FFCP PHASE1:Mm9::chr18:46386734..46386746,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2240|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:46386734..46386746,+|id=chr18:46386734..46386746,+|ontology_enrichment_celltype=CL:0002563!6.13e-14!9;CL:0002251!6.13e-14!9;CL:0000239!1.27e-09!6;CL:0000677!1.27e-09!6;CL:0000212!1.27e-09!6;CL:0000584!1.27e-09!6;CL:0000075!4.11e-08!7;CL:0002076!1.54e-07!15;CL:0000066!5.50e-07!25|ontology_enrichment_celltype_v019_2=CL:0002563,3.52e-16,9;CL:0002251,3.52e-16,9;CL:0002250,5.59e-10,3;CL:0002076,2.29e-09,15;CL:0000239,1.73e-08,6;CL:0000677,1.73e-08,6;CL:0000584,1.73e-08,6;CL:0000075,2.75e-07,7;CL:0000066,7.48e-07,25;CL:0000223,8.27e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.01e-28!43;UBERON:0005409!1.43e-28!59;UBERON:0001242!1.36e-19!13;UBERON:0000060!1.36e-19!13;UBERON:0001262!1.36e-19!13;UBERON:0004786!1.36e-19!13;UBERON:0000344!1.93e-19!15;UBERON:0003350!6.13e-14!9;UBERON:0004808!6.13e-14!9;UBERON:0001277!6.13e-14!9;UBERON:0000485!5.09e-11!11;UBERON:0004923!1.08e-10!24;UBERON:0001007!4.48e-10!128;UBERON:0001555!4.48e-10!128;UBERON:0007026!4.48e-10!128;UBERON:0004119!9.18e-10!130;UBERON:0000925!9.18e-10!130;UBERON:0006595!9.18e-10!130;UBERON:0004921!1.59e-09!126;UBERON:0004185!1.59e-09!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.32e-50,31;UBERON:0005409,2.96e-35,47;UBERON:0000344,1.34e-23,15;UBERON:0001242,1.20e-22,13;UBERON:0001262,1.20e-22,13;UBERON:0004786,1.20e-22,13;UBERON:0003350,3.52e-16,9;UBERON:0004808,3.52e-16,9;UBERON:0001277,3.52e-16,9;UBERON:0004923,5.41e-14,24;UBERON:0000485,4.38e-13,11;UBERON:0001007,6.75e-13,116;UBERON:0001555,6.75e-13,116;UBERON:0007026,6.75e-13,116;UBERON:0004119,1.34e-12,118;UBERON:0000925,1.34e-12,118;UBERON:0006595,1.34e-12,118;UBERON:0004921,7.00e-12,114;UBERON:0001155,3.68e-08,2;UBERON:0000059,3.68e-08,2;UBERON:0002108,8.83e-08,4|phase1_expression=0,0.697950815278722,0.454999239389536,3.0246421130683,2.00358291978539,2.85394762250213,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,0,0.57423196411502,0.86152399231815,2.15471232685889,2.47030445293286,2.01624103807945,0.221730510655305,0,0,0,3.46621943701529,1.49611180822643,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,13.0474232852686,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8369532090749,0,0,0,0,0,0,0,4.65666067330228,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,2.11560453330835,0,0.232236671860439,0,0.403367049246685,0.889512175379481,1.71203063501303,4.74529061544512,1.81168850196412,1.75934646160189,1.79060824837036,1.75467678407208,3.59527763461689,5.40345124686736,4.58024928485045,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.655087691238533,0.539457385539283,0.330613822901344,0.785267825952089,5.70305882483889,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:46386734..46386746,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2240 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:46386734..46386746,+ | |||
|description=CAGE_peak_at_chr18:46386734..46386746,+ | |||
|id=chr18:46386734..46386746,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.13e-14!9;CL:0002251!6.13e-14!9;CL:0000239!1.27e-09!6;CL:0000677!1.27e-09!6;CL:0000212!1.27e-09!6;CL:0000584!1.27e-09!6;CL:0000075!4.11e-08!7;CL:0002076!1.54e-07!15;CL:0000066!5.50e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.52e-16,9;CL:0002251,3.52e-16,9;CL:0002250,5.59e-10,3;CL:0002076,2.29e-09,15;CL:0000239,1.73e-08,6;CL:0000677,1.73e-08,6;CL:0000584,1.73e-08,6;CL:0000075,2.75e-07,7;CL:0000066,7.48e-07,25;CL:0000223,8.27e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.01e-28!43;UBERON:0005409!1.43e-28!59;UBERON:0001242!1.36e-19!13;UBERON:0000060!1.36e-19!13;UBERON:0001262!1.36e-19!13;UBERON:0004786!1.36e-19!13;UBERON:0000344!1.93e-19!15;UBERON:0003350!6.13e-14!9;UBERON:0004808!6.13e-14!9;UBERON:0001277!6.13e-14!9;UBERON:0000485!5.09e-11!11;UBERON:0004923!1.08e-10!24;UBERON:0001007!4.48e-10!128;UBERON:0001555!4.48e-10!128;UBERON:0007026!4.48e-10!128;UBERON:0004119!9.18e-10!130;UBERON:0000925!9.18e-10!130;UBERON:0006595!9.18e-10!130;UBERON:0004921!1.59e-09!126;UBERON:0004185!1.59e-09!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.32e-50,31;UBERON:0005409,2.96e-35,47;UBERON:0000344,1.34e-23,15;UBERON:0001242,1.20e-22,13;UBERON:0001262,1.20e-22,13;UBERON:0004786,1.20e-22,13;UBERON:0003350,3.52e-16,9;UBERON:0004808,3.52e-16,9;UBERON:0001277,3.52e-16,9;UBERON:0004923,5.41e-14,24;UBERON:0000485,4.38e-13,11;UBERON:0001007,6.75e-13,116;UBERON:0001555,6.75e-13,116;UBERON:0007026,6.75e-13,116;UBERON:0004119,1.34e-12,118;UBERON:0000925,1.34e-12,118;UBERON:0006595,1.34e-12,118;UBERON:0004921,7.00e-12,114;UBERON:0001155,3.68e-08,2;UBERON:0000059,3.68e-08,2;UBERON:0002108,8.83e-08,4 | |||
|phase1_expression=0,0.697950815278722,0.454999239389536,3.0246421130683,2.00358291978539,2.85394762250213,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71987118748791,0,0.57423196411502,0.86152399231815,2.15471232685889,2.47030445293286,2.01624103807945,0.221730510655305,0,0,0,3.46621943701529,1.49611180822643,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,13.0474232852686,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8369532090749,0,0,0,0,0,0,0,4.65666067330228,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59963200862735,2.11560453330835,0,0.232236671860439,0,0.403367049246685,0.889512175379481,1.71203063501303,4.74529061544512,1.81168850196412,1.75934646160189,1.79060824837036,1.75467678407208,3.59527763461689,5.40345124686736,4.58024928485045,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,3.78925087618806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.655087691238533,0.539457385539283,0.330613822901344,0.785267825952089,5.70305882483889,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:46386734..46386746,+ | |||
}} |
Latest revision as of 20:06, 5 August 2015
Short description: | p@chr18:46386734..46386746, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:46386734..46386746, + |
Coexpression cluster: | MCL_coexpression_mm9:2240 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.52e-16 | 9 |
epithelial cell of alimentary canal | 3.52e-16 | 9 |
intestinal crypt stem cell | 5.59e-10 | 3 |
endo-epithelial cell | 2.29e-09 | 15 |
brush border epithelial cell | 1.73e-08 | 6 |
gut absorptive cell | 1.73e-08 | 6 |
enterocyte | 1.73e-08 | 6 |
columnar/cuboidal epithelial cell | 2.75e-07 | 7 |
epithelial cell | 7.48e-07 | 25 |
endodermal cell | 8.27e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.32e-50 | 31 |
gastrointestinal system | 2.96e-35 | 47 |
mucosa | 1.34e-23 | 15 |
intestinal mucosa | 1.20e-22 | 13 |
wall of intestine | 1.20e-22 | 13 |
gastrointestinal system mucosa | 1.20e-22 | 13 |
epithelium of mucosa | 3.52e-16 | 9 |
gastrointestinal system epithelium | 3.52e-16 | 9 |
intestinal epithelium | 3.52e-16 | 9 |
organ component layer | 5.41e-14 | 24 |
simple columnar epithelium | 4.38e-13 | 11 |
digestive system | 6.75e-13 | 116 |
digestive tract | 6.75e-13 | 116 |
primitive gut | 6.75e-13 | 116 |
endoderm-derived structure | 1.34e-12 | 118 |
endoderm | 1.34e-12 | 118 |
presumptive endoderm | 1.34e-12 | 118 |
subdivision of digestive tract | 7.00e-12 | 114 |
colon | 3.68e-08 | 2 |
large intestine | 3.68e-08 | 2 |
small intestine | 8.83e-08 | 4 |