FFCP PHASE1:Mm9::chr7:51684213..51684237,+: Difference between revisions
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{{FFCP|EntrezGene=272381|HGNC=|MCL_coexpression_id=747|UniProt=D3YZP3|association_with_transcript=-150bp_to_ENSMUST00000127790_5end|description=CAGE_peak_6_at_Lrrc4b_5end|id=chr7:51684213..51684237,+|ontology_enrichment_celltype=CL:0000117!8.87e-19!23;CL:0000337!8.87e-19!23;CL:0000221!2.59e-16!44;CL:0000133!2.59e-16!44;CL:0002319!4.20e-16!43;CL:0000540!5.06e-14!33;CL:0000047!5.06e-14!33;CL:0000031!5.06e-14!33;CL:0000404!5.06e-14!33;CL:0000055!7.28e-12!50;CL:0000393!3.90e-10!39;CL:0000211!3.90e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-31,23;CL:0000337,1.26e-31,23;CL:0002319,1.93e-26,43;CL:0000221,1.26e-25,44;CL:0000133,1.26e-25,44;CL:0000540,1.52e-21,33;CL:0000047,1.52e-21,33;CL:0000031,1.52e-21,33;CL:0000404,1.52e-21,33;CL:0000393,4.30e-17,39;CL:0000211,4.30e-17,39;CL:0002321,1.01e-12,70;CL:0002453,1.61e-07,8;CL:0002609,2.27e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.16e-37!73;UBERON:0005743!4.16e-37!73;UBERON:0000073!2.38e-35!75;UBERON:0001016!2.38e-35!75;UBERON:0001049!1.92e-31!52;UBERON:0005068!1.92e-31!52;UBERON:0006241!1.92e-31!52;UBERON:0007135!1.92e-31!52;UBERON:0002346!1.95e-31!71;UBERON:0003075!1.95e-31!71;UBERON:0007284!1.95e-31!71;UBERON:0000033!1.11e-30!63;UBERON:0004121!2.91e-30!102;UBERON:0000924!2.91e-30!102;UBERON:0006601!2.91e-30!102;UBERON:0000955!2.47e-29!50;UBERON:0006238!2.47e-29!50;UBERON:0002616!1.64e-28!49;UBERON:0003056!2.22e-25!49;UBERON:0002020!4.72e-25!34;UBERON:0003080!3.05e-23!40;UBERON:0002780!2.38e-22!39;UBERON:0001890!2.38e-22!39;UBERON:0006240!2.38e-22!39;UBERON:0002791!1.84e-20!29;UBERON:0003528!1.84e-20!29;UBERON:0001893!1.84e-20!29;UBERON:0007811!1.92e-17!86;UBERON:0000153!5.62e-16!94;UBERON:0000956!2.27e-14!21;UBERON:0001869!2.27e-14!21;UBERON:0000203!2.27e-14!21;UBERON:0002619!4.79e-12!17;UBERON:0003076!1.72e-08!12;UBERON:0003057!1.72e-08!12;UBERON:0002021!5.67e-08!10;UBERON:0000411!5.67e-08!10;UBERON:0001950!5.67e-08!10;UBERON:0002420!2.77e-07!8;UBERON:0007245!2.77e-07!8;UBERON:0010009!2.77e-07!8;UBERON:0010011!2.77e-07!8;UBERON:0000454!2.77e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-53,73;UBERON:0001016,6.75e-52,75;UBERON:0000073,1.33e-48,54;UBERON:0001049,2.02e-45,52;UBERON:0005068,2.02e-45,52;UBERON:0006241,2.02e-45,52;UBERON:0007135,2.02e-45,52;UBERON:0002020,1.25e-42,34;UBERON:0004121,2.00e-39,95;UBERON:0000924,2.00e-39,95;UBERON:0006601,2.00e-39,95;UBERON:0000955,2.54e-37,47;UBERON:0006238,2.54e-37,47;UBERON:0002346,3.20e-36,64;UBERON:0003075,3.20e-36,64;UBERON:0007284,3.20e-36,64;UBERON:0002616,5.62e-36,46;UBERON:0003528,1.41e-34,29;UBERON:0002791,1.41e-34,29;UBERON:0001893,1.41e-34,29;UBERON:0010371,1.04e-31,73;UBERON:0003080,4.48e-31,40;UBERON:0002780,1.31e-29,39;UBERON:0001890,1.31e-29,39;UBERON:0006240,1.31e-29,39;UBERON:0003056,4.02e-25,49;UBERON:0000956,6.60e-24,21;UBERON:0001869,6.60e-24,21;UBERON:0000203,6.60e-24,21;UBERON:0010314,1.59e-22,92;UBERON:0002619,7.64e-20,17;UBERON:0003076,3.70e-14,12;UBERON:0003057,3.70e-14,12;UBERON:0000025,5.08e-14,114;UBERON:0004111,4.05e-13,122;UBERON:0002021,9.62e-13,10;UBERON:0000411,9.62e-13,10;UBERON:0001950,9.62e-13,10;UBERON:0002420,1.52e-11,8;UBERON:0007245,1.52e-11,8;UBERON:0010009,1.52e-11,8;UBERON:0010011,1.52e-11,8;UBERON:0000454,1.52e-11,8;UBERON:0011216,3.84e-11,194;UBERON:0002240,2.00e-10,6;UBERON:0005174,2.00e-10,6;UBERON:0001137,2.00e-10,6;UBERON:0001948,5.47e-09,5;UBERON:0002315,5.47e-09,5;UBERON:0001954,1.67e-08,7;UBERON:0003022,1.67e-08,7;UBERON:0002421,1.67e-08,7;UBERON:0000349,1.67e-08,7;UBERON:0002600,1.67e-08,7;UBERON:0000369,9.91e-08,5;UBERON:0002435,9.91e-08,5;UBERON:0000204,9.91e-08,5;UBERON:0010082,9.91e-08,5;UBERON:0002950,7.84e-07,4;UBERON:0001891,7.84e-07,4;UBERON:0009616,7.84e-07,4;UBERON:0010286,7.84e-07,4|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,3.29529274101708,2.3331587888914,1.1198913730029,2.87505128729943,0,0,0,0,0,0,9.3065571995415,10.0508286061686,7.60597684207415,0,0,0,0,0,6.5912024314049,17.6740420447915,2.48855069540346,2.97013064329719,3.99617426567626,13.9968982357864,9.49734726091938,5.51208596467293,4.60058260887535,1.83843757322004,11.0115880999389,8.17198963745201,7.52672012955593,9.75958529203434,7.22752384459036,5.2091337055676,15.0758819460746,6.75315132038016,3.97275444219706,11.7851434189467,8.96941589034349,8.01517617048792,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,4.68449275218475,1.46612694769419,0,0,0,0,9.13722900369418,5.49000723382352,5.52879149296603,5.04090528557602,4.09144731728529,6.85700547046548,6.65189178577806,0.203678727700633,0,0,0.210441855886474,0.520481771850815,0.459804208866946,0.540186389416048,0.60281927134286,0.0680364991513279,0.12811372028485,1.3118241438362,0.517406741478031,0.431135985865684,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,5.67782861123144,3.91037527041281,0,0,0,0,0.38660238396628,0,0.444756087689741,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,7.22477654945064,6.21221938938677,0,0,0.631016438832513,0,0.430846795465598,0,0,0,0,0,0.395287777946524,6.42642632843614,0,1.24645922567079,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,1.03486947026204,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.187682475451182,0,0.214368379079066,0,6.7770221114048,7.82552902062201,6.30185064783336,3.43706364687375,5.48066015816514,2.2661816921691,5.40018000185445,3.60256962579376,5.89085131679466,5.69536342927002,0.207574695168353,1.59609949360412,1.70733605754134,0.972426868273176,0.838452650511929,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.758091635291392,0.25347929989024,1.88626341386076,0.468207537349412,0.640251524048693,0.976402972245426,0.476293691283074,0.811190281613988,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0,0.953744759789284,1.16277133305863,0.470546902076653,0.930760686808441,0.548783918618318,0.789209134313529,0.814824683075171,0,0.593175090620871,1.18205378850676,0.409231043169689,0.77468420592983,0.578719832943424,3.74715866906919,0.233931608445408,1.50409737833809,0.57386499620653,0,0.231867835620421|short_description=p6@Lrrc4b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:272381 | |||
|HGNC= | |||
|MCL_coexpression_id=747 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YZP3 | |||
|association_with_transcript=-150bp_to_ENSMUST00000127790_5end | |||
|cluster_id=chr7:51684213..51684237,+ | |||
|description=CAGE_peak_6_at_Lrrc4b_5end | |||
|id=chr7:51684213..51684237,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.87e-19!23;CL:0000337!8.87e-19!23;CL:0000221!2.59e-16!44;CL:0000133!2.59e-16!44;CL:0002319!4.20e-16!43;CL:0000540!5.06e-14!33;CL:0000047!5.06e-14!33;CL:0000031!5.06e-14!33;CL:0000404!5.06e-14!33;CL:0000055!7.28e-12!50;CL:0000393!3.90e-10!39;CL:0000211!3.90e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-31,23;CL:0000337,1.26e-31,23;CL:0002319,1.93e-26,43;CL:0000221,1.26e-25,44;CL:0000133,1.26e-25,44;CL:0000540,1.52e-21,33;CL:0000047,1.52e-21,33;CL:0000031,1.52e-21,33;CL:0000404,1.52e-21,33;CL:0000393,4.30e-17,39;CL:0000211,4.30e-17,39;CL:0002321,1.01e-12,70;CL:0002453,1.61e-07,8;CL:0002609,2.27e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.16e-37!73;UBERON:0005743!4.16e-37!73;UBERON:0000073!2.38e-35!75;UBERON:0001016!2.38e-35!75;UBERON:0001049!1.92e-31!52;UBERON:0005068!1.92e-31!52;UBERON:0006241!1.92e-31!52;UBERON:0007135!1.92e-31!52;UBERON:0002346!1.95e-31!71;UBERON:0003075!1.95e-31!71;UBERON:0007284!1.95e-31!71;UBERON:0000033!1.11e-30!63;UBERON:0004121!2.91e-30!102;UBERON:0000924!2.91e-30!102;UBERON:0006601!2.91e-30!102;UBERON:0000955!2.47e-29!50;UBERON:0006238!2.47e-29!50;UBERON:0002616!1.64e-28!49;UBERON:0003056!2.22e-25!49;UBERON:0002020!4.72e-25!34;UBERON:0003080!3.05e-23!40;UBERON:0002780!2.38e-22!39;UBERON:0001890!2.38e-22!39;UBERON:0006240!2.38e-22!39;UBERON:0002791!1.84e-20!29;UBERON:0003528!1.84e-20!29;UBERON:0001893!1.84e-20!29;UBERON:0007811!1.92e-17!86;UBERON:0000153!5.62e-16!94;UBERON:0000956!2.27e-14!21;UBERON:0001869!2.27e-14!21;UBERON:0000203!2.27e-14!21;UBERON:0002619!4.79e-12!17;UBERON:0003076!1.72e-08!12;UBERON:0003057!1.72e-08!12;UBERON:0002021!5.67e-08!10;UBERON:0000411!5.67e-08!10;UBERON:0001950!5.67e-08!10;UBERON:0002420!2.77e-07!8;UBERON:0007245!2.77e-07!8;UBERON:0010009!2.77e-07!8;UBERON:0010011!2.77e-07!8;UBERON:0000454!2.77e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-53,73;UBERON:0001016,6.75e-52,75;UBERON:0000073,1.33e-48,54;UBERON:0001049,2.02e-45,52;UBERON:0005068,2.02e-45,52;UBERON:0006241,2.02e-45,52;UBERON:0007135,2.02e-45,52;UBERON:0002020,1.25e-42,34;UBERON:0004121,2.00e-39,95;UBERON:0000924,2.00e-39,95;UBERON:0006601,2.00e-39,95;UBERON:0000955,2.54e-37,47;UBERON:0006238,2.54e-37,47;UBERON:0002346,3.20e-36,64;UBERON:0003075,3.20e-36,64;UBERON:0007284,3.20e-36,64;UBERON:0002616,5.62e-36,46;UBERON:0003528,1.41e-34,29;UBERON:0002791,1.41e-34,29;UBERON:0001893,1.41e-34,29;UBERON:0010371,1.04e-31,73;UBERON:0003080,4.48e-31,40;UBERON:0002780,1.31e-29,39;UBERON:0001890,1.31e-29,39;UBERON:0006240,1.31e-29,39;UBERON:0003056,4.02e-25,49;UBERON:0000956,6.60e-24,21;UBERON:0001869,6.60e-24,21;UBERON:0000203,6.60e-24,21;UBERON:0010314,1.59e-22,92;UBERON:0002619,7.64e-20,17;UBERON:0003076,3.70e-14,12;UBERON:0003057,3.70e-14,12;UBERON:0000025,5.08e-14,114;UBERON:0004111,4.05e-13,122;UBERON:0002021,9.62e-13,10;UBERON:0000411,9.62e-13,10;UBERON:0001950,9.62e-13,10;UBERON:0002420,1.52e-11,8;UBERON:0007245,1.52e-11,8;UBERON:0010009,1.52e-11,8;UBERON:0010011,1.52e-11,8;UBERON:0000454,1.52e-11,8;UBERON:0011216,3.84e-11,194;UBERON:0002240,2.00e-10,6;UBERON:0005174,2.00e-10,6;UBERON:0001137,2.00e-10,6;UBERON:0001948,5.47e-09,5;UBERON:0002315,5.47e-09,5;UBERON:0001954,1.67e-08,7;UBERON:0003022,1.67e-08,7;UBERON:0002421,1.67e-08,7;UBERON:0000349,1.67e-08,7;UBERON:0002600,1.67e-08,7;UBERON:0000369,9.91e-08,5;UBERON:0002435,9.91e-08,5;UBERON:0000204,9.91e-08,5;UBERON:0010082,9.91e-08,5;UBERON:0002950,7.84e-07,4;UBERON:0001891,7.84e-07,4;UBERON:0009616,7.84e-07,4;UBERON:0010286,7.84e-07,4 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,3.29529274101708,2.3331587888914,1.1198913730029,2.87505128729943,0,0,0,0,0,0,9.3065571995415,10.0508286061686,7.60597684207415,0,0,0,0,0,6.5912024314049,17.6740420447915,2.48855069540346,2.97013064329719,3.99617426567626,13.9968982357864,9.49734726091938,5.51208596467293,4.60058260887535,1.83843757322004,11.0115880999389,8.17198963745201,7.52672012955593,9.75958529203434,7.22752384459036,5.2091337055676,15.0758819460746,6.75315132038016,3.97275444219706,11.7851434189467,8.96941589034349,8.01517617048792,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,4.68449275218475,1.46612694769419,0,0,0,0,9.13722900369418,5.49000723382352,5.52879149296603,5.04090528557602,4.09144731728529,6.85700547046548,6.65189178577806,0.203678727700633,0,0,0.210441855886474,0.520481771850815,0.459804208866946,0.540186389416048,0.60281927134286,0.0680364991513279,0.12811372028485,1.3118241438362,0.517406741478031,0.431135985865684,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,5.67782861123144,3.91037527041281,0,0,0,0,0.38660238396628,0,0.444756087689741,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,7.22477654945064,6.21221938938677,0,0,0.631016438832513,0,0.430846795465598,0,0,0,0,0,0.395287777946524,6.42642632843614,0,1.24645922567079,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,1.03486947026204,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.187682475451182,0,0.214368379079066,0,6.7770221114048,7.82552902062201,6.30185064783336,3.43706364687375,5.48066015816514,2.2661816921691,5.40018000185445,3.60256962579376,5.89085131679466,5.69536342927002,0.207574695168353,1.59609949360412,1.70733605754134,0.972426868273176,0.838452650511929,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.758091635291392,0.25347929989024,1.88626341386076,0.468207537349412,0.640251524048693,0.976402972245426,0.476293691283074,0.811190281613988,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0,0.953744759789284,1.16277133305863,0.470546902076653,0.930760686808441,0.548783918618318,0.789209134313529,0.814824683075171,0,0.593175090620871,1.18205378850676,0.409231043169689,0.77468420592983,0.578719832943424,3.74715866906919,0.233931608445408,1.50409737833809,0.57386499620653,0,0.231867835620421 | |||
|short_description=p6@Lrrc4b | |||
}} |
Revision as of 06:18, 5 August 2015
Short description: | p6@Lrrc4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lrrc4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:747 |
Association with transcript: | -150bp_to_ENSMUST00000127790_5end |
EntrezGene: | 272381 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.26e-31 | 23 |
neuroblast (sensu Vertebrata) | 1.26e-31 | 23 |
neural cell | 1.93e-26 | 43 |
ectodermal cell | 1.26e-25 | 44 |
neurectodermal cell | 1.26e-25 | 44 |
neuron | 1.52e-21 | 33 |
neuronal stem cell | 1.52e-21 | 33 |
neuroblast | 1.52e-21 | 33 |
electrically signaling cell | 1.52e-21 | 33 |
electrically responsive cell | 4.30e-17 | 39 |
electrically active cell | 4.30e-17 | 39 |
embryonic cell | 1.01e-12 | 70 |
oligodendrocyte precursor cell | 1.61e-07 | 8 |
neuron of cerebral cortex | 2.27e-07 | 6 |