FFCP PHASE1:Hg19::chr9:130911770..130911779,+
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| Short description: | p2@LCN2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_LCN2_5end |
| Coexpression cluster: | C484_squamous_pharyngeal_bile_transitionalcell_Prostate_signet_trachea |
| Association with transcript: | -17bp_to_ENST00000372998_5end |
| EntrezGene: | LCN2 |
| HGNC: | 6526 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p2@LCN2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 8.12e-23 | 253 |
| endodermal cell | 2.27e-20 | 58 |
| endo-epithelial cell | 2.45e-20 | 42 |
| epithelial cell of alimentary canal | 1.30e-11 | 20 |
| squamous epithelial cell | 1.72e-07 | 63 |
| epithelial cell of stomach | 2.01e-07 | 3 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 3.89e-22 | 160 |
| endoderm | 3.89e-22 | 160 |
| presumptive endoderm | 3.89e-22 | 160 |
| digestive system | 3.00e-20 | 145 |
| digestive tract | 3.00e-20 | 145 |
| primitive gut | 3.00e-20 | 145 |
| subdivision of digestive tract | 8.96e-17 | 118 |
| respiratory system | 2.93e-15 | 74 |
| foregut | 1.37e-13 | 87 |
| orifice | 9.21e-13 | 36 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 3.40e-23 | 14 |
| carcinoma | 2.24e-20 | 106 |
| adenocarcinoma | 2.52e-14 | 25 |
| cell type cancer | 3.57e-12 | 143 |
Showing 1 to 4 of 4 entries
