FFCP PHASE2:Hg19::chr18:21033303..21033317,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8780 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11451 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11451 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O14730 | ||
|association_with_transcript=-7bp_to_AF013591_5end | |association_with_transcript=-7bp_to_AF013591_5end | ||
|cluster_id=chr18:21033303..21033317,+ | |cluster_id=chr18:21033303..21033317,+ | ||
Latest revision as of 23:38, 18 September 2015
| Short description: | p2@RIOK3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_RIOK3_5end |
| Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
| Association with transcript: | -7bp_to_AF013591_5end |
| EntrezGene: | RIOK3 |
| HGNC: | 11451 |
| UniProt: | O14730 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@RIOK3 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 7.16e-37 | 42 |
| CD14-positive, CD16-negative classical monocyte | 7.16e-37 | 42 |
| defensive cell | 2.63e-32 | 48 |
| phagocyte | 2.63e-32 | 48 |
| myeloid leukocyte | 1.58e-30 | 72 |
| myeloid lineage restricted progenitor cell | 5.98e-25 | 66 |
| macrophage dendritic cell progenitor | 7.54e-25 | 61 |
| monopoietic cell | 1.83e-24 | 59 |
| monocyte | 1.83e-24 | 59 |
| monoblast | 1.83e-24 | 59 |
Showing 1 to 10 of 26 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 8.19e-28 | 98 |
| blood island | 8.19e-28 | 98 |
| hemolymphoid system | 9.67e-26 | 108 |
| bone marrow | 6.80e-21 | 76 |
| bone element | 2.37e-18 | 82 |
| immune system | 1.97e-16 | 93 |
| skeletal element | 2.28e-16 | 90 |
| skeletal system | 2.13e-13 | 100 |
| blood | 5.84e-13 | 15 |
| haemolymphatic fluid | 5.84e-13 | 15 |
Showing 1 to 10 of 12 entries
