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FFCP PHASE1:Mm9::chr9:49315006..49315036,-: Difference between revisions

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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=393|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:49315006..49315036,-|id=chr9:49315006..49315036,-|ontology_enrichment_celltype=CL:0000117!1.49e-16!23;CL:0000337!1.49e-16!23;CL:0000540!2.59e-14!33;CL:0000047!2.59e-14!33;CL:0000031!2.59e-14!33;CL:0000404!2.59e-14!33;CL:0000393!3.15e-10!39;CL:0000211!3.15e-10!39;CL:0002319!3.14e-08!43;CL:0000221!8.46e-08!44;CL:0000133!8.46e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.46e-33,23;CL:0000337,2.46e-33,23;CL:0000540,3.14e-21,33;CL:0000047,3.14e-21,33;CL:0000031,3.14e-21,33;CL:0000404,3.14e-21,33;CL:0000393,5.69e-17,39;CL:0000211,5.69e-17,39;CL:0002319,8.37e-15,43;CL:0000221,2.52e-14,44;CL:0000133,2.52e-14,44;CL:0002609,1.77e-09,6;CL:0002321,8.13e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.77e-28!71;UBERON:0003075!1.77e-28!71;UBERON:0007284!1.77e-28!71;UBERON:0001017!3.74e-23!73;UBERON:0005743!3.74e-23!73;UBERON:0001049!8.69e-23!52;UBERON:0005068!8.69e-23!52;UBERON:0006241!8.69e-23!52;UBERON:0007135!8.69e-23!52;UBERON:0003056!3.18e-22!49;UBERON:0004121!3.67e-22!102;UBERON:0000924!3.67e-22!102;UBERON:0006601!3.67e-22!102;UBERON:0000073!7.37e-22!75;UBERON:0001016!7.37e-22!75;UBERON:0000033!3.64e-21!63;UBERON:0002020!5.26e-20!34;UBERON:0000955!9.42e-20!50;UBERON:0006238!9.42e-20!50;UBERON:0002616!5.14e-19!49;UBERON:0003080!5.66e-18!40;UBERON:0002780!2.58e-17!39;UBERON:0001890!2.58e-17!39;UBERON:0006240!2.58e-17!39;UBERON:0002791!5.31e-16!29;UBERON:0003528!5.31e-16!29;UBERON:0001893!5.31e-16!29;UBERON:0000956!4.16e-10!21;UBERON:0001869!4.16e-10!21;UBERON:0000203!4.16e-10!21;UBERON:0007811!5.38e-10!86;UBERON:0000153!7.73e-09!94;UBERON:0002619!5.63e-08!17;UBERON:0002420!2.04e-07!8;UBERON:0007245!2.04e-07!8;UBERON:0010009!2.04e-07!8;UBERON:0010011!2.04e-07!8;UBERON:0000454!2.04e-07!8;UBERON:0002021!4.32e-07!10;UBERON:0000411!4.32e-07!10;UBERON:0001950!4.32e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.24e-31,34;UBERON:0002346,3.44e-29,64;UBERON:0003075,3.44e-29,64;UBERON:0007284,3.44e-29,64;UBERON:0000073,8.63e-29,54;UBERON:0001049,1.06e-27,52;UBERON:0005068,1.06e-27,52;UBERON:0006241,1.06e-27,52;UBERON:0007135,1.06e-27,52;UBERON:0001017,5.20e-27,73;UBERON:0001016,5.22e-26,75;UBERON:0004121,4.76e-25,95;UBERON:0000924,4.76e-25,95;UBERON:0006601,4.76e-25,95;UBERON:0010371,2.51e-24,73;UBERON:0003056,1.04e-23,49;UBERON:0003528,1.41e-23,29;UBERON:0002791,1.41e-23,29;UBERON:0001893,1.41e-23,29;UBERON:0000955,3.83e-21,47;UBERON:0006238,3.83e-21,47;UBERON:0010314,7.80e-21,92;UBERON:0003080,1.48e-20,40;UBERON:0002616,6.73e-20,46;UBERON:0002780,2.15e-19,39;UBERON:0001890,2.15e-19,39;UBERON:0006240,2.15e-19,39;UBERON:0002420,1.22e-13,8;UBERON:0007245,1.22e-13,8;UBERON:0010009,1.22e-13,8;UBERON:0010011,1.22e-13,8;UBERON:0000454,1.22e-13,8;UBERON:0000956,1.80e-12,21;UBERON:0001869,1.80e-12,21;UBERON:0000203,1.80e-12,21;UBERON:0002240,2.59e-10,6;UBERON:0005174,2.59e-10,6;UBERON:0001137,2.59e-10,6;UBERON:0000369,1.13e-09,5;UBERON:0002435,1.13e-09,5;UBERON:0000204,1.13e-09,5;UBERON:0010082,1.13e-09,5;UBERON:0002619,1.45e-09,17;UBERON:0001948,1.97e-09,5;UBERON:0002315,1.97e-09,5;UBERON:0000025,7.12e-08,114;UBERON:0003076,1.34e-07,12;UBERON:0003057,1.34e-07,12;UBERON:0002021,3.26e-07,10;UBERON:0000411,3.26e-07,10;UBERON:0001950,3.26e-07,10;UBERON:0004111,7.85e-07,122;UBERON:0002950,7.93e-07,4;UBERON:0001891,7.93e-07,4;UBERON:0009616,7.93e-07,4;UBERON:0010286,7.93e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27181028664753,12.1667925232568,5.07065122804943,0,0,0,0,0,0,0,2.69592992002042,2.29510095163874,2.3135745748652,2.85650984403804,1.76694832761291,1.71487118900936,1.43768206527355,1.83843757322004,0,2.80912143787413,3.22573719838111,6.85808696197008,9.33173964744578,7.8137005583514,1.95428099300967,1.68828783009504,2.44477196442896,9.1334861496837,7.97281412474976,6.52398060388552,0,0,0,0,0,0,0,0,0,0.340860645156116,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0.346970653532272,1.21786191324856,0.691846491768175,1.80867168663147,1.41106448562846,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,1.79748767285787,1.83000241127451,6.91098936620754,0.347648640384553,1.53429274398198,1.66230435647648,1.94689515681309,0.203678727700633,0.124406970610093,0,0.210441855886474,1.30120442962704,0.229902104433473,0.720248519221397,1.65775299619287,1.42876648217788,2.562274405697,0.655912071918102,4.65666067330228,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0,0,0,0,0,0,0.420579897128254,8.43817821510132,0,0,1.06644125267617,0.696710015581316,0.257734922644187,0.605050573870028,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0,1.79763881730844,0,0,0.379335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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=393
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr9:49315006..49315036,-
|description=CAGE_peak_at_chr9:49315006..49315036,-
|id=chr9:49315006..49315036,-
|ontology_enrichment_celltype=CL:0000117!1.49e-16!23;CL:0000337!1.49e-16!23;CL:0000540!2.59e-14!33;CL:0000047!2.59e-14!33;CL:0000031!2.59e-14!33;CL:0000404!2.59e-14!33;CL:0000393!3.15e-10!39;CL:0000211!3.15e-10!39;CL:0002319!3.14e-08!43;CL:0000221!8.46e-08!44;CL:0000133!8.46e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,2.46e-33,23;CL:0000337,2.46e-33,23;CL:0000540,3.14e-21,33;CL:0000047,3.14e-21,33;CL:0000031,3.14e-21,33;CL:0000404,3.14e-21,33;CL:0000393,5.69e-17,39;CL:0000211,5.69e-17,39;CL:0002319,8.37e-15,43;CL:0000221,2.52e-14,44;CL:0000133,2.52e-14,44;CL:0002609,1.77e-09,6;CL:0002321,8.13e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.24e-31,34;UBERON:0002346,3.44e-29,64;UBERON:0003075,3.44e-29,64;UBERON:0007284,3.44e-29,64;UBERON:0000073,8.63e-29,54;UBERON:0001049,1.06e-27,52;UBERON:0005068,1.06e-27,52;UBERON:0006241,1.06e-27,52;UBERON:0007135,1.06e-27,52;UBERON:0001017,5.20e-27,73;UBERON:0001016,5.22e-26,75;UBERON:0004121,4.76e-25,95;UBERON:0000924,4.76e-25,95;UBERON:0006601,4.76e-25,95;UBERON:0010371,2.51e-24,73;UBERON:0003056,1.04e-23,49;UBERON:0003528,1.41e-23,29;UBERON:0002791,1.41e-23,29;UBERON:0001893,1.41e-23,29;UBERON:0000955,3.83e-21,47;UBERON:0006238,3.83e-21,47;UBERON:0010314,7.80e-21,92;UBERON:0003080,1.48e-20,40;UBERON:0002616,6.73e-20,46;UBERON:0002780,2.15e-19,39;UBERON:0001890,2.15e-19,39;UBERON:0006240,2.15e-19,39;UBERON:0002420,1.22e-13,8;UBERON:0007245,1.22e-13,8;UBERON:0010009,1.22e-13,8;UBERON:0010011,1.22e-13,8;UBERON:0000454,1.22e-13,8;UBERON:0000956,1.80e-12,21;UBERON:0001869,1.80e-12,21;UBERON:0000203,1.80e-12,21;UBERON:0002240,2.59e-10,6;UBERON:0005174,2.59e-10,6;UBERON:0001137,2.59e-10,6;UBERON:0000369,1.13e-09,5;UBERON:0002435,1.13e-09,5;UBERON:0000204,1.13e-09,5;UBERON:0010082,1.13e-09,5;UBERON:0002619,1.45e-09,17;UBERON:0001948,1.97e-09,5;UBERON:0002315,1.97e-09,5;UBERON:0000025,7.12e-08,114;UBERON:0003076,1.34e-07,12;UBERON:0003057,1.34e-07,12;UBERON:0002021,3.26e-07,10;UBERON:0000411,3.26e-07,10;UBERON:0001950,3.26e-07,10;UBERON:0004111,7.85e-07,122;UBERON:0002950,7.93e-07,4;UBERON:0001891,7.93e-07,4;UBERON:0009616,7.93e-07,4;UBERON:0010286,7.93e-07,4
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27181028664753,12.1667925232568,5.07065122804943,0,0,0,0,0,0,0,2.69592992002042,2.29510095163874,2.3135745748652,2.85650984403804,1.76694832761291,1.71487118900936,1.43768206527355,1.83843757322004,0,2.80912143787413,3.22573719838111,6.85808696197008,9.33173964744578,7.8137005583514,1.95428099300967,1.68828783009504,2.44477196442896,9.1334861496837,7.97281412474976,6.52398060388552,0,0,0,0,0,0,0,0,0,0.340860645156116,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0.346970653532272,1.21786191324856,0.691846491768175,1.80867168663147,1.41106448562846,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,1.79748767285787,1.83000241127451,6.91098936620754,0.347648640384553,1.53429274398198,1.66230435647648,1.94689515681309,0.203678727700633,0.124406970610093,0,0.210441855886474,1.30120442962704,0.229902104433473,0.720248519221397,1.65775299619287,1.42876648217788,2.562274405697,0.655912071918102,4.65666067330228,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0,0,0,0,0,0,0.420579897128254,8.43817821510132,0,0,1.06644125267617,0.696710015581316,0.257734922644187,0.605050573870028,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0,1.79763881730844,0,0,0.379335801906163,0.456994050438915,0,0.610953983535943,0.387904974335251,0.49095073923223,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.937693492737625,0.163934945376675,0.252470927204373,0.631016438832513,0,0.861693590931196,0.238968797952552,0.891194696329576,0,0.809621403349789,0.292255857911312,0,2.57057053137446,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.857348140126369,0,0.713475270408282,0.822745103010605,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,1.11255181206306,0,0,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,0,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,9.03602948187307,5.06357760157895,4.58316410751517,0.859265911718438,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,2.71885445390523,1.03552062350364,0.415149390336707,1.59609949360412,0.682934423016537,0.486213434136588,0.209613162627982,0.367687016900028,0.888986911206461,1.64828045791115,0,0.505394423527595,0.50695859978048,0.377252682772152,0.280924522409647,0.832326981263301,0.34461281373368,0,0.463537303779422,0.38581844092741,0.824171801606613,0.294397840268795,0.685738504770831,1.24233064311536,0.476872379894642,0.581385666529314,0.752875043322645,0.423073039458382,0.365855945745545,1.57841826862706,1.62964936615034,2.24456908663095,0.593175090620871,1.37906275325789,0.818462086339379,0.464810523557898,0.192906610981141,0.749431733813838,0,0.644613162144895,0,0.220591419119515,0
|short_description=p@chr9:49315006..49315036,-
}}

Latest revision as of 06:36, 5 August 2015

Short description:p@chr9:49315006..49315036, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:49315006..49315036, -
Coexpression cluster:MCL_coexpression_mm9:393
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr9:49315006..49315036-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.52
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G18.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter2.24e-3134
neurectoderm3.44e-2964
neural plate3.44e-2964
presumptive neural plate3.44e-2964
regional part of nervous system8.63e-2954
neural tube1.06e-2752
neural rod1.06e-2752
future spinal cord1.06e-2752
neural keel1.06e-2752
central nervous system5.20e-2773
nervous system5.22e-2675
ectoderm-derived structure4.76e-2595
ectoderm4.76e-2595
presumptive ectoderm4.76e-2595
ecto-epithelium2.51e-2473
pre-chordal neural plate1.04e-2349
brain grey matter1.41e-2329
regional part of telencephalon1.41e-2329
telencephalon1.41e-2329
brain3.83e-2147
future brain3.83e-2147
structure with developmental contribution from neural crest7.80e-2192
anterior neural tube1.48e-2040
regional part of brain6.73e-2046
regional part of forebrain2.15e-1939
forebrain2.15e-1939
future forebrain2.15e-1939
basal ganglion1.22e-138
nuclear complex of neuraxis1.22e-138
aggregate regional part of brain1.22e-138
collection of basal ganglia1.22e-138
cerebral subcortex1.22e-138
cerebral cortex1.80e-1221
cerebral hemisphere1.80e-1221
pallium1.80e-1221
spinal cord2.59e-106
dorsal region element2.59e-106
dorsum2.59e-106
corpus striatum1.13e-095
striatum1.13e-095
ventral part of telencephalon1.13e-095
future corpus striatum1.13e-095
regional part of cerebral cortex1.45e-0917
regional part of spinal cord1.97e-095
gray matter of spinal cord1.97e-095
tube7.12e-08114
posterior neural tube1.34e-0712
chordal neural plate1.34e-0712
occipital lobe3.26e-0710
visual cortex3.26e-0710
neocortex3.26e-0710
anatomical conduit7.85e-07122
regional part of midbrain7.93e-074
midbrain7.93e-074
presumptive midbrain7.93e-074
midbrain neural tube7.93e-074
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