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FFCP PHASE1:Mm9::chr13:29045252..29045271,-: Difference between revisions

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{{FFCP|EntrezGene=20677|HGNC=|MCL_coexpression_id=76|UniProt=Q06831|association_with_transcript=279bp_to_NM_009238,uc007pyk.1_5end|description=CAGE_peak_5_at_Sox4_5end|id=chr13:29045252..29045271,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,1.14e-16,6;CL:0000117,1.15e-16,23;CL:0000337,1.15e-16,23;CL:0000393,3.89e-15,39;CL:0000211,3.89e-15,39;CL:0000540,1.86e-12,33;CL:0000047,1.86e-12,33;CL:0000031,1.86e-12,33;CL:0000404,1.86e-12,33;CL:0002319,3.56e-10,43;CL:0000221,7.23e-10,44;CL:0000133,7.23e-10,44;CL:0002608,5.11e-09,3;CL:0000120,2.93e-08,3;CL:0002613,4.85e-08,3;CL:0002321,1.16e-07,70;CL:0000192,1.62e-07,3;CL:0000359,1.62e-07,3;CL:0002539,1.62e-07,3;CL:0000514,1.62e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.04e-10!34;UBERON:0000956!1.55e-10!21;UBERON:0001869!1.55e-10!21;UBERON:0000203!1.55e-10!21;UBERON:0002791!1.50e-09!29;UBERON:0003528!1.50e-09!29;UBERON:0001893!1.50e-09!29;UBERON:0002619!2.98e-08!17;UBERON:0002780!1.93e-07!39;UBERON:0001890!1.93e-07!39;UBERON:0006240!1.93e-07!39;UBERON:0000073!2.65e-07!75;UBERON:0001016!2.65e-07!75;UBERON:0003056!3.76e-07!49;UBERON:0003080!6.87e-07!40;UBERON:0001017!8.30e-07!73;UBERON:0005743!8.30e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0003528,9.29e-23,29;UBERON:0002791,9.29e-23,29;UBERON:0001893,9.29e-23,29;UBERON:0002020,4.28e-21,34;UBERON:0000956,5.40e-19,21;UBERON:0001869,5.40e-19,21;UBERON:0000203,5.40e-19,21;UBERON:0002780,8.92e-18,39;UBERON:0001890,8.92e-18,39;UBERON:0006240,8.92e-18,39;UBERON:0003080,3.19e-17,40;UBERON:0000955,8.76e-16,47;UBERON:0006238,8.76e-16,47;UBERON:0001017,5.35e-15,73;UBERON:0001016,1.89e-14,75;UBERON:0002616,2.06e-14,46;UBERON:0001049,9.22e-14,52;UBERON:0005068,9.22e-14,52;UBERON:0006241,9.22e-14,52;UBERON:0007135,9.22e-14,52;UBERON:0002619,1.06e-13,17;UBERON:0003056,2.87e-13,49;UBERON:0000073,4.38e-13,54;UBERON:0002346,2.41e-10,64;UBERON:0003075,2.41e-10,64;UBERON:0007284,2.41e-10,64;UBERON:0004121,3.08e-10,95;UBERON:0000924,3.08e-10,95;UBERON:0006601,3.08e-10,95;UBERON:0001954,1.80e-09,7;UBERON:0003022,1.80e-09,7;UBERON:0002421,1.80e-09,7;UBERON:0000349,1.80e-09,7;UBERON:0002600,1.80e-09,7;UBERON:0010371,1.57e-08,73;UBERON:0000369,2.40e-08,5;UBERON:0002435,2.40e-08,5;UBERON:0000204,2.40e-08,5;UBERON:0010082,2.40e-08,5;UBERON:0001135,1.62e-07,3;UBERON:0004237,1.62e-07,3;UBERON:0004695,1.62e-07,3;UBERON:0002111,1.62e-07,3;UBERON:0004178,1.62e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0.140788722151667,0.70219357896598,0,0.159544317990673,0.342401459862411,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0.297872853602656,0,0.319984845586813,0,0,0.430761996159075,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.21652317463417,1.46837401729345,0,0.65407546914134,1.09843091367236,0.388859798148567,0.699932108126813,0,0,0,0,0.771778308107841,0,0,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0.449949858640699,0,0,0.599200221036809,0.768436610643109,5.91030790158323,11.6105106965254,8.41299845405528,0.285650984403804,1.10434270475807,2.57230678351403,3.1629005436018,2.75765635983006,0,0,0.307213066512487,1.18697658957174,1.55528994124096,1.56274011167028,0,0,0.15279824777681,0.883885756421003,0.284743361598206,0.931997229126503,0.984440513331393,0.453429360640713,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0.70667914902068,0.563373679106722,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.22836775943812,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0,0.470354828542819,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.381210681219194,0,0,2.26177833803156,0.521472960576829,0.255715457330331,0,0,0.203678727700633,0.373220911830279,0,0,0.520481771850815,0.229902104433473,0.720248519221397,0.150704817835715,0.272145996605311,0.768682321709099,0.655912071918102,0.258703370739016,0.431135985865684,0.567318240503458,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0.59710280045548,0,0.257347907114715,0.284163499395593,0.414251545071004,0,0.36012412292203,0.473489471170421,0,0.154267112887378,0.465067889500816,0,0.350296027101508,0.16455984991348,0.492502392237286,0.648550476366846,0.292399974850665,0.439100230582101,0.402619256281115,0.630869845692382,12.4514580978934,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.210407459670956,0.505892296994058,0.442830443938806,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0,0.195133647857799,0.472905432318573,0.664394068946325,0.478364305972461,0.49158994414721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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20677
|HGNC=
|MCL_coexpression_id=76
|TSSclassifier=NA
|UniProt=uniprot:Q06831
|association_with_transcript=279bp_to_NM_009238,uc007pyk.1_5end
|cluster_id=chr13:29045252..29045271,-
|description=CAGE_peak_5_at_Sox4_5end
|id=chr13:29045252..29045271,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002609,1.14e-16,6;CL:0000117,1.15e-16,23;CL:0000337,1.15e-16,23;CL:0000393,3.89e-15,39;CL:0000211,3.89e-15,39;CL:0000540,1.86e-12,33;CL:0000047,1.86e-12,33;CL:0000031,1.86e-12,33;CL:0000404,1.86e-12,33;CL:0002319,3.56e-10,43;CL:0000221,7.23e-10,44;CL:0000133,7.23e-10,44;CL:0002608,5.11e-09,3;CL:0000120,2.93e-08,3;CL:0002613,4.85e-08,3;CL:0002321,1.16e-07,70;CL:0000192,1.62e-07,3;CL:0000359,1.62e-07,3;CL:0002539,1.62e-07,3;CL:0000514,1.62e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.04e-10!34;UBERON:0000956!1.55e-10!21;UBERON:0001869!1.55e-10!21;UBERON:0000203!1.55e-10!21;UBERON:0002791!1.50e-09!29;UBERON:0003528!1.50e-09!29;UBERON:0001893!1.50e-09!29;UBERON:0002619!2.98e-08!17;UBERON:0002780!1.93e-07!39;UBERON:0001890!1.93e-07!39;UBERON:0006240!1.93e-07!39;UBERON:0000073!2.65e-07!75;UBERON:0001016!2.65e-07!75;UBERON:0003056!3.76e-07!49;UBERON:0003080!6.87e-07!40;UBERON:0001017!8.30e-07!73;UBERON:0005743!8.30e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0003528,9.29e-23,29;UBERON:0002791,9.29e-23,29;UBERON:0001893,9.29e-23,29;UBERON:0002020,4.28e-21,34;UBERON:0000956,5.40e-19,21;UBERON:0001869,5.40e-19,21;UBERON:0000203,5.40e-19,21;UBERON:0002780,8.92e-18,39;UBERON:0001890,8.92e-18,39;UBERON:0006240,8.92e-18,39;UBERON:0003080,3.19e-17,40;UBERON:0000955,8.76e-16,47;UBERON:0006238,8.76e-16,47;UBERON:0001017,5.35e-15,73;UBERON:0001016,1.89e-14,75;UBERON:0002616,2.06e-14,46;UBERON:0001049,9.22e-14,52;UBERON:0005068,9.22e-14,52;UBERON:0006241,9.22e-14,52;UBERON:0007135,9.22e-14,52;UBERON:0002619,1.06e-13,17;UBERON:0003056,2.87e-13,49;UBERON:0000073,4.38e-13,54;UBERON:0002346,2.41e-10,64;UBERON:0003075,2.41e-10,64;UBERON:0007284,2.41e-10,64;UBERON:0004121,3.08e-10,95;UBERON:0000924,3.08e-10,95;UBERON:0006601,3.08e-10,95;UBERON:0001954,1.80e-09,7;UBERON:0003022,1.80e-09,7;UBERON:0002421,1.80e-09,7;UBERON:0000349,1.80e-09,7;UBERON:0002600,1.80e-09,7;UBERON:0010371,1.57e-08,73;UBERON:0000369,2.40e-08,5;UBERON:0002435,2.40e-08,5;UBERON:0000204,2.40e-08,5;UBERON:0010082,2.40e-08,5;UBERON:0001135,1.62e-07,3;UBERON:0004237,1.62e-07,3;UBERON:0004695,1.62e-07,3;UBERON:0002111,1.62e-07,3;UBERON:0004178,1.62e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0.140788722151667,0.70219357896598,0,0.159544317990673,0.342401459862411,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0.297872853602656,0,0.319984845586813,0,0,0.430761996159075,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.21652317463417,1.46837401729345,0,0.65407546914134,1.09843091367236,0.388859798148567,0.699932108126813,0,0,0,0,0.771778308107841,0,0,1.41621522601718,2.64495489636016,1.26766280701236,0,0,0.449949858640699,0,0,0.599200221036809,0.768436610643109,5.91030790158323,11.6105106965254,8.41299845405528,0.285650984403804,1.10434270475807,2.57230678351403,3.1629005436018,2.75765635983006,0,0,0.307213066512487,1.18697658957174,1.55528994124096,1.56274011167028,0,0,0.15279824777681,0.883885756421003,0.284743361598206,0.931997229126503,0.984440513331393,0.453429360640713,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0.70667914902068,0.563373679106722,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.22836775943812,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0,0.470354828542819,0.125666591329675,0,0.289198713839823,0,0.323533699894818,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.381210681219194,0,0,2.26177833803156,0.521472960576829,0.255715457330331,0,0,0.203678727700633,0.373220911830279,0,0,0.520481771850815,0.229902104433473,0.720248519221397,0.150704817835715,0.272145996605311,0.768682321709099,0.655912071918102,0.258703370739016,0.431135985865684,0.567318240503458,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0.59710280045548,0,0.257347907114715,0.284163499395593,0.414251545071004,0,0.36012412292203,0.473489471170421,0,0.154267112887378,0.465067889500816,0,0.350296027101508,0.16455984991348,0.492502392237286,0.648550476366846,0.292399974850665,0.439100230582101,0.402619256281115,0.630869845692382,12.4514580978934,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.210407459670956,0.505892296994058,0.442830443938806,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0,0.195133647857799,0.472905432318573,0.664394068946325,0.478364305972461,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0,0.327869890753351,0.252470927204373,0.315508219416257,0,0.646270193198397,0.238968797952552,0,0.566153061577665,0,0.292255857911312,1.18586333383957,1.28528526568723,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0.363533729477506,1.06949213515416,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0.21183207086382,0.441056796109924,0.49465875882444,0.322928853391811,0.784068024066026,0,0.328281799490123,0.291480836629851,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0.559805809294632,0.690999869022119,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.165306911450672,0,0,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0,0.352071715937262,0.39061315453185,0.209718688851422,0.241584120826006,0,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0,0.993406773906324,0.600977247599844,0.295379054349154,0.201932899896295,0.304827226619999,0.504130925684203,0.38983152295901,0.673482891482306,0.350630706544707,0,0,0.0897138566094757,0,0,0.375364950902364,0.549454872801795,0.643105137237198,0,1.6942555278512,1.38097570952153,1.71868654031819,0.859265911718438,1.37016503954128,0.755393897389701,0,0.900642406448441,0.453142408984205,2.07104124700728,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.735374033800057,0.666740183404846,1.23621034343337,1.60459604795908,0.505394423527595,1.01391719956096,0.754505365544305,0.468207537349412,0.576226371643824,0.631790158511746,0,0.695305955669133,0.77163688185482,0.412085900803307,0.883193520806384,1.02860775715625,0.70990322463735,0.238436189947321,0.290692833264657,0.376437521661322,0.761531471025089,1.46342378298218,0,0.814824683075171,1.68342681497322,0.474540072496697,0.591026894253381,0,0.464810523557898,0.578719832943424,1.24905288968973,0.701794825336225,0.214871054048298,0.382576664137687,1.10295709559758,1.15933917810211
|short_description=p5@Sox4
}}

Revision as of 21:06, 5 August 2015

Short description:p5@Sox4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Sox4_5end
Coexpression cluster:MCL_coexpression_mm9:76
Association with transcript: 279bp_to_NM_009238, uc007pyk.1_5end
EntrezGene:20677
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Sox4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G112.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain grey matter9.29e-2329
regional part of telencephalon9.29e-2329
telencephalon9.29e-2329
gray matter4.28e-2134
cerebral cortex5.40e-1921
cerebral hemisphere5.40e-1921
pallium5.40e-1921
regional part of forebrain8.92e-1839
forebrain8.92e-1839
future forebrain8.92e-1839
anterior neural tube3.19e-1740
brain8.76e-1647
future brain8.76e-1647
central nervous system5.35e-1573
nervous system1.89e-1475
regional part of brain2.06e-1446
neural tube9.22e-1452
neural rod9.22e-1452
future spinal cord9.22e-1452
neural keel9.22e-1452
regional part of cerebral cortex1.06e-1317
pre-chordal neural plate2.87e-1349
regional part of nervous system4.38e-1354
neurectoderm2.41e-1064
neural plate2.41e-1064
presumptive neural plate2.41e-1064
ectoderm-derived structure3.08e-1095
ectoderm3.08e-1095
presumptive ectoderm3.08e-1095
Ammon's horn1.80e-097
lobe parts of cerebral cortex1.80e-097
hippocampal formation1.80e-097
limbic system1.80e-097
limbic lobe1.80e-097
ecto-epithelium1.57e-0873
corpus striatum2.40e-085
striatum2.40e-085
ventral part of telencephalon2.40e-085
future corpus striatum2.40e-085
smooth muscle tissue1.62e-073
blood vessel smooth muscle1.62e-073
arterial system smooth muscle1.62e-073
artery smooth muscle tissue1.62e-073
aorta smooth muscle tissue1.62e-073
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