FF:11560-120D3: Difference between revisions

Revision as of 15:24, 15 May 2017

Name:	Fibroblast - skin dystrophia myotonica, donor3
Species:	Human (Homo sapiens)
Library ID:	CNhs11913
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	skin
dev stage	NA
sex	M
age	18 year old adult
cell type	fibroblast
cell line	NA
company	Coriell
collaboration	Splicing (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	custom
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005411

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11913		CAGE		DRX008286		DRR009158

Accession ID Hg19

Library id		BAM		CTSS
CNhs11913		DRZ000583		DRZ001968

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.113
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.162
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.5
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0058
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.241
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0814
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.423
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.235
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.309
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.261
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0485
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0814
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.261
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0263
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.117
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0426
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.388
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.209
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.531
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.209
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.514
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.486
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11913

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.187
MA0003.1	MA0003.1	0.739
MA0004.1	MA0004.1	0.0108
MA0006.1	MA0006.1	0.433
MA0007.1	MA0007.1	0.503
MA0009.1	MA0009.1	0.374
MA0014.1	MA0014.1	0.495
MA0017.1	MA0017.1	0.083
MA0018.2	MA0018.2	1.82619e-6
MA0019.1	MA0019.1	0.744
MA0024.1	MA0024.1	0.702
MA0025.1	MA0025.1	0.0866
MA0027.1	MA0027.1	0.499
MA0028.1	MA0028.1	0.224
MA0029.1	MA0029.1	0.328
MA0030.1	MA0030.1	0.56
MA0031.1	MA0031.1	0.954
MA0035.2	MA0035.2	0.00904
MA0038.1	MA0038.1	0.251
MA0039.2	MA0039.2	0.019
MA0040.1	MA0040.1	0.339
MA0041.1	MA0041.1	0.589
MA0042.1	MA0042.1	0.794
MA0043.1	MA0043.1	0.00625
MA0046.1	MA0046.1	0.926
MA0047.2	MA0047.2	0.924
MA0048.1	MA0048.1	0.0327
MA0050.1	MA0050.1	0.227
MA0051.1	MA0051.1	0.689
MA0052.1	MA0052.1	0.488
MA0055.1	MA0055.1	0.337
MA0057.1	MA0057.1	0.409
MA0058.1	MA0058.1	0.00546
MA0059.1	MA0059.1	0.0704
MA0060.1	MA0060.1	0.00196
MA0061.1	MA0061.1	0.015
MA0062.2	MA0062.2	0.174
MA0065.2	MA0065.2	0.0574
MA0066.1	MA0066.1	0.829
MA0067.1	MA0067.1	0.00588
MA0068.1	MA0068.1	0.878
MA0069.1	MA0069.1	0.206
MA0070.1	MA0070.1	0.649
MA0071.1	MA0071.1	0.333
MA0072.1	MA0072.1	0.674
MA0073.1	MA0073.1	0.823
MA0074.1	MA0074.1	0.988
MA0076.1	MA0076.1	0.14
MA0077.1	MA0077.1	0.2
MA0078.1	MA0078.1	0.398
MA0079.2	MA0079.2	0.813
MA0080.2	MA0080.2	2.03326e-8
MA0081.1	MA0081.1	0.102
MA0083.1	MA0083.1	0.135
MA0084.1	MA0084.1	0.161
MA0087.1	MA0087.1	0.719
MA0088.1	MA0088.1	0.421
MA0090.1	MA0090.1	1.65578e-4
MA0091.1	MA0091.1	0.0776
MA0092.1	MA0092.1	0.237
MA0093.1	MA0093.1	0.025
MA0099.2	MA0099.2	0.953
MA0100.1	MA0100.1	0.883
MA0101.1	MA0101.1	0.00149
MA0102.2	MA0102.2	0.744
MA0103.1	MA0103.1	6.53335e-6
MA0104.2	MA0104.2	0.0051
MA0105.1	MA0105.1	0.141
MA0106.1	MA0106.1	0.0275
MA0107.1	MA0107.1	4.9867e-4
MA0108.2	MA0108.2	0.88
MA0111.1	MA0111.1	0.0697
MA0112.2	MA0112.2	0.463
MA0113.1	MA0113.1	0.876
MA0114.1	MA0114.1	0.0521
MA0115.1	MA0115.1	0.081
MA0116.1	MA0116.1	0.987
MA0117.1	MA0117.1	0.703
MA0119.1	MA0119.1	0.807
MA0122.1	MA0122.1	0.55
MA0124.1	MA0124.1	0.987
MA0125.1	MA0125.1	0.549
MA0131.1	MA0131.1	0.825
MA0135.1	MA0135.1	0.913
MA0136.1	MA0136.1	2.81531e-6
MA0137.2	MA0137.2	0.672
MA0138.2	MA0138.2	0.918
MA0139.1	MA0139.1	0.657
MA0140.1	MA0140.1	0.041
MA0141.1	MA0141.1	0.135
MA0142.1	MA0142.1	0.00919
MA0143.1	MA0143.1	0.731
MA0144.1	MA0144.1	0.788
MA0145.1	MA0145.1	0.76
MA0146.1	MA0146.1	0.893
MA0147.1	MA0147.1	0.039
MA0148.1	MA0148.1	0.856
MA0149.1	MA0149.1	0.55
MA0150.1	MA0150.1	0.229
MA0152.1	MA0152.1	0.0325
MA0153.1	MA0153.1	0.285
MA0154.1	MA0154.1	0.886
MA0155.1	MA0155.1	0.563
MA0156.1	MA0156.1	0.0226
MA0157.1	MA0157.1	0.853
MA0159.1	MA0159.1	0.266
MA0160.1	MA0160.1	0.0203
MA0162.1	MA0162.1	0.295
MA0163.1	MA0163.1	0.041
MA0164.1	MA0164.1	0.718
MA0258.1	MA0258.1	0.164
MA0259.1	MA0259.1	0.431

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11913

Novel motif	Logo	P-value
1	1	0.525
10	10	0.948
100	100	0.399
101	101	0.242
102	102	0.0377
103	103	0.826
104	104	0.677
105	105	0.375
106	106	0.0605
107	107	0.469
108	108	0.701
109	109	0.7
11	11	0.557
110	110	0.64
111	111	0.121
112	112	0.968
113	113	9.16156e-4
114	114	0.907
115	115	0.326
116	116	0.615
117	117	0.972
118	118	0.765
119	119	0.143
12	12	0.32
120	120	0.591
121	121	0.508
122	122	0.114
123	123	2.09756e-5
124	124	0.964
125	125	0.83
126	126	0.533
127	127	0.452
128	128	0.139
129	129	0.509
13	13	0.311
130	130	0.0821
131	131	0.635
132	132	0.497
133	133	0.679
134	134	0.39
135	135	0.44
136	136	0.152
137	137	0.371
138	138	0.424
139	139	0.0422
14	14	0.291
140	140	0.293
141	141	0.0757
142	142	0.841
143	143	0.574
144	144	0.77
145	145	0.768
146	146	0.652
147	147	0.136
148	148	0.0548
149	149	0.101
15	15	0.127
150	150	0.372
151	151	0.238
152	152	0.365
153	153	0.366
154	154	0.754
155	155	0.00409
156	156	0.673
157	157	0.217
158	158	0.00256
159	159	0.363
16	16	0.428
160	160	0.792
161	161	0.388
162	162	0.658
163	163	0.858
164	164	0.993
165	165	0.0804
166	166	0.0571
167	167	0.348
168	168	0.558
169	169	0.111
17	17	0.894
18	18	0.353
19	19	0.0432
2	2	0.413
20	20	0.48
21	21	0.148
22	22	0.382
23	23	0.886
24	24	0.918
25	25	0.305
26	26	0.488
27	27	0.951
28	28	0.504
29	29	0.948
3	3	0.88
30	30	0.138
31	31	0.717
32	32	1.68831e-9
33	33	0.58
34	34	0.971
35	35	0.444
36	36	0.0399
37	37	0.191
38	38	0.297
39	39	0.543
4	4	0.418
40	40	0.0217
41	41	0.558
42	42	0.72
43	43	0.259
44	44	0.547
45	45	0.569
46	46	0.816
47	47	0.462
48	48	0.544
49	49	0.0749
5	5	0.76
50	50	0.607
51	51	0.743
52	52	0.53
53	53	0.223
54	54	0.781
55	55	0.19
56	56	0.868
57	57	0.884
58	58	0.11
59	59	0.531
6	6	0.266
60	60	0.124
61	61	0.766
62	62	0.317
63	63	0.754
64	64	0.422
65	65	0.578
66	66	0.848
67	67	0.642
68	68	0.944
69	69	0.734
7	7	0.11
70	70	0.361
71	71	0.69
72	72	0.434
73	73	0.393
74	74	0.246
75	75	0.726
76	76	0.955
77	77	0.212
78	78	0.102
79	79	0.0857
8	8	0.695
80	80	0.798
81	81	0.37
82	82	0.472
83	83	0.0952
84	84	0.38
85	85	0.265
86	86	0.473
87	87	0.373
88	88	0.559
89	89	0.787
9	9	0.552
90	90	0.656
91	91	0.568
92	92	0.541
93	93	0.783
94	94	0.787
95	95	0.738
96	96	0.909
97	97	0.484
98	98	0.105
99	99	0.0143

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11913

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000253 human fibroblast- skin dystrophia myotonica sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)

DOID: Disease
4 (disease)
17 (musculoskeletal system disease)
450 (myotonic disease)
7 (disease of anatomical entity)
66 (muscle tissue disease)
423 (myopathy)
0080000 (muscular disease)
11722 (myotonic dystrophy)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002097 (skin of body)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000250 (human fibroblast of skin sample)
0000001 (sample)
0000253 (human fibroblast- skin dystrophia myotonica sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr1:197886461..197886558,+!p1@LHX9!2.50!312.35!LHX9;;chr15:57511609..57511651,+!p2@TCF12!1.81!105.01!TCF12;;chr7:19157248..19157268,-!p1@TWIST1!1.56!95.74!TWIST1;;chr4:174451370..174451387,-!p1@HAND2!1.54!33.90!HAND2;;chr2:239756739..239756755,+!p2@TWIST2!1.47!47.82!TWIST2;;chr9:132427972..132428056,+!p1@PRRX2!1.47!36.69!PRRX2;;chr9:132427883..132427951,+!p2@PRRX2!1.45!26.90!PRRX2;;chr10:119303078..119303169,+!p2@EMX2!1.45!26.90!EMX2;;chr2:239756671..239756732,+!p1@TWIST2!1.44!82.34!TWIST2;;chr1:170632285..170632309,+!p1@PRRX1!1.44!29.68!PRRX1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.39!23.29!HOXC5;;chr4:174450089..174450153,-!p2@HAND2!1.37!22.47!HAND2;;chr11:46299199..46299233,+!p1@CREB3L1!1.36!110.47!CREB3L1;;chr1:170633348..170633399,+!p2@PRRX1!1.31!26.07!PRRX1;;chr19:13134772..13134822,+!p2@NFIX!1.27!26.07!NFIX;;chr5:2751762..2751784,-!p1@IRX2!1.20!14.74!IRX2;;chr5:72744594..72744609,-!p1@FOXD1!1.17!63.27!FOXD1;;chr8:93074803..93074845,-!p1@RUNX1T1!1.17!13.91!RUNX1T1;;chr15:83953397..83953425,-!p1@BNC1!1.11!13.60!BNC1;;chr21:36260773..36260804,-!p7@RUNX1!1.09!15.15!RUNX1;;chr16:86544113..86544145,+!p1@FOXF1!1.09!13.91!FOXF1;;chr1:197886665..197886732,+!p3@LHX9!1.05!10.31!LHX9;;chr10:28034739..28034756,-!p1@MKX!1.04!10.00!MKX;;chr1:170633262..170633285,+!p3@PRRX1!1.03!11.03!PRRX1;;chr20:51588873..51588953,+!p1@TSHZ2!1.02!12.47!TSHZ2;;chr20:55204351..55204377,+!p1@TFAP2C!1.02!12.06!TFAP2C;;chr5:72744445..72744466,-!p2@FOXD1!1.00!15.15!FOXD1;;chrY:21906594..21906622,-!p1@KDM5D!0.99!8.86!KDM5D;;chr2:176994408..176994492,+!p1@HOXD8!0.99!8.86!HOXD8;;chr1:197886421..197886432,+!p2@LHX9!0.98!8.66!LHX9;;chrY:2803415..2803468,+!p1@ZFY!0.98!8.55!ZFY;;chr5:2751785..2751808,-!p2@IRX2!0.98!8.45!IRX2;;chr8:93074848..93074871,-!p3@RUNX1T1!0.98!8.45!RUNX1T1;;chr3:157823517..157823562,-!p1@SHOX2!0.95!8.55!SHOX2;;chr10:119302232..119302265,+!p1@EMX2!0.95!7.94!EMX2;;chr7:44143925..44143970,+!p1@AEBP1!0.94!176.84!AEBP1;;chr7:27224842..27224872,-!p1@HOXA11!0.94!7.73!HOXA11;;chr1:170632959..170632987,+!p4@PRRX1!0.93!8.24!PRRX1;;chr6:134210243..134210257,+!p1@TCF21!0.93!7.42!TCF21;;chr10:63809106..63809127,+!p1@ARID5B!0.92!103.67!ARID5B;;chr11:46299539..46299620,+!p2@CREB3L1!0.92!12.78!CREB3L1;;chr7:27205136..27205164,-!p1@HOXA9!0.91!7.21!HOXA9;;chr15:37392616..37392638,-!p2@MEIS2!0.90!22.47!MEIS2;;chr14:24837368..24837401,+!p1@NFATC4!0.90!17.11!NFATC4;;chr2:102091566..102091581,-!p1@RFX8!0.90!6.90!RFX8;;chr2:176969228..176969260,+!p1@HOXD11!0.90!6.90!HOXD11;;chr12:53614115..53614154,-!p1@RARG!0.89!38.03!RARG;;chr18:22932080..22932170,-!p1@ZNF521!0.89!30.19!ZNF521;;chr15:37390850..37390909,-!p3@MEIS2!0.89!13.60!MEIS2;;chr10:31610110..31610159,+!p2@ZEB1!0.89!6.80!ZEB1;;chr17:46682321..46682362,-!p1@HOXB6!0.89!6.70!HOXB6;;chr5:321810..321877,+!p1@AHRR!0.88!21.64!AHRR;;chr7:27205106..27205134,-!p2@HOXA9!0.88!6.60!HOXA9;;chr2:19558373..19558392,-!p1@OSR1!0.87!18.24!OSR1;;chr15:57511589..57511608,+!p4@TCF12!0.87!6.49!TCF12;;chr12:54402745..54402788,+!p1@HOXC8!0.87!6.49!HOXC8;;chr7:27192185..27192209,-!p1@HOXA3!0.86!6.29!HOXA3;;chr11:65687362..65687436,+!p3@DRAP1!0.85!29.58!DRAP1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.85!6.08!HOXC5;;chr3:147111231..147111281,+!p3@ZIC1!0.85!6.08!ZIC1;;chr7:27224795..27224840,-!p2@HOXA11!0.85!6.08!HOXA11;;chr19:13135386..13135435,+!p4@NFIX!0.84!5.98!NFIX;;chr11:65686732..65686756,+!p2@DRAP1!0.83!26.07!DRAP1;;chr3:141121847..141121868,+!p5@ZBTB38!0.83!9.07!ZBTB38;;chr3:147111198..147111225,+!p4@ZIC1!0.83!5.77!ZIC1;;chr7:42276787..42276815,-!p1@GLI3!0.82!15.87!GLI3;;chr1:170632250..170632277,+!p7@PRRX1!0.82!5.67!PRRX1;;chr8:67525443..67525459,-!p2@MYBL1!0.81!8.45!MYBL1;;chr16:31076332..31076388,-!p3@ZNF668!0.80!5.36!ZNF668;;chr3:128206762..128206781,-!p2@GATA2!0.79!34.83!GATA2;;chr10:63809013..63809041,+!p3@ARID5B!0.79!31.02!ARID5B;;chr18:53068911..53068935,-!p4@TCF4!0.79!5.98!TCF4;;chr3:21792585..21792625,-!p2@ZNF385D!0.79!5.87!ZNF385D;;chr2:96012397..96012417,+!p3@KCNIP3!0.79!5.15!KCNIP3;;chr3:138665937..138665968,-!p1@FOXL2!0.79!5.15!FOXL2;;chr15:37392724..37392757,-!p1@MEIS2!0.78!24.84!MEIS2;;chr1:158979872..158979898,+!p3@IFI16!0.78!16.80!IFI16;;chr7:44143978..44143989,+!p2@AEBP1!0.78!9.79!AEBP1;;chr7:14029283..14029311,-!p1@ETV1!0.77!28.55!ETV1;;chr11:65686802..65686818,+!p6@DRAP1!0.77!8.97!DRAP1;;chr22:19748231..19748317,+!p1@TBX1!0.77!4.95!TBX1;;chr5:3595977..3595999,+!p1@IRX1!0.77!4.84!IRX1;;chr1:158979792..158979814,+!p2@IFI16!0.76!49.77!IFI16;;chr1:170633058..170633084,+!p5@PRRX1!0.75!4.64!PRRX1;;chr19:13135582..13135600,+!p3@NFIX!0.75!4.64!NFIX;;chr8:49833948..49833973,-!p2@SNAI2!0.74!31.43!SNAI2;;chr15:42749722..42749739,-!p2@ZFP106!0.74!8.45!ZFP106;;chr6:100912785..100912822,-!p1@SIM1!0.74!4.53!SIM1;;chr10:31608127..31608156,+!p1@ZEB1!0.73!90.17!ZEB1;;chr4:4861385..4861398,+!p1@MSX1!0.73!14.12!MSX1;;chr11:65687222..65687240,+!p7@DRAP1!0.73!5.77!DRAP1;;chr7:44143997..44144008,+!p3@AEBP1!0.73!5.77!AEBP1;;chr5:142780189..1427802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TSHZ2!0.21!0.62!TSHZ2;;chr21:36260495..36260506,-!p23@RUNX1!0.21!0.62!RUNX1;;chr15:37391614..37391626,-!p18@MEIS2!0.21!0.62!MEIS2;;chr15:96869206..96869220,+!p21@NR2F2!0.21!0.62!NR2F2;;chr17:46675586..46675600,-!p6@HOXB6!0.21!0.62!HOXB6;;chr18:42260840..42260860,+!p2@SETBP1!0.21!0.62!SETBP1;;chr19:13135914..13135942,+!p19@NFIX!0.21!0.62!NFIX;;chr10:51565239..51565263,+!p2@NCOA4!0.20!33.29!NCOA4;;chr15:67358163..67358192,+!p1@SMAD3!0.20!32.87!SMAD3;;chr4:26322616..26322652,+!p1@RBPJ!0.20!31.02!RBPJ;;chr16:11891048..11891130,-!p1@ZC3H7A!0.20!27.82!ZC3H7A;;chr6:155635583..155635644,-!p1@TFB1M!0.20!18.14!TFB1M;;chr11:47236584..47236679,+!p1@DDB2!0.20!15.15!DDB2;;chr8:116681194..116681214,-!p1@TRPS1!0.20!12.78!TRPS1;;chr8:37553261..37553282,+!p2@ZNF703!0.20!10.41!ZNF703;;chr18:51750888..51750920,-!p3@MBD2!0.20!9.79!MBD2;;chr6:19837592..19837621,+!p1@ID4!0.20!8.04!ID4;;chr5:56247935..56247959,-!p1@MIER3!0.20!7.11!MIER3;;chr19:36545128..36545203,-!p1@THAP8!0.20!5.87!THAP8;;chr17:42296855..42296894,-!p4@UBTF!0.20!4.74!UBTF;;chr3:185826764..185826803,-!p2@ETV5!0.20!4.64!ETV5;;chr4:57775059..57775139,+!p2@REST!0.20!4.33!REST;;chr17:59477233..59477263,+!p1@TBX2!0.20!3.71!TBX2;;chr5:178487354..178487408,+!p1@ZNF354C!0.20!3.50!ZNF354C;;chr13:74708411..74708436,-!p3@KLF12!0.20!3.50!KLF12;;chr5:43121607..43121649,+!p4@ZNF131!0.20!3.30!ZNF131;;chr19:53636125..53636178,-!p1@ZNF415!0.20!3.30!ZNF415;;chr19:56152332..56152347,+!p4@ZNF580!0.20!2.47!ZNF580;;chr11:63684602..63684664,-!p1@RCOR2!0.20!2.06!RCOR2;;chr15:67358111..67358122,+!p6@SMAD3!0.20!1.65!SMAD3;;chr2:85981222..85981259,+!p2@ATOH8!0.20!1.55!ATOH8;;chr3:107244229..107244254,+!p3@BBX!0.20!1.55!BBX;;chr5:174151553..174151610,+!p1@MSX2!0.20!1.55!MSX2;;chr6:56954905..56954915,+!p4@ZNF451!0.20!1.44!ZNF451;;chr8:60031762..60031803,-!p3@TOX!0.20!1.24!TOX;;chr10:76585303..76585354,+!p4@KAT6B!0.20!1.24!KAT6B;;chr19:58987786..58987805,+!p3@ZNF446!0.20!1.24!ZNF446;;chr1:158979680..158979683,+!p9@IFI16!0.20!1.13!IFI16;;chr12:80083722..80083766,-!p12@PAWR!0.20!1.13!PAWR;;chr19:45260775..45260838,+!p5@BCL3!0.20!1.03!BCL3;;chr2:148779187..148779222,+!p5@MBD5!0.20!1.03!MBD5;;chr2:28616312..28616315,+!p8@FOSL2!0.20!0.82!FOSL2;;chr10:31288398..31288455,-!p2@ZNF438!0.20!0.82!ZNF438;;chr11:47237922..47237964,+!p4@DDB2!0.20!0.82!DDB2;;chr15:96869222..96869251,+!p18@NR2F2!0.20!0.82!NR2F2;;chr2:176032843..176032941,-!p1@ATF2!0.19!57.50!ATF2;;chr20:47894569..47894799,-!p1@ZNFX1!0.19!36.48!ZNFX1;;chr6:34204973..34204990,+!p4@HMGA1!0.19!17.93!HMGA1;;chr3:129158715..129158766,-!p2@MBD4!0.19!12.78!MBD4;;chr4:146402997..146403020,+!p1@SMAD1!0.19!9.27!SMAD1;;chr1:155532531..155532605,-!p1@ASH1L!0.19!8.86!ASH1L;;chr19:52901094..52901134,+!p1@ZNF528!0.19!8.55!ZNF528;;chr7:99156434..99156510,+!p2@ZNF655!0.19!7.73!ZNF655;;chrX:83757450..83757485,-!p1@HDX!0.19!5.36!HDX;;chr1:43148792..43148849,+!p2@YBX1!0.19!4.53!YBX1;;chr19:44645731..44645786,+!p2@ZNF226,p2@ZNF234!0.19!3.61!ZNF234;;chr19:36134528..36134563,+!p1@ETV2!0.19!3.19!ETV2;;chr12:96588368..96588394,+!p3@ELK3!0.19!2.99!ELK3;;chr2:208394728..208394739,+!p5@CREB1!0.19!2.37!CREB1;;chr7:21467802..21467840,+!p3@SP4!0.19!2.06!SP4;;chr12:133562945..133562958,+!p2@ZNF26!0.19!1.75!ZNF26;;chr19:58570605..58570655,+!p1@ZNF135!0.19!1.65!ZNF135;;chr19:47922750..47922795,-!p1@MEIS3!0.19!1.44!MEIS3;;chr10:21823381..21823399,+!p4@MLLT10!0.19!1.44!MLLT10;;chr6:27356745..27356777,+!p1@ZNF391!0.19!1.44!ZNF391;;chr13:27998871..27998884,+!p4@GTF3A!0.19!1.34!GTF3A;;chr15:96874216..96874236,+!p13@NR2F2!0.19!1.34!NR2F2;;chr3:33481687..33481713,-!p4@UBP1!0.19!1.34!UBP1;;chr2:214016496..214016544,-!p5@IKZF2!0.19!1.13!IKZF2;;chr3:107318157..107318172,+!p6@BBX!0.19!1.13!BBX;;chr19:52391220..52391251,-!p2@ZNF577!0.19!1.13!ZNF577;;chr6:42419290..42419314,-!p5@TRERF1!0.19!0.93!TRERF1;;chr19:47425425..47425441,+!p2@ARHGAP35!0.19!0.82!ARHGAP35;;chr19:59030961..59030974,-!p4@ZBTB45!0.19!0.72!ZBTB45;;chrX:48900871..48900890,-!p1@TFE3!0.18!70.90!TFE3;;chr12:56583243..56583293,-!p1@SMARCC2!0.18!32.98!SMARCC2;;chr1:59165724..59165751,-!p1@MYSM1!0.18!30.50!MYSM1;;chr1:14075903..14075940,+!p1@PRDM2!0.18!28.96!PRDM2;;chr20:39946279..39946356,-!p1@ZHX3!0.18!20.51!ZHX3;;chr19:36705998..36706021,+!p2@ZNF146!0.18!19.06!ZNF146;;chr12:95467359..95467417,-!p2@NR2C1!0.18!17.31!NR2C1;;chr7:28220198..28220269,-!p2@JAZF1!0.18!11.54!JAZF1;;chr19:20278012..20278034,+!p1@ZNF486!0.18!10.72!ZNF486;;chr12:133614062..133614117,+!p1@ZNF84!0.18!8.35!ZNF84;;chr15:50647370..50647405,-!p2@GABPB1!0.18!6.70!GABPB1;;chr19:12175535..12175554,+!p1@ZNF844!0.18!6.70!ZNF844;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.18!5.98!ZNF20;;chr2:95831529..95831569,+!p1@ZNF2!0.18!5.56!ZNF2;;chr3:187463179..187463201,-!p2@BCL6!0.18!4.84!BCL6;;chr3:141087393..141087426,+!p3@ZBTB38!0.18!4.74!ZBTB38;;chr10:44070016..44070069,-!p1@ZNF239!0.18!3.30!ZNF239;;chr7:99613250..99613264,+!p2@ZKSCAN1!0.18!3.19!ZKSCAN1;;chr6:106534230..106534254,+!p2@PRDM1!0.18!2.68!PRDM1;;chr19:40502938..40502987,+!p1@ZNF546!0.18!2.68!ZNF546;;chr6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1;;chrX:101975643..101975683,+!p1@BHLHB9!0.17!2.16!BHLHB9;;chr10:43932296..43932360,+!p1@ZNF487P!0.17!1.96!ZNF487P;;chr3:114343826..114343869,-!p4@ZBTB20!0.17!1.85!ZBTB20;;chr3:141820622..141820635,-!p5@TFDP2!0.17!1.55!TFDP2;;chr4:56413067..56413086,-!p4@CLOCK!0.17!1.55!CLOCK;;chr6:85474299..85474324,-!p1@TBX18!0.17!1.55!TBX18;;chr1:151043070..151043110,+!p3@GABPB2!0.17!1.34!GABPB2;;chr3:71632743..71632756,-!p16@FOXP1!0.17!1.24!FOXP1;;chr12:56401175..56401225,+!p3@IKZF4!0.17!1.13!IKZF4;;chr16:4365715..4365746,+!p@chr16:4365715..4365746,+!0.17!0.93!GLIS2;;chr2:46602901..46602926,+!p7@EPAS1!0.17!0.93!EPAS1;;chr4:1873216..1873238,+!p5@WHSC1!0.17!0.93!WHSC1;;chr19:57078386..57078407,+!p3@ZNF470!0.17!0.93!ZNF470;;chr15:67358269..67358272,+!p15@SMAD3!0.17!0.82!SMAD3;;chr10:63851669..63851682,+!p10@ARID5B!0.17!0.62!ARID5B;;chr2:121493717..121493755,+!p3@GLI2!0.17!0.62!GLI2;;chr3:71179785..71179810,-!p23@FOXP1!0.17!0.62!FOXP1;;chr5:138629417..138629446,+!p1@MATR3!0.16!120.98!MATR3;;chr2:178129414..178129517,-!p1@NFE2L2!0.16!51.22!NFE2L2;;chr11:128392085..128392232,-!p1@ETS1!0.16!43.69!ETS1;;chr14:21945335..21945419,+!p1@TOX4!0.16!33.49!TOX4;;chr7:106809432..106809455,+!p1@HBP1!0.16!24.94!HBP1;;chr14:74353530..74353571,+!p1@ZNF410!0.16!23.81!ZNF410;;chr6:35464817..35464894,-!p1@TEAD3!0.16!19.37!TEAD3;;chr18:32870148..32870223,-!p1@ZSCAN30!0.16!8.55!ZSCAN30;;chr12:27485785..27485816,+!p1@ARNTL2!0.16!8.35!ARNTL2;;chr15:67357924..67357952,+!p2@SMAD3!0.16!8.04!SMAD3;;chr1:38325256..38325280,-!p1@MTF1!0.16!7.32!MTF1;;chr4:146859927..146860055,-!p1@ZNF827!0.16!7.11!ZNF827;;chr2:85360499..85360598,+!p1@TCF7L1!0.16!6.60!TCF7L1;;chr3:44519131..44519186,-!p1@ZNF445!0.16!6.60!ZNF445;;chr14:74226747..74226779,-!p3@C14orf43!0.16!6.60!C14orf43;;chr4:140005341..140005411,-!p3@ELF2!0.16!6.29!ELF2;;chr19:53836985..53837024,+!p1@ZNF845!0.16!5.67!ZNF845;;chr3:44596679..44596726,+!p1@ZNF167!0.16!4.95!ZNF167;;chr17:56065729..56065781,-!p2@VEZF1!0.16!4.84!VEZF1;;chr1:8483878..8483907,-!p4@RERE!0.16!4.33!RERE;;chr19:44439387..44439419,-!p2@ZNF45!0.16!4.12!ZNF45;;chr19:53758094..53758147,-!p1@ZNF677!0.16!4.12!ZNF677;;chr3:63897742..63897797,+!p2@ATXN7!0.16!3.61!ATXN7;;chr6:126102292..126102329,+!p3@NCOA7!0.16!3.50!NCOA7;;chr3:169490562..169490605,+!p2@MYNN!0.16!3.40!MYNN;;chr16:29819446..29819471,+!p9@MAZ!0.16!3.09!MAZ;;chr5:34929947..34930005,+!p3@DNAJC21!0.16!2.99!DNAJC21;;chr3:52001426..52001447,-!p3@PCBP4!0.16!2.89!PCBP4;;chr4:1873155..1873185,+!p3@WHSC1!0.16!2.89!WHSC1;;chr2:148778973..148779035,+!p3@MBD5!0.16!2.58!MBD5;;chr1:23694697..23694756,-!p3@ZNF436!0.16!2.16!ZNF436;;chr4:144435112..144435176,+!p3@SMARCA5!0.16!1.85!SMARCA5;;chr11:9482521..9482533,+!p2@ZNF143!0.16!1.65!ZNF143;;chr3:40566488..40566502,+!p3@ZNF621!0.16!1.55!ZNF621;;chr8:182368..182402,+!p2@ZNF596!0.16!1.55!ZNF596;;chr3:71630690..71630750,-!p11@FOXP1!0.16!1.34!FOXP1;;chr6:42419316..42419340,-!p4@TRERF1!0.16!1.13!TRERF1;;chr17:38792325..38792330,-!p3@SMARCE1!0.16!1.03!SMARCE1;;chrX:66763856..66763896,+!p1@AR!0.16!1.03!AR;;chrX:129402754..129402766,-!p3@ZNF280C!0.16!0.93!ZNF280C;;chr11:6947647..6947698,+!p2@ZNF215!0.16!0.93!ZNF215;;chr12:66218443..66218461,+!p8@HMGA2!0.16!0.82!HMGA2;;chr22:29196030..29196075,-!p5@XBP1!0.16!0.82!XBP1;;chr2:231077626..231077651,-!p6@SP110!0.16!0.82!SP110;;chr19:50431973..50431998,+!p5@ATF5!0.16!0.82!ATF5;;chr21:36231861..36231877,-!p12@RUNX1!0.16!0.82!RUNX1;;chr5:124082279..124082319,-!p3@ZNF608!0.16!0.72!ZNF608;;
+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002620;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002097;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002416
 |ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=

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FF:11560-120D3: Difference between revisions

From FANTOM5_SSTAR

Revision as of 15:24, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0