUST00000089208_5end|description=CAGE_peak_2_at_Cntn4_5end|id=chr6:105627762..105627788,+|ontology_enrichment_celltype=CL:0000117!2.82e-12!23;CL:0000337!2.82e-12!23;CL:0000540!3.66e-09!33;CL:0000047!3.66e-09!33;CL:0000031!3.66e-09!33;CL:0000404!3.66e-09!33;CL:0000221!9.21e-07!44;CL:0000133!9.21e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,6.83e-17,23;CL:0000337,6.83e-17,23;CL:0000540,2.17e-10,33;CL:0000047,2.17e-10,33;CL:0000031,2.17e-10,33;CL:0000404,2.17e-10,33;CL:0000393,3.97e-08,39;CL:0000211,3.97e-08,39;CL:0002319,5.50e-07,43;CL:0000221,9.80e-07,44;CL:0000133,9.80e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.09e-24!63;UBERON:0001017!2.68e-24!73;UBERON:0005743!2.68e-24!73;UBERON:0001049!5.20e-24!52;UBERON:0005068!5.20e-24!52;UBERON:0006241!5.20e-24!52;UBERON:0007135!5.20e-24!52;UBERON:0000073!4.83e-23!75;UBERON:0001016!4.83e-23!75;UBERON:0002346!4.94e-23!71;UBERON:0003075!4.94e-23!71;UBERON:0007284!4.94e-23!71;UBERON:0000955!1.94e-22!50;UBERON:0006238!1.94e-22!50;UBERON:0002616!1.08e-21!49;UBERON:0003056!5.77e-21!49;UBERON:0002020!1.97e-20!34;UBERON:0004121!8.88e-19!102;UBERON:0000924!8.88e-19!102;UBERON:0006601!8.88e-19!102;UBERON:0003080!6.27e-18!40;UBERON:0002780!4.19e-17!39;UBERON:0001890!4.19e-17!39;UBERON:0006240!4.19e-17!39;UBERON:0002791!1.86e-16!29;UBERON:0003528!1.86e-16!29;UBERON:0001893!1.86e-16!29;UBERON:0007811!9.55e-13!86;UBERON:0000153!2.70e-12!94;UBERON:0000956!1.13e-10!21;UBERON:0001869!1.13e-10!21;UBERON:0000203!1.13e-10!21;UBERON:0002619!1.37e-10!17;UBERON:0002021!2.06e-10!10;UBERON:0000411!2.06e-10!10;UBERON:0001950!2.06e-10!10;UBERON:0002420!3.24e-07!8;UBERON:0007245!3.24e-07!8;UBERON:0010009!3.24e-07!8;UBERON:0010011!3.24e-07!8;UBERON:0000454!3.24e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.12e-32,54;UBERON:0001049,4.27e-29,52;UBERON:0005068,4.27e-29,52;UBERON:0006241,4.27e-29,52;UBERON:0007135,4.27e-29,52;UBERON:0001017,4.75e-29,73;UBERON:0002346,4.30e-28,64;UBERON:0003075,4.30e-28,64;UBERON:0007284,4.30e-28,64;UBERON:0001016,5.55e-28,75;UBERON:0002020,4.94e-27,34;UBERON:0004121,7.36e-25,95;UBERON:0000924,7.36e-25,95;UBERON:0006601,7.36e-25,95;UBERON:0010371,2.32e-23,73;UBERON:0000955,1.40e-22,47;UBERON:0006238,1.40e-22,47;UBERON:0002616,2.08e-21,46;UBERON:0003528,3.77e-20,29;UBERON:0002791,3.77e-20,29;UBERON:0001893,3.77e-20,29;UBERON:0003056,5.49e-19,49;UBERON:0002021,3.78e-18,10;UBERON:0000411,3.78e-18,10;UBERON:0001950,3.78e-18,10;UBERON:0003080,5.20e-18,40;UBERON:0002780,9.55e-17,39;UBERON:0001890,9.55e-17,39;UBERON:0006240,9.55e-17,39;UBERON:0010314,1.93e-16,92;UBERON:0003076,3.48e-12,12;UBERON:0003057,3.48e-12,12;UBERON:0002420,3.61e-12,8;UBERON:0007245,3.61e-12,8;UBERON:0010009,3.61e-12,8;UBERON:0010011,3.61e-12,8;UBERON:0000454,3.61e-12,8;UBERON:0002619,1.60e-11,17;UBERON:0000956,1.55e-10,21;UBERON:0001869,1.55e-10,21;UBERON:0000203,1.55e-10,21;UBERON:0002240,7.78e-10,6;UBERON:0005174,7.78e-10,6;UBERON:0001137,7.78e-10,6;UBERON:0001948,1.30e-08,5;UBERON:0002315,1.30e-08,5;UBERON:0000025,2.52e-08,114;UBERON:0000369,2.71e-08,5;UBERON:0002435,2.71e-08,5;UBERON:0000204,2.71e-08,5;UBERON:0010082,2.71e-08,5;UBERON:0004111,3.14e-07,122;UBERON:0002950,5.49e-07,4;UBERON:0001891,5.49e-07,4;UBERON:0009616,5.49e-07,4;UBERON:0010286,5.49e-07,4|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,2.28520787523043,5.30084498283872,0.367472397644862,0.383381884072945,0,3.30347642998166,8.42736431362239,4.91540906419979,2.2420668914133,5.03182039813253,4.16730696445408,2.79182999001381,2.8138130501584,7.18151764551008,5.59794312399969,6.12198227436143,8.38797506213853,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,7.61230072230023,5.65506108396329,0,0,0,0,7.9389038884556,11.8950156732843,2.38743269014442,6.43149984711423,8.43861009190091,3.32460871295296,4.38051410282946,0.101839363850316,0,0,0.420883711772948,0.260240885925407,0.229902104433473,0,1.05493372485001,1.56483948048054,2.17793324484245,0.843315521037559,2.32833033665114,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.703578179943289,0.540186184383045,0,0,0,0,0,0,0,0,0,0,0,0,3.99550902271842,0.514523061896422,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.99259867206745,0,0,0,0.390438744296638,0.2154233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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269784 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q69Z26 | |||
|association_with_transcript=0bp_to_ENSMUST00000089208_5end | |||
|cluster_id=chr6:105627762..105627788,+ | |||
|description=CAGE_peak_2_at_Cntn4_5end | |||
|id=chr6:105627762..105627788,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.82e-12!23;CL:0000337!2.82e-12!23;CL:0000540!3.66e-09!33;CL:0000047!3.66e-09!33;CL:0000031!3.66e-09!33;CL:0000404!3.66e-09!33;CL:0000221!9.21e-07!44;CL:0000133!9.21e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.83e-17,23;CL:0000337,6.83e-17,23;CL:0000540,2.17e-10,33;CL:0000047,2.17e-10,33;CL:0000031,2.17e-10,33;CL:0000404,2.17e-10,33;CL:0000393,3.97e-08,39;CL:0000211,3.97e-08,39;CL:0002319,5.50e-07,43;CL:0000221,9.80e-07,44;CL:0000133,9.80e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.09e-24!63;UBERON:0001017!2.68e-24!73;UBERON:0005743!2.68e-24!73;UBERON:0001049!5.20e-24!52;UBERON:0005068!5.20e-24!52;UBERON:0006241!5.20e-24!52;UBERON:0007135!5.20e-24!52;UBERON:0000073!4.83e-23!75;UBERON:0001016!4.83e-23!75;UBERON:0002346!4.94e-23!71;UBERON:0003075!4.94e-23!71;UBERON:0007284!4.94e-23!71;UBERON:0000955!1.94e-22!50;UBERON:0006238!1.94e-22!50;UBERON:0002616!1.08e-21!49;UBERON:0003056!5.77e-21!49;UBERON:0002020!1.97e-20!34;UBERON:0004121!8.88e-19!102;UBERON:0000924!8.88e-19!102;UBERON:0006601!8.88e-19!102;UBERON:0003080!6.27e-18!40;UBERON:0002780!4.19e-17!39;UBERON:0001890!4.19e-17!39;UBERON:0006240!4.19e-17!39;UBERON:0002791!1.86e-16!29;UBERON:0003528!1.86e-16!29;UBERON:0001893!1.86e-16!29;UBERON:0007811!9.55e-13!86;UBERON:0000153!2.70e-12!94;UBERON:0000956!1.13e-10!21;UBERON:0001869!1.13e-10!21;UBERON:0000203!1.13e-10!21;UBERON:0002619!1.37e-10!17;UBERON:0002021!2.06e-10!10;UBERON:0000411!2.06e-10!10;UBERON:0001950!2.06e-10!10;UBERON:0002420!3.24e-07!8;UBERON:0007245!3.24e-07!8;UBERON:0010009!3.24e-07!8;UBERON:0010011!3.24e-07!8;UBERON:0000454!3.24e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.12e-32,54;UBERON:0001049,4.27e-29,52;UBERON:0005068,4.27e-29,52;UBERON:0006241,4.27e-29,52;UBERON:0007135,4.27e-29,52;UBERON:0001017,4.75e-29,73;UBERON:0002346,4.30e-28,64;UBERON:0003075,4.30e-28,64;UBERON:0007284,4.30e-28,64;UBERON:0001016,5.55e-28,75;UBERON:0002020,4.94e-27,34;UBERON:0004121,7.36e-25,95;UBERON:0000924,7.36e-25,95;UBERON:0006601,7.36e-25,95;UBERON:0010371,2.32e-23,73;UBERON:0000955,1.40e-22,47;UBERON:0006238,1.40e-22,47;UBERON:0002616,2.08e-21,46;UBERON:0003528,3.77e-20,29;UBERON:0002791,3.77e-20,29;UBERON:0001893,3.77e-20,29;UBERON:0003056,5.49e-19,49;UBERON:0002021,3.78e-18,10;UBERON:0000411,3.78e-18,10;UBERON:0001950,3.78e-18,10;UBERON:0003080,5.20e-18,40;UBERON:0002780,9.55e-17,39;UBERON:0001890,9.55e-17,39;UBERON:0006240,9.55e-17,39;UBERON:0010314,1.93e-16,92;UBERON:0003076,3.48e-12,12;UBERON:0003057,3.48e-12,12;UBERON:0002420,3.61e-12,8;UBERON:0007245,3.61e-12,8;UBERON:0010009,3.61e-12,8;UBERON:0010011,3.61e-12,8;UBERON:0000454,3.61e-12,8;UBERON:0002619,1.60e-11,17;UBERON:0000956,1.55e-10,21;UBERON:0001869,1.55e-10,21;UBERON:0000203,1.55e-10,21;UBERON:0002240,7.78e-10,6;UBERON:0005174,7.78e-10,6;UBERON:0001137,7.78e-10,6;UBERON:0001948,1.30e-08,5;UBERON:0002315,1.30e-08,5;UBERON:0000025,2.52e-08,114;UBERON:0000369,2.71e-08,5;UBERON:0002435,2.71e-08,5;UBERON:0000204,2.71e-08,5;UBERON:0010082,2.71e-08,5;UBERON:0004111,3.14e-07,122;UBERON:0002950,5.49e-07,4;UBERON:0001891,5.49e-07,4;UBERON:0009616,5.49e-07,4;UBERON:0010286,5.49e-07,4 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0,2.28520787523043,5.30084498283872,0.367472397644862,0.383381884072945,0,3.30347642998166,8.42736431362239,4.91540906419979,2.2420668914133,5.03182039813253,4.16730696445408,2.79182999001381,2.8138130501584,7.18151764551008,5.59794312399969,6.12198227436143,8.38797506213853,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,7.61230072230023,5.65506108396329,0,0,0,0,7.9389038884556,11.8950156732843,2.38743269014442,6.43149984711423,8.43861009190091,3.32460871295296,4.38051410282946,0.101839363850316,0,0,0.420883711772948,0.260240885925407,0.229902104433473,0,1.05493372485001,1.56483948048054,2.17793324484245,0.843315521037559,2.32833033665114,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.703578179943289,0.540186184383045,0,0,0,0,0,0,0,0,0,0,0,0,3.99550902271842,0.514523061896422,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.99259867206745,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,0,0,0,3.21321316421807,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.643011105094777,0.886701168211368,0.535106452806212,0.493647061806363,0,0,0,0.220528398054962,0,0,0,0,0,0,2.96680483216816,0,0.619160603889667,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,7.34177395402186,9.20650473014354,9.16632821503035,8.248952752497,11.6464028361009,13.5970901530146,8.10027000278167,8.55610286126019,8.15656336171568,8.80192529978094,0,0.798049746802062,0.170733605754134,0.486213434136588,0.209613162627982,0,0.666740183404846,0.412070114477788,0.320919209591815,1.51618327058278,1.52087579934144,0.565879024158229,0.655490552289177,1.08842759088278,0.804096565378586,0.476293691283074,0.579421629724277,0.77163688185482,1.23625770240992,0.883193520806384,1.37147700954166,1.06485483695602,0.953744759789284,0.436039249896986,0.752875043322645,1.09998990259179,1.09756783723664,1.31534855718921,0.950628796921032,1.68342681497322,0.474540072496697,0.29551344712669,2.04615521584845,1.08455788830176,0.385813221962283,0.749431733813838,0.935726433781634,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Cntn4 | |||
}} |
Revision as of 20:58, 4 August 2015
Short description: | p2@Cntn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cntn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000089208_5end |
EntrezGene: | 269784 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.83e-17 | 23 |
neuroblast (sensu Vertebrata) | 6.83e-17 | 23 |
neuron | 2.17e-10 | 33 |
neuronal stem cell | 2.17e-10 | 33 |
neuroblast | 2.17e-10 | 33 |
electrically signaling cell | 2.17e-10 | 33 |
electrically responsive cell | 3.97e-08 | 39 |
electrically active cell | 3.97e-08 | 39 |
neural cell | 5.50e-07 | 43 |
ectodermal cell | 9.80e-07 | 44 |
neurectodermal cell | 9.80e-07 | 44 |