FFCP PHASE1:Mm9::chr9:46036430..46036457,+: Difference between revisions
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{{FFCP|EntrezGene=11806|HGNC=|MCL_coexpression_id=1611|UniProt=Q8BPD5|association_with_transcript=-205bp_to_ENSMUST00000034588_5end|description=CAGE_peak_4_at_Apoa1_5end|id=chr9:46036430..46036457,+|ontology_enrichment_celltype=CL:0000239!2.83e-09!6;CL:0000677!2.83e-09!6;CL:0000212!2.83e-09!6;CL:0000584!2.83e-09!6;CL:0000075!9.03e-08!7;CL:0000066!1.03e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,1.41e-16,25;CL:0000239,1.17e-13,6;CL:0000677,1.17e-13,6;CL:0000584,1.17e-13,6;CL:0000075,1.15e-11,7;CL:0000223,1.39e-11,20;CL:0000682,5.74e-11,3;CL:0000182,3.21e-10,5;CL:0002563,5.32e-09,9;CL:0002251,5.32e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.49e-13!43;UBERON:0000344!1.73e-12!15;UBERON:0001007!4.43e-12!128;UBERON:0001555!4.43e-12!128;UBERON:0007026!4.43e-12!128;UBERON:0004119!1.09e-11!130;UBERON:0000925!1.09e-11!130;UBERON:0006595!1.09e-11!130;UBERON:0004921!1.28e-10!126;UBERON:0004185!1.28e-10!126;UBERON:0005409!5.86e-10!59;UBERON:0001242!6.02e-10!13;UBERON:0000060!6.02e-10!13;UBERON:0001262!6.02e-10!13;UBERON:0004786!6.02e-10!13;UBERON:0003929!1.43e-08!55;UBERON:0004923!6.17e-08!24;UBERON:0002107!8.13e-08!22;UBERON:0007499!8.13e-08!22;UBERON:0006925!8.13e-08!22;UBERON:0009497!8.13e-08!22;UBERON:0000015!8.13e-08!22;UBERON:0002423!8.13e-08!22;UBERON:0006235!8.13e-08!22;UBERON:0008835!8.13e-08!22;UBERON:0003894!8.13e-08!22;UBERON:0004161!8.13e-08!22;UBERON:0008836!8.13e-08!22;UBERON:0009854!2.50e-07!23;UBERON:0009856!2.50e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.30e-22,31;UBERON:0000344,7.79e-20,15;UBERON:0001242,1.27e-14,13;UBERON:0001262,1.27e-14,13;UBERON:0004786,1.27e-14,13;UBERON:0004923,2.08e-14,24;UBERON:0005409,1.57e-13,47;UBERON:0001007,8.50e-11,116;UBERON:0001555,8.50e-11,116;UBERON:0007026,8.50e-11,116;UBERON:0004119,1.56e-10,118;UBERON:0000925,1.56e-10,118;UBERON:0006595,1.56e-10,118;UBERON:0003350,5.32e-09,9;UBERON:0004808,5.32e-09,9;UBERON:0001277,5.32e-09,9;UBERON:0004921,1.05e-08,114;UBERON:0001962,1.08e-07,2;UBERON:0001961,1.08e-07,2;UBERON:0001744,1.08e-07,2;UBERON:0002108,2.64e-07,4;UBERON:0000485,2.66e-07,11|phase1_expression=0,33.850614541018,36.3999391511629,0.90739263392049,2.00358291978539,7.38668796412315,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1590452719692,21.1056538581796,33.3054539186712,31.4456257196125,23.4863643627619,0.380046838912748,1.51218077855958,7.98229838359097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,4.75979933595425,4.31762553310254,3.24888208723835,2.24013443548668,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0.117588707135705,0,50.922163353281,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,2.31293148088659,3.70230793328962,0,0,0,0.80673409849337,0.667134131534611,1.52180500890047,0.474529061544512,3.29397909448022,0.251335208800269,1.59165177632921,1.16978452271472,0,0.432276099749388,2.98711909881551,0,0,0,0,0,0,0.0632365371242573,0,0,0,1.48226313543574,0,0,0,0,0,0,0.575392274901621,0.486405680325106,0,2.87536413054709,0,0.312037673114561,0.757736633841335,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.292373642219257,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.377252682772152,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p4@Apoa1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11806 | |||
|HGNC= | |||
|MCL_coexpression_id=1611 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BPD5 | |||
|association_with_transcript=-205bp_to_ENSMUST00000034588_5end | |||
|cluster_id=chr9:46036430..46036457,+ | |||
|description=CAGE_peak_4_at_Apoa1_5end | |||
|id=chr9:46036430..46036457,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.83e-09!6;CL:0000677!2.83e-09!6;CL:0000212!2.83e-09!6;CL:0000584!2.83e-09!6;CL:0000075!9.03e-08!7;CL:0000066!1.03e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.41e-16,25;CL:0000239,1.17e-13,6;CL:0000677,1.17e-13,6;CL:0000584,1.17e-13,6;CL:0000075,1.15e-11,7;CL:0000223,1.39e-11,20;CL:0000682,5.74e-11,3;CL:0000182,3.21e-10,5;CL:0002563,5.32e-09,9;CL:0002251,5.32e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.49e-13!43;UBERON:0000344!1.73e-12!15;UBERON:0001007!4.43e-12!128;UBERON:0001555!4.43e-12!128;UBERON:0007026!4.43e-12!128;UBERON:0004119!1.09e-11!130;UBERON:0000925!1.09e-11!130;UBERON:0006595!1.09e-11!130;UBERON:0004921!1.28e-10!126;UBERON:0004185!1.28e-10!126;UBERON:0005409!5.86e-10!59;UBERON:0001242!6.02e-10!13;UBERON:0000060!6.02e-10!13;UBERON:0001262!6.02e-10!13;UBERON:0004786!6.02e-10!13;UBERON:0003929!1.43e-08!55;UBERON:0004923!6.17e-08!24;UBERON:0002107!8.13e-08!22;UBERON:0007499!8.13e-08!22;UBERON:0006925!8.13e-08!22;UBERON:0009497!8.13e-08!22;UBERON:0000015!8.13e-08!22;UBERON:0002423!8.13e-08!22;UBERON:0006235!8.13e-08!22;UBERON:0008835!8.13e-08!22;UBERON:0003894!8.13e-08!22;UBERON:0004161!8.13e-08!22;UBERON:0008836!8.13e-08!22;UBERON:0009854!2.50e-07!23;UBERON:0009856!2.50e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.30e-22,31;UBERON:0000344,7.79e-20,15;UBERON:0001242,1.27e-14,13;UBERON:0001262,1.27e-14,13;UBERON:0004786,1.27e-14,13;UBERON:0004923,2.08e-14,24;UBERON:0005409,1.57e-13,47;UBERON:0001007,8.50e-11,116;UBERON:0001555,8.50e-11,116;UBERON:0007026,8.50e-11,116;UBERON:0004119,1.56e-10,118;UBERON:0000925,1.56e-10,118;UBERON:0006595,1.56e-10,118;UBERON:0003350,5.32e-09,9;UBERON:0004808,5.32e-09,9;UBERON:0001277,5.32e-09,9;UBERON:0004921,1.05e-08,114;UBERON:0001962,1.08e-07,2;UBERON:0001961,1.08e-07,2;UBERON:0001744,1.08e-07,2;UBERON:0002108,2.64e-07,4;UBERON:0000485,2.66e-07,11 | |||
|phase1_expression=0,33.850614541018,36.3999391511629,0.90739263392049,2.00358291978539,7.38668796412315,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1590452719692,21.1056538581796,33.3054539186712,31.4456257196125,23.4863643627619,0.380046838912748,1.51218077855958,7.98229838359097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,4.75979933595425,4.31762553310254,3.24888208723835,2.24013443548668,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.7127581957859,0,0,0,0,0,0,0.117588707135705,0,50.922163353281,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,2.31293148088659,3.70230793328962,0,0,0,0.80673409849337,0.667134131534611,1.52180500890047,0.474529061544512,3.29397909448022,0.251335208800269,1.59165177632921,1.16978452271472,0,0.432276099749388,2.98711909881551,0,0,0,0,0,0,0.0632365371242573,0,0,0,1.48226313543574,0,0,0,0,0,0,0.575392274901621,0.486405680325106,0,2.87536413054709,0,0.312037673114561,0.757736633841335,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.292373642219257,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.377252682772152,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p4@Apoa1 | |||
}} |
Revision as of 05:20, 5 August 2015
Short description: | p4@Apoa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Apoa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1611 |
Association with transcript: | -205bp_to_ENSMUST00000034588_5end |
EntrezGene: | 11806 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.41e-16 | 25 |
brush border epithelial cell | 1.17e-13 | 6 |
gut absorptive cell | 1.17e-13 | 6 |
enterocyte | 1.17e-13 | 6 |
columnar/cuboidal epithelial cell | 1.15e-11 | 7 |
endodermal cell | 1.39e-11 | 20 |
M cell of gut | 5.74e-11 | 3 |
hepatocyte | 3.21e-10 | 5 |
intestinal epithelial cell | 5.32e-09 | 9 |
epithelial cell of alimentary canal | 5.32e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.30e-22 | 31 |
mucosa | 7.79e-20 | 15 |
intestinal mucosa | 1.27e-14 | 13 |
wall of intestine | 1.27e-14 | 13 |
gastrointestinal system mucosa | 1.27e-14 | 13 |
organ component layer | 2.08e-14 | 24 |
gastrointestinal system | 1.57e-13 | 47 |
digestive system | 8.50e-11 | 116 |
digestive tract | 8.50e-11 | 116 |
primitive gut | 8.50e-11 | 116 |
endoderm-derived structure | 1.56e-10 | 118 |
endoderm | 1.56e-10 | 118 |
presumptive endoderm | 1.56e-10 | 118 |
epithelium of mucosa | 5.32e-09 | 9 |
gastrointestinal system epithelium | 5.32e-09 | 9 |
intestinal epithelium | 5.32e-09 | 9 |
subdivision of digestive tract | 1.05e-08 | 114 |
gut-associated lymphoid tissue | 1.08e-07 | 2 |
mucosa-associated lymphoid tissue | 1.08e-07 | 2 |
lymphoid tissue | 1.08e-07 | 2 |
small intestine | 2.64e-07 | 4 |
simple columnar epithelium | 2.66e-07 | 11 |