FFCP PHASE1:Mm9::chr15:103333692..103333719,+: Difference between revisions
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{{FFCP|EntrezGene=18574|HGNC=|MCL_coexpression_id=90|UniProt=Q01065|association_with_transcript=-9bp_to_ENSMUST00000023132,NM_008800,uc007xyh.1_5end|description=CAGE_peak_3_at_Pde1b_5end|id=chr15:103333692..103333719,+|ontology_enrichment_celltype=CL:0000117!6.08e-16!23;CL:0000337!6.08e-16!23;CL:0000540!2.95e-15!33;CL:0000047!2.95e-15!33;CL:0000031!2.95e-15!33;CL:0000404!2.95e-15!33;CL:0002319!4.33e-12!43;CL:0000221!1.43e-11!44;CL:0000133!1.43e-11!44;CL:0000393!2.39e-11!39;CL:0000211!2.39e-11!39;CL:0000055!5.97e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.57e-22,23;CL:0000337,5.57e-22,23;CL:0000540,4.79e-17,33;CL:0000047,4.79e-17,33;CL:0000031,4.79e-17,33;CL:0000404,4.79e-17,33;CL:0000393,1.39e-13,39;CL:0000211,1.39e-13,39;CL:0002319,8.01e-12,43;CL:0000221,1.96e-11,44;CL:0000133,1.96e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.41e-31!73;UBERON:0005743!3.41e-31!73;UBERON:0000073!9.30e-30!75;UBERON:0001016!9.30e-30!75;UBERON:0002346!1.66e-29!71;UBERON:0003075!1.66e-29!71;UBERON:0007284!1.66e-29!71;UBERON:0004121!7.85e-28!102;UBERON:0000924!7.85e-28!102;UBERON:0006601!7.85e-28!102;UBERON:0000033!8.00e-28!63;UBERON:0001049!3.88e-25!52;UBERON:0005068!3.88e-25!52;UBERON:0006241!3.88e-25!52;UBERON:0007135!3.88e-25!52;UBERON:0000955!1.06e-23!50;UBERON:0006238!1.06e-23!50;UBERON:0003056!2.61e-23!49;UBERON:0002616!6.50e-23!49;UBERON:0002020!3.47e-22!34;UBERON:0002791!2.60e-18!29;UBERON:0003528!2.60e-18!29;UBERON:0001893!2.60e-18!29;UBERON:0003080!1.03e-17!40;UBERON:0002780!7.84e-17!39;UBERON:0001890!7.84e-17!39;UBERON:0006240!7.84e-17!39;UBERON:0007811!1.24e-16!86;UBERON:0000153!5.38e-15!94;UBERON:0000956!8.06e-12!21;UBERON:0001869!8.06e-12!21;UBERON:0000203!8.06e-12!21;UBERON:0002021!2.74e-10!10;UBERON:0000411!2.74e-10!10;UBERON:0001950!2.74e-10!10;UBERON:0002619!2.11e-09!17;UBERON:0003076!4.71e-08!12;UBERON:0003057!4.71e-08!12;UBERON:0002420!6.57e-08!8;UBERON:0007245!6.57e-08!8;UBERON:0010009!6.57e-08!8;UBERON:0010011!6.57e-08!8;UBERON:0000454!6.57e-08!8;UBERON:0002298!6.88e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.69e-36,73;UBERON:0000073,8.85e-36,54;UBERON:0002346,1.63e-35,64;UBERON:0003075,1.63e-35,64;UBERON:0007284,1.63e-35,64;UBERON:0001016,3.09e-35,75;UBERON:0004121,4.75e-33,95;UBERON:0000924,4.75e-33,95;UBERON:0006601,4.75e-33,95;UBERON:0001049,8.06e-33,52;UBERON:0005068,8.06e-33,52;UBERON:0006241,8.06e-33,52;UBERON:0007135,8.06e-33,52;UBERON:0002020,3.77e-32,34;UBERON:0010371,7.28e-30,73;UBERON:0000955,4.92e-26,47;UBERON:0006238,4.92e-26,47;UBERON:0003056,1.17e-25,49;UBERON:0003528,2.77e-25,29;UBERON:0002791,2.77e-25,29;UBERON:0001893,2.77e-25,29;UBERON:0002616,9.01e-25,46;UBERON:0003080,6.11e-23,40;UBERON:0010314,1.42e-21,92;UBERON:0002780,1.77e-21,39;UBERON:0001890,1.77e-21,39;UBERON:0006240,1.77e-21,39;UBERON:0002021,1.24e-17,10;UBERON:0000411,1.24e-17,10;UBERON:0001950,1.24e-17,10;UBERON:0000956,3.89e-14,21;UBERON:0001869,3.89e-14,21;UBERON:0000203,3.89e-14,21;UBERON:0002420,2.97e-13,8;UBERON:0007245,2.97e-13,8;UBERON:0010009,2.97e-13,8;UBERON:0010011,2.97e-13,8;UBERON:0000454,2.97e-13,8;UBERON:0002619,2.11e-11,17;UBERON:0003076,3.47e-10,12;UBERON:0003057,3.47e-10,12;UBERON:0000025,4.72e-10,114;UBERON:0002240,7.91e-10,6;UBERON:0005174,7.91e-10,6;UBERON:0001137,7.91e-10,6;UBERON:0004111,7.86e-09,122;UBERON:0000369,2.50e-08,5;UBERON:0002435,2.50e-08,5;UBERON:0000204,2.50e-08,5;UBERON:0010082,2.50e-08,5;UBERON:0002950,3.29e-08,4;UBERON:0001891,3.29e-08,4;UBERON:0009616,3.29e-08,4;UBERON:0010286,3.29e-08,4;UBERON:0001948,3.91e-08,5;UBERON:0002315,3.91e-08,5;UBERON:0011216,4.59e-07,194|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.63011399117477,4.23192783417626,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,1.24427534770173,1.08004750665353,0.210324961351382,2.85650984403804,3.53389665522582,0.857435594504678,0.766763768145891,0,6.60695285996332,9.19348834213351,9.5236050618871,2.1101806036831,2.01272815925301,1.04182674111352,10.6089539620525,10.1297269805702,5.80633341551878,4.12480019663135,2.42031857358475,1.67759501242771,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,1.67557365450764,0.255457055208591,0,0,0,9.8861822007183,157.837707972426,5.15182843662744,16.6871347384585,18.9229438424445,13.714010940931,37.3154905055843,0,0,0,0.841767423545896,0.260240885925407,0.689706313300419,0.900310649026746,1.50704817835715,1.08858398642125,1.66547836370305,1.12442069471675,1.55222022443409,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72927835405207,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.79358598925531,7.61875962849321,0,0,1.26203287766503,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,1.18586333383957,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0.120625849856312,0,0,0,10.0129663085675,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0.187682475451182,0,0,0,9.60078132449013,9.20650473014354,9.73922372846974,3.95262319390481,10.9613203163303,12.0863023582352,5.40018000185445,7.65546045481175,9.9691329976525,8.80192529978094,0.518936737920883,1.19707462020309,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.448176066834085,0.0574354689556133,1.42888107384922,0,0.192909220463705,0,0.294397840268795,0,0.70990322463735,0.476872379894642,0.436039249896986,0.470546902076653,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0.237270036248348,0.492522411877817,0,0.309873682371932,0.192906610981141,1.49886346762768,0.233931608445408,0,0,0,0.231867835620421|short_description=p3@Pde1b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18574 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q01065 | |||
|association_with_transcript=-9bp_to_ENSMUST00000023132,NM_008800,uc007xyh.1_5end | |||
|cluster_id=chr15:103333692..103333719,+ | |||
|description=CAGE_peak_3_at_Pde1b_5end | |||
|id=chr15:103333692..103333719,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.08e-16!23;CL:0000337!6.08e-16!23;CL:0000540!2.95e-15!33;CL:0000047!2.95e-15!33;CL:0000031!2.95e-15!33;CL:0000404!2.95e-15!33;CL:0002319!4.33e-12!43;CL:0000221!1.43e-11!44;CL:0000133!1.43e-11!44;CL:0000393!2.39e-11!39;CL:0000211!2.39e-11!39;CL:0000055!5.97e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.57e-22,23;CL:0000337,5.57e-22,23;CL:0000540,4.79e-17,33;CL:0000047,4.79e-17,33;CL:0000031,4.79e-17,33;CL:0000404,4.79e-17,33;CL:0000393,1.39e-13,39;CL:0000211,1.39e-13,39;CL:0002319,8.01e-12,43;CL:0000221,1.96e-11,44;CL:0000133,1.96e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.41e-31!73;UBERON:0005743!3.41e-31!73;UBERON:0000073!9.30e-30!75;UBERON:0001016!9.30e-30!75;UBERON:0002346!1.66e-29!71;UBERON:0003075!1.66e-29!71;UBERON:0007284!1.66e-29!71;UBERON:0004121!7.85e-28!102;UBERON:0000924!7.85e-28!102;UBERON:0006601!7.85e-28!102;UBERON:0000033!8.00e-28!63;UBERON:0001049!3.88e-25!52;UBERON:0005068!3.88e-25!52;UBERON:0006241!3.88e-25!52;UBERON:0007135!3.88e-25!52;UBERON:0000955!1.06e-23!50;UBERON:0006238!1.06e-23!50;UBERON:0003056!2.61e-23!49;UBERON:0002616!6.50e-23!49;UBERON:0002020!3.47e-22!34;UBERON:0002791!2.60e-18!29;UBERON:0003528!2.60e-18!29;UBERON:0001893!2.60e-18!29;UBERON:0003080!1.03e-17!40;UBERON:0002780!7.84e-17!39;UBERON:0001890!7.84e-17!39;UBERON:0006240!7.84e-17!39;UBERON:0007811!1.24e-16!86;UBERON:0000153!5.38e-15!94;UBERON:0000956!8.06e-12!21;UBERON:0001869!8.06e-12!21;UBERON:0000203!8.06e-12!21;UBERON:0002021!2.74e-10!10;UBERON:0000411!2.74e-10!10;UBERON:0001950!2.74e-10!10;UBERON:0002619!2.11e-09!17;UBERON:0003076!4.71e-08!12;UBERON:0003057!4.71e-08!12;UBERON:0002420!6.57e-08!8;UBERON:0007245!6.57e-08!8;UBERON:0010009!6.57e-08!8;UBERON:0010011!6.57e-08!8;UBERON:0000454!6.57e-08!8;UBERON:0002298!6.88e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.69e-36,73;UBERON:0000073,8.85e-36,54;UBERON:0002346,1.63e-35,64;UBERON:0003075,1.63e-35,64;UBERON:0007284,1.63e-35,64;UBERON:0001016,3.09e-35,75;UBERON:0004121,4.75e-33,95;UBERON:0000924,4.75e-33,95;UBERON:0006601,4.75e-33,95;UBERON:0001049,8.06e-33,52;UBERON:0005068,8.06e-33,52;UBERON:0006241,8.06e-33,52;UBERON:0007135,8.06e-33,52;UBERON:0002020,3.77e-32,34;UBERON:0010371,7.28e-30,73;UBERON:0000955,4.92e-26,47;UBERON:0006238,4.92e-26,47;UBERON:0003056,1.17e-25,49;UBERON:0003528,2.77e-25,29;UBERON:0002791,2.77e-25,29;UBERON:0001893,2.77e-25,29;UBERON:0002616,9.01e-25,46;UBERON:0003080,6.11e-23,40;UBERON:0010314,1.42e-21,92;UBERON:0002780,1.77e-21,39;UBERON:0001890,1.77e-21,39;UBERON:0006240,1.77e-21,39;UBERON:0002021,1.24e-17,10;UBERON:0000411,1.24e-17,10;UBERON:0001950,1.24e-17,10;UBERON:0000956,3.89e-14,21;UBERON:0001869,3.89e-14,21;UBERON:0000203,3.89e-14,21;UBERON:0002420,2.97e-13,8;UBERON:0007245,2.97e-13,8;UBERON:0010009,2.97e-13,8;UBERON:0010011,2.97e-13,8;UBERON:0000454,2.97e-13,8;UBERON:0002619,2.11e-11,17;UBERON:0003076,3.47e-10,12;UBERON:0003057,3.47e-10,12;UBERON:0000025,4.72e-10,114;UBERON:0002240,7.91e-10,6;UBERON:0005174,7.91e-10,6;UBERON:0001137,7.91e-10,6;UBERON:0004111,7.86e-09,122;UBERON:0000369,2.50e-08,5;UBERON:0002435,2.50e-08,5;UBERON:0000204,2.50e-08,5;UBERON:0010082,2.50e-08,5;UBERON:0002950,3.29e-08,4;UBERON:0001891,3.29e-08,4;UBERON:0009616,3.29e-08,4;UBERON:0010286,3.29e-08,4;UBERON:0001948,3.91e-08,5;UBERON:0002315,3.91e-08,5;UBERON:0011216,4.59e-07,194 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,2.63011399117477,4.23192783417626,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,1.24427534770173,1.08004750665353,0.210324961351382,2.85650984403804,3.53389665522582,0.857435594504678,0.766763768145891,0,6.60695285996332,9.19348834213351,9.5236050618871,2.1101806036831,2.01272815925301,1.04182674111352,10.6089539620525,10.1297269805702,5.80633341551878,4.12480019663135,2.42031857358475,1.67759501242771,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,1.67557365450764,0.255457055208591,0,0,0,9.8861822007183,157.837707972426,5.15182843662744,16.6871347384585,18.9229438424445,13.714010940931,37.3154905055843,0,0,0,0.841767423545896,0.260240885925407,0.689706313300419,0.900310649026746,1.50704817835715,1.08858398642125,1.66547836370305,1.12442069471675,1.55222022443409,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72927835405207,0.617427674275707,0,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.79358598925531,7.61875962849321,0,0,1.26203287766503,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,1.18586333383957,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0.120625849856312,0,0,0,10.0129663085675,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0.187682475451182,0,0,0,9.60078132449013,9.20650473014354,9.73922372846974,3.95262319390481,10.9613203163303,12.0863023582352,5.40018000185445,7.65546045481175,9.9691329976525,8.80192529978094,0.518936737920883,1.19707462020309,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.448176066834085,0.0574354689556133,1.42888107384922,0,0.192909220463705,0,0.294397840268795,0,0.70990322463735,0.476872379894642,0.436039249896986,0.470546902076653,0.25384382367503,0,0,0.271608227691724,0.561142271657738,0.237270036248348,0.492522411877817,0,0.309873682371932,0.192906610981141,1.49886346762768,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p3@Pde1b | |||
}} |
Revision as of 01:56, 5 August 2015
Short description: | p3@Pde1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pde1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -9bp_to_ENSMUST00000023132, NM_008800, uc007xyh.1_5end |
EntrezGene: | 18574 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.57e-22 | 23 |
neuroblast (sensu Vertebrata) | 5.57e-22 | 23 |
neuron | 4.79e-17 | 33 |
neuronal stem cell | 4.79e-17 | 33 |
neuroblast | 4.79e-17 | 33 |
electrically signaling cell | 4.79e-17 | 33 |
electrically responsive cell | 1.39e-13 | 39 |
electrically active cell | 1.39e-13 | 39 |
neural cell | 8.01e-12 | 43 |
ectodermal cell | 1.96e-11 | 44 |
neurectodermal cell | 1.96e-11 | 44 |