FFCP PHASE1:Hg19::chr1:10057249..10057268,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!1.53e-23!42;CL:0000860!2.78e-20!45;CL:0000766!1.15e-16!76;CL:0002194!2.09e-15!63;CL:0000576!2.09e-15!63;CL:0000040!2.09e-15!63;CL:0000559!2.09e-15!63;CL:0002009!1.06e-14!65;CL:0000839!1.81e-11!70;CL:0000557!1.95e-11!71 | |ontology_enrichment_celltype=CL:0002057!1.53e-23!42;CL:0000860!2.78e-20!45;CL:0000766!1.15e-16!76;CL:0002194!2.09e-15!63;CL:0000576!2.09e-15!63;CL:0000040!2.09e-15!63;CL:0000559!2.09e-15!63;CL:0002009!1.06e-14!65;CL:0000839!1.81e-11!70;CL:0000557!1.95e-11!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.46e-20;33!CL:0002057;8.46e-20;33!CL:0000576;1.03e-16;48!CL:0000473;1.62e-16;39!CL:0000234;1.62e-16;39!CL:0000766;1.28e-12;69!CL:0000094;4.39e-08;8!CL:1000507;1.35e-07;10!CL:1000494;1.35e-07;10 | |ontology_enrichment_celltype_v019=CL:0000860;8.46e-20;33!CL:0002057;8.46e-20;33!CL:0000576;1.03e-16;48!CL:0000473;1.62e-16;39!CL:0000234;1.62e-16;39!CL:0000766;1.28e-12;69!CL:0000094;4.39e-08;8!CL:1000507;1.35e-07;10!CL:1000494;1.35e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.66e-29,42;CL:0002057,9.66e-29,42;CL:0000473,4.53e-28,48;CL:0000234,4.53e-28,48;CL:0000766,1.05e-23,72;CL:0002194,4.10e-21,59;CL:0000576,4.10e-21,59;CL:0000040,4.10e-21,59;CL:0000559,4.10e-21,59;CL:0002009,8.33e-20,61;CL:0000839,6.40e-17,66;CL:0000557,2.12e-16,67;CL:0000763,1.40e-09,108;CL:0000049,1.40e-09,108;CL:0002393,3.98e-08,9;CL:0002397,3.98e-08,9;CL:0000094,4.35e-08,8;CL:1000507,1.30e-07,10;CL:1000494,1.30e-07,10;CL:1000449,9.86e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;1.42e-20;42 | |ontology_enrichment_development_v019=CL:0002057;1.42e-20;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-28!115;UBERON:0000062!1.00e-13!511;UBERON:0000922!1.24e-12!612;UBERON:0002050!2.22e-11!605;UBERON:0005423!2.22e-11!605;UBERON:0000468!2.54e-11!659;UBERON:0000923!4.53e-11!604;UBERON:0005291!4.53e-11!604;UBERON:0006598!4.53e-11!604;UBERON:0002532!4.53e-11!604;UBERON:0000467!6.38e-11!625;UBERON:0000480!9.86e-11!626;UBERON:0002390!2.33e-10!102;UBERON:0003061!2.33e-10!102;UBERON:0002193!3.60e-10!112;UBERON:0003075!4.76e-10!86;UBERON:0007284!4.76e-10!86;UBERON:0001049!3.25e-09!57;UBERON:0005068!3.25e-09!57;UBERON:0006241!3.25e-09!57;UBERON:0007135!3.25e-09!57;UBERON:0002346!6.61e-09!90;UBERON:0001474!2.81e-08!86;UBERON:0002371!2.94e-08!80;UBERON:0005743!4.24e-08!86;UBERON:0000073!5.19e-08!94;UBERON:0001016!5.19e-08!94;UBERON:0003080!9.58e-08!42;UBERON:0002616!1.31e-07!59;UBERON:0003056!1.67e-07!61;UBERON:0002780!3.00e-07!41;UBERON:0001890!3.00e-07!41;UBERON:0006240!3.00e-07!41;UBERON:0000033!6.67e-07!123;UBERON:0001017!6.82e-07!82;UBERON:0000153!7.06e-07!129;UBERON:0007811!7.06e-07!129;UBERON:0004765!7.30e-07!101;UBERON:0001434!7.30e-07!101 | |ontology_enrichment_uberon=UBERON:0007023!1.43e-28!115;UBERON:0000062!1.00e-13!511;UBERON:0000922!1.24e-12!612;UBERON:0002050!2.22e-11!605;UBERON:0005423!2.22e-11!605;UBERON:0000468!2.54e-11!659;UBERON:0000923!4.53e-11!604;UBERON:0005291!4.53e-11!604;UBERON:0006598!4.53e-11!604;UBERON:0002532!4.53e-11!604;UBERON:0000467!6.38e-11!625;UBERON:0000480!9.86e-11!626;UBERON:0002390!2.33e-10!102;UBERON:0003061!2.33e-10!102;UBERON:0002193!3.60e-10!112;UBERON:0003075!4.76e-10!86;UBERON:0007284!4.76e-10!86;UBERON:0001049!3.25e-09!57;UBERON:0005068!3.25e-09!57;UBERON:0006241!3.25e-09!57;UBERON:0007135!3.25e-09!57;UBERON:0002346!6.61e-09!90;UBERON:0001474!2.81e-08!86;UBERON:0002371!2.94e-08!80;UBERON:0005743!4.24e-08!86;UBERON:0000073!5.19e-08!94;UBERON:0001016!5.19e-08!94;UBERON:0003080!9.58e-08!42;UBERON:0002616!1.31e-07!59;UBERON:0003056!1.67e-07!61;UBERON:0002780!3.00e-07!41;UBERON:0001890!3.00e-07!41;UBERON:0006240!3.00e-07!41;UBERON:0000033!6.67e-07!123;UBERON:0001017!6.82e-07!82;UBERON:0000153!7.06e-07!129;UBERON:0007811!7.06e-07!129;UBERON:0004765!7.30e-07!101;UBERON:0001434!7.30e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.00e-09;114!UBERON:0004211;1.35e-07;10!UBERON:0009773;1.35e-07;10!UBERON:0001231;1.35e-07;10!UBERON:0004810;1.35e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0007023;6.00e-09;114!UBERON:0004211;1.35e-07;10!UBERON:0009773;1.35e-07;10!UBERON:0001231;1.35e-07;10!UBERON:0004810;1.35e-07;10 | ||
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| ||
|short_description=p2@RBP7 | |short_description=p2@RBP7 | ||
}} | }} |
Revision as of 12:20, 17 November 2012
Short description: | p2@RBP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RBP7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000315901, NM_052960, uc001aqq.2, uc009vms.2_5end |
EntrezGene: | RBP7 |
HGNC: | 30316 |
UniProt: | B1AQ60Q96R05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.66e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.66e-29 | 42 |
defensive cell | 4.53e-28 | 48 |
phagocyte | 4.53e-28 | 48 |
myeloid leukocyte | 1.05e-23 | 72 |
monopoietic cell | 4.10e-21 | 59 |
monocyte | 4.10e-21 | 59 |
monoblast | 4.10e-21 | 59 |
promonocyte | 4.10e-21 | 59 |
macrophage dendritic cell progenitor | 8.33e-20 | 61 |
myeloid lineage restricted progenitor cell | 6.40e-17 | 66 |
granulocyte monocyte progenitor cell | 2.12e-16 | 67 |
myeloid cell | 1.40e-09 | 108 |
common myeloid progenitor | 1.40e-09 | 108 |
intermediate monocyte | 3.98e-08 | 9 |
CD14-positive, CD16-positive monocyte | 3.98e-08 | 9 |
granulocyte | 4.35e-08 | 8 |
kidney tubule cell | 1.30e-07 | 10 |
nephron tubule epithelial cell | 1.30e-07 | 10 |
epithelial cell of nephron | 9.86e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.38e-30 | 114 |
hematopoietic system | 5.07e-16 | 98 |
blood island | 5.07e-16 | 98 |
hemolymphoid system | 8.95e-15 | 108 |
bone marrow | 5.19e-13 | 76 |
bone element | 2.52e-12 | 82 |
skeletal element | 5.28e-11 | 90 |
immune system | 6.14e-11 | 93 |
embryo | 1.44e-09 | 592 |
developing anatomical structure | 5.26e-09 | 581 |
skeletal system | 9.79e-09 | 100 |
nephron tubule epithelium | 1.30e-07 | 10 |
neural plate | 4.33e-07 | 82 |
presumptive neural plate | 4.33e-07 | 82 |
excretory tube | 4.45e-07 | 16 |
kidney epithelium | 4.45e-07 | 16 |
cavitated compound organ | 7.86e-07 | 31 |
kidney | 8.46e-07 | 26 |
kidney mesenchyme | 8.46e-07 | 26 |
upper urinary tract | 8.46e-07 | 26 |
kidney rudiment | 8.46e-07 | 26 |
kidney field | 8.46e-07 | 26 |
nephron epithelium | 9.86e-07 | 15 |
renal tubule | 9.86e-07 | 15 |
nephron tubule | 9.86e-07 | 15 |
nephron | 9.86e-07 | 15 |
uriniferous tubule | 9.86e-07 | 15 |
nephrogenic mesenchyme | 9.86e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.