FFCP PHASE1:Mm9::chr11:34211793..34211811,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:34211793..34211811,-|id=chr11:34211793..34211811,-|ontology_enrichment_celltype=CL:0000738!7.54e-07!17;CL:0002087!7.54e-07!17|ontology_enrichment_celltype_v019_2=CL:0002476,7.62e-20,2;CL:0002194,1.97e-10,4;CL:0000766,1.97e-10,4;CL:0000234,1.97e-10,4;CL:0000576,1.97e-10,4;CL:0000235,1.97e-10,4;CL:0000864,1.97e-10,4;CL:0002009,1.97e-10,4;CL:0000040,1.97e-10,4;CL:0000559,1.97e-10,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!6.66e-20!29;UBERON:0002390!3.46e-16!45;UBERON:0003061!3.46e-16!45;UBERON:0002193!5.47e-16!48;UBERON:0002370!3.02e-15!23;UBERON:0000974!3.02e-15!23;UBERON:0004807!3.02e-15!23;UBERON:0005058!3.02e-15!23;UBERON:0003351!3.02e-15!23;UBERON:0009113!3.02e-15!23;UBERON:0003295!3.02e-15!23;UBERON:0009722!3.02e-15!23;UBERON:0005562!3.02e-15!23;UBERON:0007690!3.02e-15!23;UBERON:0006562!2.15e-14!24;UBERON:0003408!2.15e-14!24;UBERON:0001557!2.15e-14!24;UBERON:0001042!2.15e-14!24;UBERON:0008814!2.15e-14!24;UBERON:0009145!2.15e-14!24;UBERON:0000065!5.03e-13!41;UBERON:0001004!1.49e-12!42;UBERON:0000072!3.19e-12!27;UBERON:0005057!1.64e-10!51;UBERON:0002405!2.98e-10!70;UBERON:0003081!2.29e-09!88;UBERON:0000063!2.61e-08!35;UBERON:0001041!7.99e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.79e-21,23;UBERON:0000974,8.79e-21,23;UBERON:0004807,8.79e-21,23;UBERON:0005058,8.79e-21,23;UBERON:0003351,8.79e-21,23;UBERON:0009113,8.79e-21,23;UBERON:0003295,8.79e-21,23;UBERON:0009722,8.79e-21,23;UBERON:0005562,8.79e-21,23;UBERON:0007690,8.79e-21,23;UBERON:0006562,6.47e-20,24;UBERON:0003408,6.47e-20,24;UBERON:0001557,6.47e-20,24;UBERON:0001042,6.47e-20,24;UBERON:0008814,6.47e-20,24;UBERON:0009145,6.47e-20,24;UBERON:0000072,1.07e-17,27;UBERON:0002390,2.69e-17,45;UBERON:0003061,2.69e-17,45;UBERON:0004177,1.80e-16,29;UBERON:0005057,1.80e-16,29;UBERON:0002193,3.33e-16,48;UBERON:0002405,3.33e-16,48;UBERON:0000077,1.25e-13,35;UBERON:0007811,3.01e-13,36;UBERON:0000065,1.29e-11,41;UBERON:0001004,2.47e-11,42;UBERON:0000153,4.57e-11,43;UBERON:0003081,8.24e-09,87;UBERON:0003929,1.32e-08,55;UBERON:0002368,7.23e-08,60;UBERON:0002530,3.06e-07,65;UBERON:0000490,3.98e-07,66;UBERON:0005911,8.37e-07,69|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.281577444303333,0.234064526321993,0,0,0.684802919724823,0.524522414513984,0,0,0,0.473193248037357,0.685572168028694,0,0,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0.662524555381181,0.484875253135222,0,0,0,0,0.359445373517761,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.486405680325106,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.44292937929755,0.637819074629948,0.163863314715738,0.863424909329478,0,1.50791283939272,1.08781136763742,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,0.341741761595705,0,0.370389054739423,0.376736914009382,0.956859594047176,0.457556346413045,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.649604114888975,0,0.596044064343795,1.56254084375959,0.886137163047463,1.81739609906666,2.59103142626999,3.02478555410522,2.63136277997332,1.73181314952593,1.28564592399726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.17230640686684,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr11:34211793..34211811,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:34211793..34211811,- | |||
|description=CAGE_peak_at_chr11:34211793..34211811,- | |||
|id=chr11:34211793..34211811,- | |||
|ontology_enrichment_celltype=CL:0000738!7.54e-07!17;CL:0002087!7.54e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,7.62e-20,2;CL:0002194,1.97e-10,4;CL:0000766,1.97e-10,4;CL:0000234,1.97e-10,4;CL:0000576,1.97e-10,4;CL:0000235,1.97e-10,4;CL:0000864,1.97e-10,4;CL:0002009,1.97e-10,4;CL:0000040,1.97e-10,4;CL:0000559,1.97e-10,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.66e-20!29;UBERON:0002390!3.46e-16!45;UBERON:0003061!3.46e-16!45;UBERON:0002193!5.47e-16!48;UBERON:0002370!3.02e-15!23;UBERON:0000974!3.02e-15!23;UBERON:0004807!3.02e-15!23;UBERON:0005058!3.02e-15!23;UBERON:0003351!3.02e-15!23;UBERON:0009113!3.02e-15!23;UBERON:0003295!3.02e-15!23;UBERON:0009722!3.02e-15!23;UBERON:0005562!3.02e-15!23;UBERON:0007690!3.02e-15!23;UBERON:0006562!2.15e-14!24;UBERON:0003408!2.15e-14!24;UBERON:0001557!2.15e-14!24;UBERON:0001042!2.15e-14!24;UBERON:0008814!2.15e-14!24;UBERON:0009145!2.15e-14!24;UBERON:0000065!5.03e-13!41;UBERON:0001004!1.49e-12!42;UBERON:0000072!3.19e-12!27;UBERON:0005057!1.64e-10!51;UBERON:0002405!2.98e-10!70;UBERON:0003081!2.29e-09!88;UBERON:0000063!2.61e-08!35;UBERON:0001041!7.99e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.79e-21,23;UBERON:0000974,8.79e-21,23;UBERON:0004807,8.79e-21,23;UBERON:0005058,8.79e-21,23;UBERON:0003351,8.79e-21,23;UBERON:0009113,8.79e-21,23;UBERON:0003295,8.79e-21,23;UBERON:0009722,8.79e-21,23;UBERON:0005562,8.79e-21,23;UBERON:0007690,8.79e-21,23;UBERON:0006562,6.47e-20,24;UBERON:0003408,6.47e-20,24;UBERON:0001557,6.47e-20,24;UBERON:0001042,6.47e-20,24;UBERON:0008814,6.47e-20,24;UBERON:0009145,6.47e-20,24;UBERON:0000072,1.07e-17,27;UBERON:0002390,2.69e-17,45;UBERON:0003061,2.69e-17,45;UBERON:0004177,1.80e-16,29;UBERON:0005057,1.80e-16,29;UBERON:0002193,3.33e-16,48;UBERON:0002405,3.33e-16,48;UBERON:0000077,1.25e-13,35;UBERON:0007811,3.01e-13,36;UBERON:0000065,1.29e-11,41;UBERON:0001004,2.47e-11,42;UBERON:0000153,4.57e-11,43;UBERON:0003081,8.24e-09,87;UBERON:0003929,1.32e-08,55;UBERON:0002368,7.23e-08,60;UBERON:0002530,3.06e-07,65;UBERON:0000490,3.98e-07,66;UBERON:0005911,8.37e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.281577444303333,0.234064526321993,0,0,0.684802919724823,0.524522414513984,0,0,0,0.473193248037357,0.685572168028694,0,0,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0.662524555381181,0.484875253135222,0,0,0,0,0.359445373517761,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.486405680325106,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.44292937929755,0.637819074629948,0.163863314715738,0.863424909329478,0,1.50791283939272,1.08781136763742,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,0.341741761595705,0,0.370389054739423,0.376736914009382,0.956859594047176,0.457556346413045,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0.649604114888975,0,0.596044064343795,1.56254084375959,0.886137163047463,1.81739609906666,2.59103142626999,3.02478555410522,2.63136277997332,1.73181314952593,1.28564592399726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.17230640686684,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:34211793..34211811,- | |||
}} |
Latest revision as of 20:37, 5 August 2015
Short description: | p@chr11:34211793..34211811, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:34211793..34211811, - |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 7.62e-20 | 2 |
monopoietic cell | 1.97e-10 | 4 |
myeloid leukocyte | 1.97e-10 | 4 |
phagocyte | 1.97e-10 | 4 |
monocyte | 1.97e-10 | 4 |
macrophage | 1.97e-10 | 4 |
tissue-resident macrophage | 1.97e-10 | 4 |
macrophage dendritic cell progenitor | 1.97e-10 | 4 |
monoblast | 1.97e-10 | 4 |
promonocyte | 1.97e-10 | 4 |