FFCP PHASE2:Hg19::chr20:9494967..9494972,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p16@LAMP5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_16_at_LAMP5_5end |
| Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
| Association with transcript: | -32bp_to_NM_001199897, NM_012261_5end |
| EntrezGene: | LAMP5 |
| HGNC: | 16097 |
| UniProt: | Q9UJQ1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p16@LAMP5 |
|---|
0
1
2
3
4
5
6
7
8
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| corpus striatum | 1.56e-74 | 4 |
| striatum | 1.56e-74 | 4 |
| ventral part of telencephalon | 1.56e-74 | 4 |
| future corpus striatum | 1.56e-74 | 4 |
| limbic system | 2.01e-59 | 5 |
| basal ganglion | 8.65e-59 | 9 |
| nuclear complex of neuraxis | 8.65e-59 | 9 |
| aggregate regional part of brain | 8.65e-59 | 9 |
| collection of basal ganglia | 8.65e-59 | 9 |
| cerebral subcortex | 8.65e-59 | 9 |
Showing 1 to 10 of 54 entries
