FFCP PHASE1:Mm9::chr11:117831657..117831668,-: Difference between revisions
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{{FFCP|EntrezGene=12702|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=-296bp_to_ENSMUST00000123255_5end|description=CAGE_peak_6_at_Socs3_5end|id=chr11:117831657..117831668,-|ontology_enrichment_celltype=CL:0002563!6.41e-13!9;CL:0002251!6.41e-13!9;CL:0000066!9.59e-12!25;CL:0000223!7.28e-10!20;CL:0000239!1.30e-09!6;CL:0000677!1.30e-09!6;CL:0000212!1.30e-09!6;CL:0000584!1.30e-09!6;CL:0000075!4.79e-08!7;CL:0002076!9.25e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,3.29e-26,6;CL:0000677,3.29e-26,6;CL:0000584,3.29e-26,6;CL:0002563,5.64e-23,9;CL:0002251,5.64e-23,9;CL:0000066,1.25e-22,25;CL:0000075,2.09e-22,7;CL:0000223,5.11e-16,20;CL:0002076,1.73e-13,15;CL:0000682,1.95e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.65e-20!15;UBERON:0000160!4.80e-19!43;UBERON:0005409!3.65e-18!59;UBERON:0001242!7.96e-18!13;UBERON:0000060!7.96e-18!13;UBERON:0001262!7.96e-18!13;UBERON:0004786!7.96e-18!13;UBERON:0001007!7.88e-17!128;UBERON:0001555!7.88e-17!128;UBERON:0007026!7.88e-17!128;UBERON:0004119!2.46e-16!130;UBERON:0000925!2.46e-16!130;UBERON:0006595!2.46e-16!130;UBERON:0004921!3.39e-15!126;UBERON:0004185!3.39e-15!126;UBERON:0003350!6.41e-13!9;UBERON:0004808!6.41e-13!9;UBERON:0001277!6.41e-13!9;UBERON:0004923!7.64e-11!24;UBERON:0000485!4.20e-10!11;UBERON:0003929!2.82e-09!55;UBERON:0002107!6.45e-07!22;UBERON:0007499!6.45e-07!22;UBERON:0006925!6.45e-07!22;UBERON:0009497!6.45e-07!22;UBERON:0000015!6.45e-07!22;UBERON:0002423!6.45e-07!22;UBERON:0006235!6.45e-07!22;UBERON:0008835!6.45e-07!22;UBERON:0003894!6.45e-07!22;UBERON:0004161!6.45e-07!22;UBERON:0008836!6.45e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.68e-33,15;UBERON:0001242,5.84e-26,13;UBERON:0001262,5.84e-26,13;UBERON:0004786,5.84e-26,13;UBERON:0003350,5.64e-23,9;UBERON:0004808,5.64e-23,9;UBERON:0001277,5.64e-23,9;UBERON:0000160,1.00e-21,31;UBERON:0004923,5.76e-20,24;UBERON:0000485,1.15e-18,11;UBERON:0005409,1.39e-13,47;UBERON:0001007,4.60e-09,116;UBERON:0001555,4.60e-09,116;UBERON:0007026,4.60e-09,116;UBERON:0001962,5.22e-09,2;UBERON:0001961,5.22e-09,2;UBERON:0001744,5.22e-09,2;UBERON:0004119,7.37e-09,118;UBERON:0000925,7.37e-09,118;UBERON:0006595,7.37e-09,118;UBERON:0004921,5.48e-07,114;UBERON:0000331,7.77e-07,3;UBERON:0002116,7.77e-07,3;UBERON:0001204,7.77e-07,3;UBERON:0001168,7.77e-07,3|phase1_expression=0,4.88565570695105,3.18499467572675,6.0492842261366,4.50806156951712,1.34303417529512,2.33612640595526,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,1.11994695955385,1.37645568640302,2.29692785646008,2.15380998079537,3.66301095566011,4.3705386474966,3.02436155711917,0.886922042621219,0,0,0,0.866554859253824,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0,0.869593466105033,0.860423876981386,0,1.07940638327563,0.649776417447669,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,3.17340679996253,0,0,0,0.403367049246685,0.889512175379481,0.951128130562796,2.37264530772256,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,3.59527763461689,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0.608580364165509,0.241177159752417,0,0,1.13494658742525,0.549122826376163,0,0,0.312037673114561,0,0.896987067609561,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p6@Socs3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12702 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-296bp_to_ENSMUST00000123255_5end | |||
|cluster_id=chr11:117831657..117831668,- | |||
|description=CAGE_peak_6_at_Socs3_5end | |||
|id=chr11:117831657..117831668,- | |||
|ontology_enrichment_celltype=CL:0002563!6.41e-13!9;CL:0002251!6.41e-13!9;CL:0000066!9.59e-12!25;CL:0000223!7.28e-10!20;CL:0000239!1.30e-09!6;CL:0000677!1.30e-09!6;CL:0000212!1.30e-09!6;CL:0000584!1.30e-09!6;CL:0000075!4.79e-08!7;CL:0002076!9.25e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.29e-26,6;CL:0000677,3.29e-26,6;CL:0000584,3.29e-26,6;CL:0002563,5.64e-23,9;CL:0002251,5.64e-23,9;CL:0000066,1.25e-22,25;CL:0000075,2.09e-22,7;CL:0000223,5.11e-16,20;CL:0002076,1.73e-13,15;CL:0000682,1.95e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.65e-20!15;UBERON:0000160!4.80e-19!43;UBERON:0005409!3.65e-18!59;UBERON:0001242!7.96e-18!13;UBERON:0000060!7.96e-18!13;UBERON:0001262!7.96e-18!13;UBERON:0004786!7.96e-18!13;UBERON:0001007!7.88e-17!128;UBERON:0001555!7.88e-17!128;UBERON:0007026!7.88e-17!128;UBERON:0004119!2.46e-16!130;UBERON:0000925!2.46e-16!130;UBERON:0006595!2.46e-16!130;UBERON:0004921!3.39e-15!126;UBERON:0004185!3.39e-15!126;UBERON:0003350!6.41e-13!9;UBERON:0004808!6.41e-13!9;UBERON:0001277!6.41e-13!9;UBERON:0004923!7.64e-11!24;UBERON:0000485!4.20e-10!11;UBERON:0003929!2.82e-09!55;UBERON:0002107!6.45e-07!22;UBERON:0007499!6.45e-07!22;UBERON:0006925!6.45e-07!22;UBERON:0009497!6.45e-07!22;UBERON:0000015!6.45e-07!22;UBERON:0002423!6.45e-07!22;UBERON:0006235!6.45e-07!22;UBERON:0008835!6.45e-07!22;UBERON:0003894!6.45e-07!22;UBERON:0004161!6.45e-07!22;UBERON:0008836!6.45e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.68e-33,15;UBERON:0001242,5.84e-26,13;UBERON:0001262,5.84e-26,13;UBERON:0004786,5.84e-26,13;UBERON:0003350,5.64e-23,9;UBERON:0004808,5.64e-23,9;UBERON:0001277,5.64e-23,9;UBERON:0000160,1.00e-21,31;UBERON:0004923,5.76e-20,24;UBERON:0000485,1.15e-18,11;UBERON:0005409,1.39e-13,47;UBERON:0001007,4.60e-09,116;UBERON:0001555,4.60e-09,116;UBERON:0007026,4.60e-09,116;UBERON:0001962,5.22e-09,2;UBERON:0001961,5.22e-09,2;UBERON:0001744,5.22e-09,2;UBERON:0004119,7.37e-09,118;UBERON:0000925,7.37e-09,118;UBERON:0006595,7.37e-09,118;UBERON:0004921,5.48e-07,114;UBERON:0000331,7.77e-07,3;UBERON:0002116,7.77e-07,3;UBERON:0001204,7.77e-07,3;UBERON:0001168,7.77e-07,3 | |||
|phase1_expression=0,4.88565570695105,3.18499467572675,6.0492842261366,4.50806156951712,1.34303417529512,2.33612640595526,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,1.11994695955385,1.37645568640302,2.29692785646008,2.15380998079537,3.66301095566011,4.3705386474966,3.02436155711917,0.886922042621219,0,0,0,0.866554859253824,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0,0.869593466105033,0.860423876981386,0,1.07940638327563,0.649776417447669,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,3.17340679996253,0,0,0,0.403367049246685,0.889512175379481,0.951128130562796,2.37264530772256,0.329397909448022,0.502670417600539,0.596869416123452,0.38992817423824,3.59527763461689,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0.608580364165509,0.241177159752417,0,0,1.13494658742525,0.549122826376163,0,0,0.312037673114561,0,0.896987067609561,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p6@Socs3 | |||
}} |
Revision as of 13:15, 5 August 2015
Short description: | p6@Socs3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Socs3_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -296bp_to_ENSMUST00000123255_5end |
EntrezGene: | 12702 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.29e-26 | 6 |
gut absorptive cell | 3.29e-26 | 6 |
enterocyte | 3.29e-26 | 6 |
intestinal epithelial cell | 5.64e-23 | 9 |
epithelial cell of alimentary canal | 5.64e-23 | 9 |
epithelial cell | 1.25e-22 | 25 |
columnar/cuboidal epithelial cell | 2.09e-22 | 7 |
endodermal cell | 5.11e-16 | 20 |
endo-epithelial cell | 1.73e-13 | 15 |
M cell of gut | 1.95e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.68e-33 | 15 |
intestinal mucosa | 5.84e-26 | 13 |
wall of intestine | 5.84e-26 | 13 |
gastrointestinal system mucosa | 5.84e-26 | 13 |
epithelium of mucosa | 5.64e-23 | 9 |
gastrointestinal system epithelium | 5.64e-23 | 9 |
intestinal epithelium | 5.64e-23 | 9 |
intestine | 1.00e-21 | 31 |
organ component layer | 5.76e-20 | 24 |
simple columnar epithelium | 1.15e-18 | 11 |
gastrointestinal system | 1.39e-13 | 47 |
digestive system | 4.60e-09 | 116 |
digestive tract | 4.60e-09 | 116 |
primitive gut | 4.60e-09 | 116 |
gut-associated lymphoid tissue | 5.22e-09 | 2 |
mucosa-associated lymphoid tissue | 5.22e-09 | 2 |
lymphoid tissue | 5.22e-09 | 2 |
endoderm-derived structure | 7.37e-09 | 118 |
endoderm | 7.37e-09 | 118 |
presumptive endoderm | 7.37e-09 | 118 |
subdivision of digestive tract | 5.48e-07 | 114 |
ileal mucosa | 7.77e-07 | 3 |
ileum | 7.77e-07 | 3 |
mucosa of small intestine | 7.77e-07 | 3 |
wall of small intestine | 7.77e-07 | 3 |