FFCP PHASE1:Hg19::chr7:46608530..46608534,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=N | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
Revision as of 10:57, 10 July 2013
| Short description: | p@chr7:46608530..46608534, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr7:46608530..46608534, + |
| Coexpression cluster: | C513_Tracheal_Bronchial_squamous_bronchial_Small_oral_medulloblastoma |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr7:46608530..46608534+ |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| bronchial epithelial cell | 8.04e-23 | 3 |
| respiratory epithelial cell | 1.28e-20 | 13 |
| epithelial cell of tracheobronchial tree | 3.16e-17 | 9 |
| epithelial cell of lower respiratory tract | 3.16e-17 | 9 |
| endodermal cell | 4.47e-10 | 58 |
| endo-epithelial cell | 6.42e-10 | 42 |
| endothelial cell of sinusoid | 1.71e-09 | 2 |
| endothelial cell of hepatic sinusoid | 1.71e-09 | 2 |
| epithelial cell | 5.35e-07 | 253 |
| duct epithelial cell | 5.80e-07 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| lower respiratory tract epithelium | 8.04e-23 | 3 |
| epithelium of bronchus | 8.04e-23 | 3 |
| thyroid gland | 2.95e-14 | 5 |
| pharyngeal pouch | 2.95e-14 | 5 |
| thyroid diverticulum | 2.95e-14 | 5 |
| pharyngeal pouch 2 | 2.95e-14 | 5 |
| thyroid primordium | 2.95e-14 | 5 |
| bronchus | 4.11e-14 | 5 |
| tracheobronchial tree | 1.36e-10 | 15 |
| lower respiratory tract | 1.36e-10 | 15 |
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 2.32e-19 | 14 |
| papillary adenocarcinoma | 8.72e-18 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
