FFCP PHASE1:Hg19::chr5:134370033..134370042,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!6.69e-23!254;CL:0000223!1.41e-17!59;CL:0002076!5.20e-17!43;CL:0002251!2.42e-08!21;CL:0002368!5.12e-08!13;CL:0000082!9.68e-07!19 | |ontology_enrichment_celltype=CL:0000066!6.69e-23!254;CL:0000223!1.41e-17!59;CL:0002076!5.20e-17!43;CL:0002251!2.42e-08!21;CL:0002368!5.12e-08!13;CL:0000082!9.68e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002202;1.88e-13;9!CL:0002632;1.88e-13;9!CL:0002368;1.41e-11;13!CL:0002076;1.81e-09;42!CL:0000307;3.86e-09;3 | |ontology_enrichment_celltype_v019=CL:0002202;1.88e-13;9!CL:0002632;1.88e-13;9!CL:0002368;1.41e-11;13!CL:0002076;1.81e-09;42!CL:0000307;3.86e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.05e-13,9;CL:0002632,1.05e-13,9;CL:0002076,1.28e-13,42;CL:0002368,8.70e-12,13;CL:0000223,5.39e-10,58;CL:0000066,8.37e-10,253;CL:0000068,4.81e-09,3;CL:0000069,4.81e-09,3;CL:0000307,4.81e-09,3;CL:0000377,4.81e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000377;3.86e-09;3 | |ontology_enrichment_development_v019=CL:0000377;3.86e-09;3 | ||
|ontology_enrichment_disease=DOID:0050687!9.30e-37!143;DOID:162!4.52e-36!235;DOID:14566!4.42e-35!239;DOID:305!5.60e-33!106;DOID:0050686!3.11e-08!137;DOID:1749!5.70e-08!14 | |ontology_enrichment_disease=DOID:0050687!9.30e-37!143;DOID:162!4.52e-36!235;DOID:14566!4.42e-35!239;DOID:305!5.60e-33!106;DOID:0050686!3.11e-08!137;DOID:1749!5.70e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.51e-10;14 | |ontology_enrichment_disease_v019=DOID:1749;1.51e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.76e-12,106;DOID:1749,1.52e-10,14;DOID:0050687,5.99e-09,143;DOID:162,9.84e-08,235;DOID:14566,2.21e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.57e-25!169;UBERON:0000925!1.57e-25!169;UBERON:0006595!1.57e-25!169;UBERON:0001007!2.00e-23!155;UBERON:0001555!2.00e-23!155;UBERON:0007026!2.00e-23!155;UBERON:0004921!2.55e-22!129;UBERON:0004185!2.55e-22!129;UBERON:0000077!1.72e-18!130;UBERON:0001004!1.47e-14!72;UBERON:0001041!5.94e-14!98;UBERON:0008947!1.05e-12!38;UBERON:0003258!1.05e-12!38;UBERON:0000065!1.58e-12!53;UBERON:0000072!5.24e-12!46;UBERON:0005911!3.98e-11!82;UBERON:0005153!1.22e-10!37;UBERON:0000161!1.38e-10!35;UBERON:0003104!9.38e-10!238;UBERON:0009142!9.38e-10!238;UBERON:0000344!2.59e-08!12;UBERON:0005178!3.43e-08!34;UBERON:0002224!3.43e-08!34;UBERON:0001737!6.90e-08!9;UBERON:0005181!1.02e-07!35;UBERON:0005157!1.72e-07!51;UBERON:0001046!2.93e-07!19;UBERON:0000162!6.40e-07!14;UBERON:0001353!6.40e-07!14;UBERON:0000163!6.40e-07!14;UBERON:0006866!6.40e-07!14;UBERON:0000164!6.40e-07!14;UBERON:0000931!6.40e-07!14;UBERON:0004802!9.68e-07!19;UBERON:0000115!9.68e-07!19 | |ontology_enrichment_uberon=UBERON:0004119!1.57e-25!169;UBERON:0000925!1.57e-25!169;UBERON:0006595!1.57e-25!169;UBERON:0001007!2.00e-23!155;UBERON:0001555!2.00e-23!155;UBERON:0007026!2.00e-23!155;UBERON:0004921!2.55e-22!129;UBERON:0004185!2.55e-22!129;UBERON:0000077!1.72e-18!130;UBERON:0001004!1.47e-14!72;UBERON:0001041!5.94e-14!98;UBERON:0008947!1.05e-12!38;UBERON:0003258!1.05e-12!38;UBERON:0000065!1.58e-12!53;UBERON:0000072!5.24e-12!46;UBERON:0005911!3.98e-11!82;UBERON:0005153!1.22e-10!37;UBERON:0000161!1.38e-10!35;UBERON:0003104!9.38e-10!238;UBERON:0009142!9.38e-10!238;UBERON:0000344!2.59e-08!12;UBERON:0005178!3.43e-08!34;UBERON:0002224!3.43e-08!34;UBERON:0001737!6.90e-08!9;UBERON:0005181!1.02e-07!35;UBERON:0005157!1.72e-07!51;UBERON:0001046!2.93e-07!19;UBERON:0000162!6.40e-07!14;UBERON:0001353!6.40e-07!14;UBERON:0000163!6.40e-07!14;UBERON:0006866!6.40e-07!14;UBERON:0000164!6.40e-07!14;UBERON:0000931!6.40e-07!14;UBERON:0004802!9.68e-07!19;UBERON:0000115!9.68e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.16e-12;9!UBERON:0001557;1.16e-12;9!UBERON:0007196;7.74e-10;15!UBERON:0001558;7.74e-10;15!UBERON:0000072;1.38e-09;37!UBERON:0000065;4.31e-09;44!UBERON:0000485;4.78e-09;7!UBERON:0001043;1.47e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.16e-12;9!UBERON:0001557;1.16e-12;9!UBERON:0007196;7.74e-10;15!UBERON:0001558;7.74e-10;15!UBERON:0000072;1.38e-09;37!UBERON:0000065;4.31e-09;44!UBERON:0000485;4.78e-09;7!UBERON:0001043;1.47e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,5.04e-15,118;UBERON:0001007,1.77e-13,145;UBERON:0001555,1.77e-13,145;UBERON:0007026,1.77e-13,145;UBERON:0004119,3.31e-13,160;UBERON:0000925,3.31e-13,160;UBERON:0006595,3.31e-13,160;UBERON:0001737,6.31e-13,9;UBERON:0001004,1.91e-12,74;UBERON:0000072,1.29e-11,47;UBERON:0008947,1.64e-11,38;UBERON:0003258,1.64e-11,38;UBERON:0001041,4.61e-11,87;UBERON:0000065,6.88e-11,54;UBERON:0007196,7.50e-10,15;UBERON:0001558,7.50e-10,15;UBERON:0000161,2.02e-09,36;UBERON:0001557,2.03e-09,19;UBERON:0001043,9.33e-09,3;UBERON:0009143,9.33e-09,3;UBERON:0001046,3.08e-07,19;UBERON:0000485,4.64e-07,9;UBERON:0005178,5.24e-07,34;UBERON:0002224,5.24e-07,34;UBERON:0005181,9.65e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0.919421224478927,1.8072355126695,1.84877005083394,0.542270404062111,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.50401373190767,1.59331170856906,0.795285947051099,0.973269740605272,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0.612975591598039,0.300476117813194,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0.323292113637624,0,0,0.169560592310488,1.54608682530637,0.818238361772504,0,0,0,0,0.207322110030741,0,0,0,1.28648187638577,0,0,0,1.77460200059766,1.51726221070292,1.20505514941741,1.7647035637183,1.74303555273925,1.42362371466658,1.48314438976181,0.98110732562673,0.769494313892781,0,0,0,0,0,0,0,0,0.983907508344908,0,0.109750285408626,0,0.100528972411631,0.925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,2.81201501960331,0.839910640994298,0.567100388969546,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,1.0656887160644,0.857867961948885,3.7983512377401,2.46972101034231,0,0,0,0.301439377059586,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0.802025881213139,3.68323955743585,1.14814448164607,0,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,0,1.09883357782012,0.495056999523528,0.574265537996172,0.650060246036521,0,0.676695028044854,0,0,0,0.537101224341368,0.145016693914229,0,0.267096106940212,0.495854746082934,0.768760269460425,0.127612712494584,1.51736671283325,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.719489830333259,0.274537029736055,0.942499218765491,0,0,0,1.95053495635836,0,0,0.136499911407986,1.97967604735198,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.845086807596724,0.143411352204052,0.687743287091848,0.35667105148125,0.354761064070598,0.633322905892992,0.658589785919804,0,0,1.34710957815717,4.69211592875051,3.26672954583968,0,0.43050537267123,1.68471475667626,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0.854592569019785,0.962479855263359,1.22520107990516,0.929015875628594,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,1.72347885350326,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,1.08182271390393,0.99921590399346,0,0.935702702041099,0.146508179271894,0.121360521749513,0,1.42068073403207,0,0,0,0,0,0.445234820091624,0,1.90012867315194,0,0.828851746593443,0,0.409074730008619,0,0,0.808815160325942,2.32727527078292,4.09257896181497,1.38100767891707,0,0,0,0,0,0.260427761085233,1.22443999994674,0,0,1.5255219017566,0.236387681767936,0.344743373241465,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0.32681539055697,1.95193241990045,0.846452843541768,0,0.69169171316418,0.628303510868405,0.217294743844016,0,0.274792780205587,0,0,0,0.332423363800313,0.676786981851542,0.784250137270958,0.839107934879214,0.189753732724185,0,0,0,1.55488378577335,1.08194319871046,0,0.176915129006678,0,0,0,0,0,0,0,2.55436704901932,0.782658475728359,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0.622129148383483,0,0,0.313932918407225,0,0,0.416024019039416,0.173559738335131,1.17590876897253,0.435296032902013,0.17472666824203,0.859930162358083,1.64485763191445,2.48503678093031,1.14961639874493,3.58859361007152,0,0.677942222341597,0.411125773940253,0.397429223405979,0,0.586654148204409,0.240476460754601,0,0.19980960958213,0.72045208577053,0.114536596165916,0.343189995723929,0.288109595976299,0.248505071130865,4.9495747269527,0.815425236441684,0.941425616810999,0.917983958726896,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,2.32991899054908,0.630265458457789,0.906574442192831,0.674035438541849,0.590564889088493,0,0,0,0,0,0,0,0.77380195455795,0,1.67717343799633,0,0,0.739202355635845,0.717149357331379,0.767660789277781,0,0,0,0,0.864221491201268,0,0,2.46277562248017,0,0.453248366080503,0,0,0,0,0.342173675768659,0.704815022316672,0.106787412567695,0,0,0,0.197611631897944,0,3.19170628885091,0,0,0,0,0.785270481251171,0,0,0,0,0.221858103073705,0.0620964029413835,0.415045904808692,0.74988244777264,0,0,2.35265819698172,0.468334905806882,0.28984205722165,0.149254802886874,0,0,0.378806010550178,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0.521745061811734,0.450772826991655,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0.782982875895635,1.13352962756136,0.694567422971502,0.734210113519403,0,0.926404341482917,0.438568099157414,1.06013487567529,0.38582807654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| ||
|short_description=p5@PITX1 | |short_description=p5@PITX1 | ||
}} | }} |
Revision as of 01:14, 21 November 2012
Short description: | p5@PITX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_PITX1_5end |
Coexpression cluster: | C4464_anaplastic_Prostate_esophagus_Smooth_glassy_cervical_biphenotypic |
Association with transcript: | -45bp_to_ENST00000265340_5end |
EntrezGene: | PITX1 |
HGNC: | 9004 |
UniProt: | P78337 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.05e-13 | 9 |
epithelial cell of lower respiratory tract | 1.05e-13 | 9 |
endo-epithelial cell | 1.28e-13 | 42 |
respiratory epithelial cell | 8.70e-12 | 13 |
endodermal cell | 5.39e-10 | 58 |
epithelial cell | 8.37e-10 | 253 |
duct epithelial cell | 4.81e-09 | 3 |
branched duct epithelial cell | 4.81e-09 | 3 |
tracheal epithelial cell | 4.81e-09 | 3 |
tracheoblast | 4.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 5.04e-15 | 118 |
digestive system | 1.77e-13 | 145 |
digestive tract | 1.77e-13 | 145 |
primitive gut | 1.77e-13 | 145 |
endoderm-derived structure | 3.31e-13 | 160 |
endoderm | 3.31e-13 | 160 |
presumptive endoderm | 3.31e-13 | 160 |
larynx | 6.31e-13 | 9 |
respiratory system | 1.91e-12 | 74 |
segment of respiratory tract | 1.29e-11 | 47 |
respiratory primordium | 1.64e-11 | 38 |
endoderm of foregut | 1.64e-11 | 38 |
foregut | 4.61e-11 | 87 |
respiratory tract | 6.88e-11 | 54 |
tracheobronchial tree | 7.50e-10 | 15 |
lower respiratory tract | 7.50e-10 | 15 |
orifice | 2.02e-09 | 36 |
upper respiratory tract | 2.03e-09 | 19 |
esophagus | 9.33e-09 | 3 |
esophageal region | 9.33e-09 | 3 |
hindgut | 3.08e-07 | 19 |
simple columnar epithelium | 4.64e-07 | 9 |
thoracic cavity element | 5.24e-07 | 34 |
thoracic cavity | 5.24e-07 | 34 |
thoracic segment organ | 9.65e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.76e-12 | 106 |
squamous cell carcinoma | 1.52e-10 | 14 |
cell type cancer | 5.99e-09 | 143 |
cancer | 9.84e-08 | 235 |
disease of cellular proliferation | 2.21e-07 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.