FFCP PHASE1:Hg19::chr17:39912021..39912046,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.77e-24!254;CL:0002076!1.42e-09!43;CL:0000223!1.36e-08!59 | |ontology_enrichment_celltype=CL:0000066!1.77e-24!254;CL:0002076!1.42e-09!43;CL:0000223!1.36e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002231;4.13e-12;3!CL:0002159;9.72e-10;14!CL:0000244;1.23e-09;4!CL:0000731;1.23e-09;4!CL:1000746;1.82e-09;7!CL:1000612;1.82e-09;7!CL:0000575;4.00e-09;2!CL:0002536;2.13e-08;2!CL:0002188;4.43e-08;5!CL:0000622;5.41e-08;5 | |ontology_enrichment_celltype_v019=CL:0002231;4.13e-12;3!CL:0002159;9.72e-10;14!CL:0000244;1.23e-09;4!CL:0000731;1.23e-09;4!CL:1000746;1.82e-09;7!CL:1000612;1.82e-09;7!CL:0000575;4.00e-09;2!CL:0002536;2.13e-08;2!CL:0002188;4.43e-08;5!CL:0000622;5.41e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.81e-12,3;CL:0000066,2.55e-12,253;CL:0000244,8.94e-10,4;CL:0000731,8.94e-10,4;CL:0002159,1.18e-09,14;CL:1000746,2.43e-09,7;CL:1000612,2.43e-09,7;CL:0000575,3.57e-09,2;CL:0002188,4.15e-08,5;CL:0002536,5.07e-08,2;CL:0000622,5.76e-08,5;CL:0000223,4.62e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.99e-13!169;UBERON:0000925!3.99e-13!169;UBERON:0006595!3.99e-13!169;UBERON:0006554!7.22e-11!44;UBERON:0001008!2.29e-10!45;UBERON:0001007!3.63e-09!155;UBERON:0001555!3.63e-09!155;UBERON:0007026!3.63e-09!155;UBERON:0000467!3.26e-08!625;UBERON:0000480!4.23e-08!626;UBERON:0000062!5.67e-08!511;UBERON:0000064!7.38e-08!219;UBERON:0000468!8.62e-08!659;UBERON:0000080!1.48e-07!18;UBERON:0002120!1.48e-07!18;UBERON:0004875!1.48e-07!18;UBERON:0005721!1.48e-07!18;UBERON:0005754!1.48e-07!18;UBERON:0007297!1.48e-07!18;UBERON:0004921!1.54e-07!129;UBERON:0004185!1.54e-07!129;UBERON:0004876!1.64e-07!20;UBERON:0000922!1.87e-07!612;UBERON:0002113!2.60e-07!27;UBERON:0003918!2.60e-07!27;UBERON:0005095!2.60e-07!27;UBERON:0007687!2.60e-07!27;UBERON:0003064!2.83e-07!37;UBERON:0001737!2.96e-07!9;UBERON:0001004!3.36e-07!72;UBERON:0006555!3.96e-07!17;UBERON:0005103!3.96e-07!17;UBERON:0000083!3.96e-07!17;UBERON:0009201!3.96e-07!17;UBERON:0004819!3.96e-07!17;UBERON:0006553!3.96e-07!17;UBERON:0003074!3.96e-07!17;UBERON:0003060!3.96e-07!17;UBERON:0002050!5.17e-07!605;UBERON:0005423!5.17e-07!605;UBERON:0000923!8.60e-07!604;UBERON:0005291!8.60e-07!604;UBERON:0006598!8.60e-07!604;UBERON:0002532!8.60e-07!604 | |ontology_enrichment_uberon=UBERON:0004119!3.99e-13!169;UBERON:0000925!3.99e-13!169;UBERON:0006595!3.99e-13!169;UBERON:0006554!7.22e-11!44;UBERON:0001008!2.29e-10!45;UBERON:0001007!3.63e-09!155;UBERON:0001555!3.63e-09!155;UBERON:0007026!3.63e-09!155;UBERON:0000467!3.26e-08!625;UBERON:0000480!4.23e-08!626;UBERON:0000062!5.67e-08!511;UBERON:0000064!7.38e-08!219;UBERON:0000468!8.62e-08!659;UBERON:0000080!1.48e-07!18;UBERON:0002120!1.48e-07!18;UBERON:0004875!1.48e-07!18;UBERON:0005721!1.48e-07!18;UBERON:0005754!1.48e-07!18;UBERON:0007297!1.48e-07!18;UBERON:0004921!1.54e-07!129;UBERON:0004185!1.54e-07!129;UBERON:0004876!1.64e-07!20;UBERON:0000922!1.87e-07!612;UBERON:0002113!2.60e-07!27;UBERON:0003918!2.60e-07!27;UBERON:0005095!2.60e-07!27;UBERON:0007687!2.60e-07!27;UBERON:0003064!2.83e-07!37;UBERON:0001737!2.96e-07!9;UBERON:0001004!3.36e-07!72;UBERON:0006555!3.96e-07!17;UBERON:0005103!3.96e-07!17;UBERON:0000083!3.96e-07!17;UBERON:0009201!3.96e-07!17;UBERON:0004819!3.96e-07!17;UBERON:0006553!3.96e-07!17;UBERON:0003074!3.96e-07!17;UBERON:0003060!3.96e-07!17;UBERON:0002050!5.17e-07!605;UBERON:0005423!5.17e-07!605;UBERON:0000923!8.60e-07!604;UBERON:0005291!8.60e-07!604;UBERON:0006598!8.60e-07!604;UBERON:0002532!8.60e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.82e-09;7!UBERON:0001229;1.82e-09;7!UBERON:0005631;4.30e-09;10!UBERON:0000158;4.30e-09;10!UBERON:0000305;1.14e-08;7!UBERON:0000365;8.70e-08;5!UBERON:0006554;3.22e-07;30!UBERON:0001008;3.22e-07;30 | |ontology_enrichment_uberon_v019=UBERON:0000074;1.82e-09;7!UBERON:0001229;1.82e-09;7!UBERON:0005631;4.30e-09;10!UBERON:0000158;4.30e-09;10!UBERON:0000305;1.14e-08;7!UBERON:0000365;8.70e-08;5!UBERON:0006554;3.22e-07;30!UBERON:0001008;3.22e-07;30 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,1.57e-09,47;UBERON:0010532,2.43e-09,7;UBERON:0000074,2.43e-09,7;UBERON:0001229,2.43e-09,7;UBERON:0001230,2.43e-09,7;UBERON:0003220,2.43e-09,7;UBERON:0005749,2.43e-09,7;UBERON:0004199,2.43e-09,7;UBERON:0004209,2.43e-09,7;UBERON:0004198,2.43e-09,7;UBERON:0001008,2.80e-09,48;UBERON:0005631,4.05e-09,14;UBERON:0000158,4.05e-09,14;UBERON:0000305,1.07e-08,7;UBERON:0005103,3.57e-08,8;UBERON:0000083,3.57e-08,8;UBERON:0009201,3.57e-08,8;UBERON:0006553,3.57e-08,8;UBERON:0003074,3.57e-08,8;UBERON:0003060,3.57e-08,8;UBERON:0000365,6.78e-08,5;UBERON:0004871,1.29e-07,8;UBERON:0000080,2.89e-07,9;UBERON:0002120,2.89e-07,9;UBERON:0004875,2.89e-07,9;UBERON:0005721,2.89e-07,9;UBERON:0005754,2.89e-07,9;UBERON:0007297,2.89e-07,9;UBERON:0004119,3.45e-07,160;UBERON:0000925,3.45e-07,160;UBERON:0006595,3.45e-07,160;UBERON:0000058,6.02e-07,19 | |||
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| ||
|short_description=p@chr17:39912021..39912046,- | |short_description=p@chr17:39912021..39912046,- | ||
}} | }} |
Revision as of 07:25, 19 November 2012
Short description: | p@chr17:39912021..39912046, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39912021..39912046, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.81e-12 | 3 |
epithelial cell | 2.55e-12 | 253 |
transitional epithelial cell | 8.94e-10 | 4 |
urothelial cell | 8.94e-10 | 4 |
general ecto-epithelial cell | 1.18e-09 | 14 |
glomerular cell | 2.43e-09 | 7 |
kidney corpuscule cell | 2.43e-09 | 7 |
corneal epithelial cell | 3.57e-09 | 2 |
glomerular endothelial cell | 4.15e-08 | 5 |
amniotic epithelial cell | 5.07e-08 | 2 |
acinar cell | 5.76e-08 | 5 |
endodermal cell | 4.62e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 1.57e-09 | 47 |
primitive nephron | 2.43e-09 | 7 |
renal glomerulus | 2.43e-09 | 7 |
renal corpuscle | 2.43e-09 | 7 |
glomerular capsule | 2.43e-09 | 7 |
metanephric mesenchyme | 2.43e-09 | 7 |
glomerular tuft | 2.43e-09 | 7 |
S-shaped body | 2.43e-09 | 7 |
renal vesicle | 2.43e-09 | 7 |
comma-shaped body | 2.43e-09 | 7 |
renal system | 2.80e-09 | 48 |
extraembryonic membrane | 4.05e-09 | 14 |
membranous layer | 4.05e-09 | 14 |
amnion | 1.07e-08 | 7 |
mesonephric epithelium | 3.57e-08 | 8 |
mesonephric tubule | 3.57e-08 | 8 |
nephric duct | 3.57e-08 | 8 |
renal duct | 3.57e-08 | 8 |
mesonephric duct | 3.57e-08 | 8 |
pronephric duct | 3.57e-08 | 8 |
urothelium | 6.78e-08 | 5 |
somatic layer of lateral plate mesoderm | 1.29e-07 | 8 |
mesonephros | 2.89e-07 | 9 |
pronephros | 2.89e-07 | 9 |
nephrogenic cord | 2.89e-07 | 9 |
pronephric mesoderm | 2.89e-07 | 9 |
rostral part of nephrogenic cord | 2.89e-07 | 9 |
presumptive pronephric mesoderm | 2.89e-07 | 9 |
endoderm-derived structure | 3.45e-07 | 160 |
endoderm | 3.45e-07 | 160 |
presumptive endoderm | 3.45e-07 | 160 |
duct | 6.02e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.