FFCP PHASE2:Hg19::chr1:28520359..28520379,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p3@PTAFR |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_PTAFR_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 4bp_to_ENST00000305392_5end |
| EntrezGene: | PTAFR |
| HGNC: | 9582 |
| UniProt: | P25105 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@PTAFR |
|---|
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 5.43e-29 | 253 |
| endo-epithelial cell | 3.23e-26 | 42 |
| endodermal cell | 5.54e-18 | 58 |
| respiratory epithelial cell | 2.71e-15 | 13 |
| general ecto-epithelial cell | 4.48e-11 | 14 |
| kidney tubule cell | 1.68e-09 | 10 |
| nephron tubule epithelial cell | 1.68e-09 | 10 |
| epithelial cell of tracheobronchial tree | 1.92e-09 | 9 |
| epithelial cell of lower respiratory tract | 1.92e-09 | 9 |
| epithelial cell of alimentary canal | 1.53e-08 | 20 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 6.14e-15 | 160 |
| endoderm | 6.14e-15 | 160 |
| presumptive endoderm | 6.14e-15 | 160 |
| respiratory system | 3.71e-11 | 74 |
| digestive system | 8.61e-11 | 145 |
| digestive tract | 8.61e-11 | 145 |
| primitive gut | 8.61e-11 | 145 |
| trunk region element | 8.42e-10 | 101 |
| urinary system structure | 1.04e-09 | 47 |
| nephron tubule epithelium | 1.68e-09 | 10 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 2.05e-15 | 14 |
| carcinoma | 1.92e-11 | 106 |
| adenocarcinoma | 2.90e-07 | 25 |
Showing 1 to 3 of 3 entries
