FFCP PHASE2:Hg19::chr6:152957944..152957985,-
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| Short description: | p7@SYNE1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_SYNE1_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | 0bp_to_ENST00000423061, NM_033071, uc003qot.3_5end |
| EntrezGene: | SYNE1 |
| HGNC: | 17089 |
| UniProt: | Q8NF91 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p7@SYNE1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CD8-positive, alpha-beta T cell | 1.13e-10 | 11 |
| natural killer cell | 6.15e-08 | 3 |
| pro-NK cell | 6.15e-08 | 3 |
| mature alpha-beta T cell | 2.17e-07 | 18 |
| alpha-beta T cell | 2.17e-07 | 18 |
| immature T cell | 2.17e-07 | 18 |
| mature T cell | 2.17e-07 | 18 |
| immature alpha-beta T cell | 2.17e-07 | 18 |
| neutrophil | 2.63e-07 | 3 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 6.98e-60 | 56 |
| neural rod | 6.98e-60 | 56 |
| future spinal cord | 6.98e-60 | 56 |
| neural keel | 6.98e-60 | 56 |
| regional part of nervous system | 5.36e-58 | 53 |
| regional part of brain | 5.36e-58 | 53 |
| adult organism | 2.43e-55 | 114 |
| brain | 5.64e-49 | 68 |
| future brain | 5.64e-49 | 68 |
| central nervous system | 1.87e-45 | 81 |
Showing 1 to 10 of 73 entries
