FFCP PHASE2:Hg19::chr21:45773515..45773524,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7226 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:12339 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=12339 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O94759,Q5KTC1,Q14DR2 | ||
|association_with_transcript=31bp_to_NM_003307,NR_038257,uc002zew.1,uc010gpt.1_5end | |association_with_transcript=31bp_to_NM_003307,NR_038257,uc002zew.1,uc010gpt.1_5end | ||
|cluster_id=chr21:45773515..45773524,+ | |cluster_id=chr21:45773515..45773524,+ |
Latest revision as of 18:52, 18 September 2015
Short description: | p5@TRPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRPM2_5end |
Coexpression cluster: | C4081_granulocyte_Monocytederived_acute_Macrophage_CD14_Dendritic_biphenotypic |
Association with transcript: | 31bp_to_NM_003307, NR_038257, uc002zew.1, uc010gpt.1_5end |
EntrezGene: | TRPM2 |
HGNC: | 12339 |
UniProt: | O94759Q5KTC1Q14DR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@TRPM2 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.29e-42 | 108 |
common myeloid progenitor | 1.29e-42 | 108 |
hematopoietic stem cell | 4.15e-34 | 168 |
monopoietic cell | 1.52e-33 | 59 |
monocyte | 1.52e-33 | 59 |
monoblast | 1.52e-33 | 59 |
promonocyte | 1.52e-33 | 59 |
macrophage dendritic cell progenitor | 2.77e-32 | 61 |
hematopoietic cell | 5.80e-32 | 177 |
granulocyte monocyte progenitor cell | 6.27e-32 | 67 |
Showing 1 to 10 of 30 entries
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.60e-27 | 76 |
bone element | 4.08e-25 | 82 |
immune system | 1.72e-23 | 93 |
skeletal element | 2.10e-22 | 90 |
hematopoietic system | 5.27e-22 | 98 |
blood island | 5.27e-22 | 98 |
skeletal system | 1.28e-19 | 100 |
hemolymphoid system | 1.92e-19 | 108 |
connective tissue | 6.83e-11 | 371 |
musculoskeletal system | 1.38e-09 | 167 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
leukemia | 3.21e-22 | 39 |
myeloid leukemia | 2.41e-18 | 31 |
hematologic cancer | 3.49e-16 | 51 |
immune system cancer | 3.49e-16 | 51 |
Showing 1 to 4 of 4 entries