FFCP PHASE1:Hg19::chr12:25205628..25205657,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!2.08e-80!172;CL:0000566!2.08e-80!172;CL:0002032!1.68e-75!165;CL:0000837!1.68e-75!165;CL:0000988!1.17e-73!182;CL:0000738!6.94e-67!140;CL:0002031!3.52e-55!124;CL:0002087!7.54e-53!119;CL:0000763!8.42e-53!112;CL:0000049!8.42e-53!112;CL:0000766!3.16e-40!76;CL:0000557!1.29e-35!71;CL:0000839!1.78e-34!70;CL:0002009!2.35e-32!65;CL:0002194!4.43e-31!63;CL:0000576!4.43e-31!63;CL:0000040!4.43e-31!63;CL:0000559!4.43e-31!63;CL:0002057!2.44e-28!42;CL:0000860!7.42e-26!45;CL:0000945!1.75e-19!24;CL:0000826!1.75e-19!24;CL:0000542!1.09e-18!53;CL:0000051!1.09e-18!53;CL:0000838!5.18e-18!52;CL:0000236!1.06e-12!14;CL:0000134!7.67e-11!358;CL:0002320!9.32e-10!365;CL:0002393!6.50e-08!9;CL:0002397!6.50e-08!9;CL:0000094!1.04e-07!8 | |ontology_enrichment_celltype=CL:0000037!2.08e-80!172;CL:0000566!2.08e-80!172;CL:0002032!1.68e-75!165;CL:0000837!1.68e-75!165;CL:0000988!1.17e-73!182;CL:0000738!6.94e-67!140;CL:0002031!3.52e-55!124;CL:0002087!7.54e-53!119;CL:0000763!8.42e-53!112;CL:0000049!8.42e-53!112;CL:0000766!3.16e-40!76;CL:0000557!1.29e-35!71;CL:0000839!1.78e-34!70;CL:0002009!2.35e-32!65;CL:0002194!4.43e-31!63;CL:0000576!4.43e-31!63;CL:0000040!4.43e-31!63;CL:0000559!4.43e-31!63;CL:0002057!2.44e-28!42;CL:0000860!7.42e-26!45;CL:0000945!1.75e-19!24;CL:0000826!1.75e-19!24;CL:0000542!1.09e-18!53;CL:0000051!1.09e-18!53;CL:0000838!5.18e-18!52;CL:0000236!1.06e-12!14;CL:0000134!7.67e-11!358;CL:0002320!9.32e-10!365;CL:0002393!6.50e-08!9;CL:0002397!6.50e-08!9;CL:0000094!1.04e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.14e-23;33!CL:0002057;5.14e-23;33!CL:0000576;5.48e-23;48!CL:0000945;1.90e-22;24!CL:0000473;5.38e-22;39!CL:0000234;5.38e-22;39!CL:0000766;3.55e-21;69!CL:0000763;3.73e-18;100!CL:0000738;7.70e-17;136!CL:0002087;1.03e-16;104!CL:0000988;9.48e-14;177!CL:0000236;1.07e-13;13!CL:0000542;7.24e-11;53!CL:0000094;1.02e-08;8!CL:0000451;6.53e-07;10 | |ontology_enrichment_celltype_v019=CL:0000860;5.14e-23;33!CL:0002057;5.14e-23;33!CL:0000576;5.48e-23;48!CL:0000945;1.90e-22;24!CL:0000473;5.38e-22;39!CL:0000234;5.38e-22;39!CL:0000766;3.55e-21;69!CL:0000763;3.73e-18;100!CL:0000738;7.70e-17;136!CL:0002087;1.03e-16;104!CL:0000988;9.48e-14;177!CL:0000236;1.07e-13;13!CL:0000542;7.24e-11;53!CL:0000094;1.02e-08;8!CL:0000451;6.53e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.51e-88,168;CL:0002032,1.48e-82,161;CL:0000837,1.48e-82,161;CL:0000988,1.00e-80,177;CL:0000738,2.32e-75,136;CL:0000763,3.30e-62,108;CL:0000049,3.30e-62,108;CL:0002031,8.05e-62,120;CL:0002087,3.95e-59,115;CL:0000766,9.26e-51,72;CL:0000557,3.18e-45,67;CL:0000839,7.74e-44,66;CL:0002009,2.07e-41,61;CL:0002194,6.69e-40,59;CL:0000576,6.69e-40,59;CL:0000040,6.69e-40,59;CL:0000559,6.69e-40,59;CL:0000473,6.23e-36,48;CL:0000234,6.23e-36,48;CL:0000860,9.58e-33,42;CL:0002057,9.58e-33,42;CL:0000945,2.00e-22,24;CL:0000826,2.00e-22,24;CL:0000542,4.32e-17,53;CL:0000051,4.32e-17,53;CL:0000838,2.32e-16,52;CL:0000134,1.30e-15,354;CL:0000236,1.60e-14,14;CL:0002320,1.86e-14,361;CL:0000219,1.48e-10,386;CL:0002393,5.88e-09,9;CL:0002397,5.88e-09,9;CL:0000094,1.02e-08,8;CL:0000451,5.94e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-23;42!CL:0000049;1.19e-16;108!CL:0000051;7.24e-11;53 | |ontology_enrichment_development_v019=CL:0002057;1.33e-23;42!CL:0000049;1.19e-16;108!CL:0000051;7.24e-11;53 | ||
|ontology_enrichment_disease=DOID:2531!5.82e-15!51;DOID:0060083!5.82e-15!51;DOID:1240!9.42e-12!39;DOID:8692!5.34e-11!31 | |ontology_enrichment_disease=DOID:2531!5.82e-15!51;DOID:0060083!5.82e-15!51;DOID:1240!9.42e-12!39;DOID:8692!5.34e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.69e-10;31!DOID:1240;1.03e-08;39!DOID:2531;2.91e-08;51!DOID:0060083;2.91e-08;51 | |ontology_enrichment_disease_v019=DOID:8692;4.69e-10;31!DOID:1240;1.03e-08;39!DOID:2531;2.91e-08;51!DOID:0060083;2.91e-08;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.63e-14,51;DOID:0060083,1.63e-14,51;DOID:1240,1.43e-10,39;DOID:8692,1.50e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.71e-41!102;UBERON:0003061!3.71e-41!102;UBERON:0002193!6.04e-38!112;UBERON:0002371!6.46e-31!80;UBERON:0007023!4.51e-30!115;UBERON:0001474!1.35e-26!86;UBERON:0002405!6.18e-25!115;UBERON:0004765!4.26e-19!101;UBERON:0001434!4.26e-19!101;UBERON:0001049!3.37e-10!57;UBERON:0005068!3.37e-10!57;UBERON:0006241!3.37e-10!57;UBERON:0007135!3.37e-10!57;UBERON:0003080!5.37e-09!42;UBERON:0002780!6.77e-09!41;UBERON:0001890!6.77e-09!41;UBERON:0006240!6.77e-09!41;UBERON:0000178!1.28e-08!15;UBERON:0000179!1.28e-08!15;UBERON:0000463!1.28e-08!15;UBERON:0002384!1.38e-08!375;UBERON:0002616!1.72e-07!59;UBERON:0002020!1.75e-07!34;UBERON:0003528!1.75e-07!34;UBERON:0001893!2.20e-07!34;UBERON:0002791!3.35e-07!33;UBERON:0003081!8.48e-07!216;UBERON:0001869!8.95e-07!32 | |ontology_enrichment_uberon=UBERON:0002390!3.71e-41!102;UBERON:0003061!3.71e-41!102;UBERON:0002193!6.04e-38!112;UBERON:0002371!6.46e-31!80;UBERON:0007023!4.51e-30!115;UBERON:0001474!1.35e-26!86;UBERON:0002405!6.18e-25!115;UBERON:0004765!4.26e-19!101;UBERON:0001434!4.26e-19!101;UBERON:0001049!3.37e-10!57;UBERON:0005068!3.37e-10!57;UBERON:0006241!3.37e-10!57;UBERON:0007135!3.37e-10!57;UBERON:0003080!5.37e-09!42;UBERON:0002780!6.77e-09!41;UBERON:0001890!6.77e-09!41;UBERON:0006240!6.77e-09!41;UBERON:0000178!1.28e-08!15;UBERON:0000179!1.28e-08!15;UBERON:0000463!1.28e-08!15;UBERON:0002384!1.38e-08!375;UBERON:0002616!1.72e-07!59;UBERON:0002020!1.75e-07!34;UBERON:0003528!1.75e-07!34;UBERON:0001893!2.20e-07!34;UBERON:0002791!3.35e-07!33;UBERON:0003081!8.48e-07!216;UBERON:0001869!8.95e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.33e-08;15!UBERON:0000179;2.33e-08;15!UBERON:0000463;2.33e-08;15!UBERON:0002390;6.42e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.33e-08;15!UBERON:0000179;2.33e-08;15!UBERON:0000463;2.33e-08;15!UBERON:0002390;6.42e-07;32 | ||
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| ||
|short_description=p2@LRMP | |short_description=p2@LRMP | ||
}} | }} |
Revision as of 11:18, 19 November 2012
Short description: | p2@LRMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LRMP_5end |
Coexpression cluster: | C2203_non_Neutrophils_Eosinophils_lymphoma_CD19_Whole_Burkitt |
Association with transcript: | 0bp_to_ENST00000554942_5end |
EntrezGene: | LRMP |
HGNC: | 6690 |
UniProt: | G3V2F6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.44e-50 | 98 |
blood island | 1.44e-50 | 98 |
hemolymphoid system | 1.29e-45 | 108 |
bone marrow | 6.92e-40 | 76 |
immune system | 1.04e-37 | 93 |
bone element | 6.21e-35 | 82 |
skeletal element | 2.02e-29 | 90 |
skeletal system | 9.89e-25 | 100 |
adult organism | 3.56e-23 | 114 |
connective tissue | 6.52e-13 | 371 |
lateral plate mesoderm | 1.21e-12 | 203 |
neural tube | 1.56e-08 | 56 |
neural rod | 1.56e-08 | 56 |
future spinal cord | 1.56e-08 | 56 |
neural keel | 1.56e-08 | 56 |
blood | 2.37e-08 | 15 |
haemolymphatic fluid | 2.37e-08 | 15 |
organism substance | 2.37e-08 | 15 |
regional part of nervous system | 4.18e-08 | 53 |
regional part of brain | 4.18e-08 | 53 |
tissue | 4.52e-08 | 773 |
regional part of forebrain | 9.50e-08 | 41 |
forebrain | 9.50e-08 | 41 |
anterior neural tube | 9.50e-08 | 41 |
future forebrain | 9.50e-08 | 41 |
brain grey matter | 1.05e-07 | 34 |
gray matter | 1.05e-07 | 34 |
telencephalon | 1.35e-07 | 34 |
musculoskeletal system | 1.79e-07 | 167 |
regional part of telencephalon | 4.61e-07 | 32 |
cerebral hemisphere | 6.60e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.63e-14 | 51 |
immune system cancer | 1.63e-14 | 51 |
leukemia | 1.43e-10 | 39 |
myeloid leukemia | 1.50e-10 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.